RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SHTN1A0MZ66 631 aa24.96■■□□□ 1.59
USP6NL-204ENST00000606752 MMP1P03956 469 aa24.96■■□□□ 1.59
USP6NL-204ENST00000606752 U2AF2P26368 475 aaKnown RBP eCLIP24.96■■□□□ 1.591e-6■■■■■ 27
USP6NL-204ENST00000606752 SAFBQ15424 915 aaKnown RBP eCLIP24.96■■□□□ 1.59
USP6NL-204ENST00000606752 NBPF9Q3BBW0 867 aa24.96■■□□□ 1.59
USP6NL-204ENST00000606752 CLIP2Q9UDT6 1046 aa24.96■■□□□ 1.59
USP6NL-204ENST00000606752 GJA3Q9Y6H8 435 aa24.96■■□□□ 1.59
USP6NL-204ENST00000606752 CNTNAP1P78357 1384 aa24.96■■□□□ 1.59
USP6NL-204ENST00000606752 GNL2Q13823 731 aaKnown RBP24.96■■□□□ 1.59
USP6NL-204ENST00000606752 MTMR7Q9Y216 660 aa24.96■■□□□ 1.59
USP6NL-204ENST00000606752 hCG_1642624A0A1W2PR95 340 aa24.95■■□□□ 1.58
USP6NL-204ENST00000606752 PARP1P09874 1014 aaKnown RBP24.95■■□□□ 1.58
USP6NL-204ENST00000606752 LMNB1P20700 586 aa24.95■■□□□ 1.58
USP6NL-204ENST00000606752 MYSM1Q5VVJ2 828 aa24.95■■□□□ 1.58
USP6NL-204ENST00000606752 CAVIN1Q6NZI2 390 aaKnown RBP24.95■■□□□ 1.58
USP6NL-204ENST00000606752 USP28Q96RU2 1077 aa24.95■■□□□ 1.58
USP6NL-204ENST00000606752 SYT17Q9BSW7 474 aa24.95■■□□□ 1.58
USP6NL-204ENST00000606752 RCOR1Q9UKL0 485 aa24.95■■□□□ 1.58
USP6NL-204ENST00000606752 SIPA1L1O43166 1804 aa24.95■■□□□ 1.58
USP6NL-204ENST00000606752 MICALL2Q8IY33 904 aa24.94■■□□□ 1.58
USP6NL-204ENST00000606752 CNOT7Q9UIV1 285 aaKnown RBP24.94■■□□□ 1.58
USP6NL-204ENST00000606752 KCNJ14Q9UNX9 436 aa24.94■■□□□ 1.58
USP6NL-204ENST00000606752 KLRF2D3W0D1 207 aa24.93■■□□□ 1.58
USP6NL-204ENST00000606752 PFKFB3Q16875 520 aaPredicted RBP24.93■■□□□ 1.58
USP6NL-204ENST00000606752 KANSL2Q9H9L4 492 aa24.93■■□□□ 1.58
USP6NL-204ENST00000606752 MYH8P13535 1937 aa24.93■■□□□ 1.58
USP6NL-204ENST00000606752 SCG2P13521 617 aa24.93■■□□□ 1.58
USP6NL-204ENST00000606752 SMARCA1P28370 1054 aa24.93■■□□□ 1.58
USP6NL-204ENST00000606752 RBM26Q5T8P6 1007 aaKnown RBP24.93■■□□□ 1.58
USP6NL-204ENST00000606752 USP17L2Q6R6M4 530 aa24.93■■□□□ 1.58
USP6NL-204ENST00000606752 TMEM179Q6ZVK1 233 aa24.93■■□□□ 1.58
USP6NL-204ENST00000606752 ILDR2Q71H61 639 aa24.93■■□□□ 1.58
USP6NL-204ENST00000606752 CLEC10AQ8IUN9 316 aa24.93■■□□□ 1.58
USP6NL-204ENST00000606752 FOXP1Q9H334 677 aaPredicted RBP24.93■■□□□ 1.58
USP6NL-204ENST00000606752 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.93■■□□□ 1.58
USP6NL-204ENST00000606752 RTEL1Q9NZ71 1219 aa24.93■■□□□ 1.58
USP6NL-204ENST00000606752 ZNF541Q9H0D2 1346 aa24.92■■□□□ 1.58
USP6NL-204ENST00000606752 GOLGA8HP0CJ92 632 aa24.92■■□□□ 1.58
USP6NL-204ENST00000606752 PDHBP11177 359 aa24.92■■□□□ 1.58
USP6NL-204ENST00000606752 CEBPZQ03701 1054 aaKnown RBP24.92■■□□□ 1.58
USP6NL-204ENST00000606752 ABCB5Q2M3G0 1257 aa24.92■■□□□ 1.58
USP6NL-204ENST00000606752 DIS3L2Q8IYB7 885 aaKnown RBP24.92■■□□□ 1.58
USP6NL-204ENST00000606752 LRRC47Q8N1G4 583 aaKnown RBP24.92■■□□□ 1.58
USP6NL-204ENST00000606752 VPS54Q9P1Q0 977 aa24.92■■□□□ 1.58
USP6NL-204ENST00000606752 NYAP2Q9P242 653 aa24.92■■□□□ 1.58
USP6NL-204ENST00000606752 BTBD18B2RXH4 712 aa24.91■■□□□ 1.58
USP6NL-204ENST00000606752 TNNI2P48788 182 aa24.91■■□□□ 1.58
USP6NL-204ENST00000606752 MKL1Q969V6 931 aa24.91■■□□□ 1.58
USP6NL-204ENST00000606752 PHF20Q9BVI0 1012 aa24.91■■□□□ 1.58
USP6NL-204ENST00000606752 SPZ1Q9BXG8 430 aa24.91■■□□□ 1.58
USP6NL-204ENST00000606752 TMEM39BQ9GZU3 492 aa24.91■■□□□ 1.58
USP6NL-204ENST00000606752 USP17L5A8MUK1 530 aa24.91■■□□□ 1.58
USP6NL-204ENST00000606752 SNHG28P0DPA3 235 aa24.91■■□□□ 1.58
USP6NL-204ENST00000606752 NOSTRINQ8IVI9 506 aa24.91■■□□□ 1.58
USP6NL-204ENST00000606752 SHISA4Q96DD7 197 aa24.91■■□□□ 1.58
USP6NL-204ENST00000606752 FTOQ9C0B1 505 aaKnown RBP eCLIP24.91■■□□□ 1.58
USP6NL-204ENST00000606752 CYTH3O43739 400 aa24.9■■□□□ 1.58
USP6NL-204ENST00000606752 TBC1D12O60347 775 aa24.9■■□□□ 1.58
USP6NL-204ENST00000606752 EGFRP00533 1210 aa24.9■■□□□ 1.58
USP6NL-204ENST00000606752 SLC35G1Q2M3R5 365 aa24.9■■□□□ 1.58
USP6NL-204ENST00000606752 ASPRV1Q53RT3 343 aa24.9■■□□□ 1.58
USP6NL-204ENST00000606752 POLR3EQ9NVU0 708 aa24.9■■□□□ 1.58
USP6NL-204ENST00000606752 GREB1LQ9C091 1923 aaPredicted RBP24.89■■□□□ 1.58
USP6NL-204ENST00000606752 GOLGA6L4A6NEF3 574 aa24.89■■□□□ 1.58
USP6NL-204ENST00000606752 ATP2B2Q01814 1243 aa24.89■■□□□ 1.58
USP6NL-204ENST00000606752 TNFAIP1Q13829 316 aa24.89■■□□□ 1.58
USP6NL-204ENST00000606752 SEPT2Q15019 361 aa24.89■■□□□ 1.58
USP6NL-204ENST00000606752 RASGRP2Q7LDG7 609 aa24.89■■□□□ 1.58
USP6NL-204ENST00000606752 SAMD7Q7Z3H4 446 aa24.89■■□□□ 1.58
USP6NL-204ENST00000606752 PIBF1Q8WXW3 757 aa24.89■■□□□ 1.58
USP6NL-204ENST00000606752 CABP5Q9NP86 173 aa24.89■■□□□ 1.58
USP6NL-204ENST00000606752 TMEM63CQ9P1W3 806 aa24.89■■□□□ 1.58
USP6NL-204ENST00000606752 PGAP2Q9UHJ9 254 aa24.89■■□□□ 1.58
USP6NL-204ENST00000606752 GDF11O95390 407 aa24.89■■□□□ 1.57
USP6NL-204ENST00000606752 EEF2P13639 858 aaKnown RBP24.89■■□□□ 1.57
USP6NL-204ENST00000606752 SHROOM1Q2M3G4 852 aaPredicted RBP24.89■■□□□ 1.57
USP6NL-204ENST00000606752 SYAP1Q96A49 352 aaPredicted RBP24.89■■□□□ 1.57
USP6NL-204ENST00000606752 H7C1D1 291 aa24.88■■□□□ 1.57
USP6NL-204ENST00000606752 TPRNQ4KMQ1 711 aa24.88■■□□□ 1.57
USP6NL-204ENST00000606752 SH3GLB2Q9NR46 395 aa24.88■■□□□ 1.57
USP6NL-204ENST00000606752 CLIC4Q9Y696 253 aa24.88■■□□□ 1.57
USP6NL-204ENST00000606752 MYH6P13533 1939 aa24.88■■□□□ 1.57
USP6NL-204ENST00000606752 BAZ2BQ9UIF8 2168 aaKnown RBP24.88■■□□□ 1.57
USP6NL-204ENST00000606752 YEATS4O95619 227 aa24.87■■□□□ 1.57
USP6NL-204ENST00000606752 GH2P01242 217 aa24.87■■□□□ 1.57
USP6NL-204ENST00000606752 VEGFAP15692 232 aaPredicted RBP24.87■■□□□ 1.57
USP6NL-204ENST00000606752 NASPP49321 788 aaPredicted RBP24.87■■□□□ 1.57
USP6NL-204ENST00000606752 ICA1Q05084 483 aa24.87■■□□□ 1.57
USP6NL-204ENST00000606752 RASA3Q14644 834 aa24.87■■□□□ 1.57
USP6NL-204ENST00000606752 RRP1BQ14684 758 aaKnown RBP24.87■■□□□ 1.57
USP6NL-204ENST00000606752 TBC1D10BQ4KMP7 808 aaPredicted RBP24.87■■□□□ 1.57
USP6NL-204ENST00000606752 SIAH1Q8IUQ4 282 aa24.87■■□□□ 1.57
USP6NL-204ENST00000606752 GPC2Q8N158 579 aa24.87■■□□□ 1.57
USP6NL-204ENST00000606752 LINC00301Q8NCQ3 95 aa24.87■■□□□ 1.57
USP6NL-204ENST00000606752 PGBD1Q96JS3 809 aa24.87■■□□□ 1.57
USP6NL-204ENST00000606752 BRMS1Q9HCU9 246 aa24.87■■□□□ 1.57
USP6NL-204ENST00000606752 KRT2P35908 639 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 KIF4BQ2VIQ3 1234 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 ZSCAN23Q3MJ62 389 aa24.86■■□□□ 1.57
USP6NL-204ENST00000606752 ANO1Q5XXA6 986 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms