RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 PORCNQ9H237 461 aa19.16■□□□□ 0.66
IRF3-210ENST00000595240 SH2D4AQ9H788 454 aa19.16■□□□□ 0.66
IRF3-210ENST00000595240 GJB1P08034 283 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 EEF2P13639 858 aaKnown RBP19.15■□□□□ 0.66
IRF3-210ENST00000595240 NUCB1Q02818 461 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 COG2Q14746 738 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 B4GALNT3Q6L9W6 998 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 CHD1LQ86WJ1 897 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 SOCS4Q8WXH5 440 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 SHISA4Q96DD7 197 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 RNF208Q9H0X6 261 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 UNC93B1Q9H1C4 597 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 VCPKMTQ9H867 229 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 MKNK2Q9HBH9 465 aa19.15■□□□□ 0.66
IRF3-210ENST00000595240 FOXP2O15409 715 aa19.14■□□□□ 0.65
IRF3-210ENST00000595240 GJA8P48165 433 aa19.14■□□□□ 0.65
IRF3-210ENST00000595240 TICAM2Q86XR7 235 aa19.14■□□□□ 0.65
IRF3-210ENST00000595240 SPICE1Q8N0Z3 855 aa19.14■□□□□ 0.65
IRF3-210ENST00000595240 NKX2-3Q8TAU0 364 aa19.14■□□□□ 0.65
IRF3-210ENST00000595240 TANGO6Q9C0B7 1094 aa19.14■□□□□ 0.65
IRF3-210ENST00000595240 HOXC10Q9NYD6 342 aa19.14■□□□□ 0.65
IRF3-210ENST00000595240 BTBD7Q9P203 1132 aa19.14■□□□□ 0.65
IRF3-210ENST00000595240 DOCK3Q8IZD9 2030 aa19.13■□□□□ 0.65
IRF3-210ENST00000595240 XRCC5P13010 732 aaKnown RBP19.13■□□□□ 0.65
IRF3-210ENST00000595240 CCNA1P78396 465 aa19.13■□□□□ 0.65
IRF3-210ENST00000595240 GPR142Q7Z601 462 aa19.13■□□□□ 0.65
IRF3-210ENST00000595240 PLEKHH3Q7Z736 793 aa19.13■□□□□ 0.65
IRF3-210ENST00000595240 CCAR1Q8IX12 1150 aaKnown RBP19.13■□□□□ 0.65
IRF3-210ENST00000595240 STK11IPQ8N1F8 1099 aa19.13■□□□□ 0.65
IRF3-210ENST00000595240 USP6NLQ92738 828 aa19.13■□□□□ 0.65
IRF3-210ENST00000595240 NUDT12Q9BQG2 462 aa19.13■□□□□ 0.65
IRF3-210ENST00000595240 ZNF287Q9HBT7 754 aa19.13■□□□□ 0.65
IRF3-210ENST00000595240 WDR46O15213 610 aaKnown RBP19.12■□□□□ 0.65
IRF3-210ENST00000595240 HMGCRP04035 888 aa19.12■□□□□ 0.65
IRF3-210ENST00000595240 ATP2B2Q01814 1243 aa19.12■□□□□ 0.65
IRF3-210ENST00000595240 MORN1Q5T089 497 aa19.12■□□□□ 0.65
IRF3-210ENST00000595240 PRPF38BQ5VTL8 546 aaKnown RBP19.12■□□□□ 0.65
IRF3-210ENST00000595240 CCDC129Q6ZRS4 1044 aa19.12■□□□□ 0.65
IRF3-210ENST00000595240 NAPBQ9H115 298 aa19.12■□□□□ 0.65
IRF3-210ENST00000595240 MYH8P13535 1937 aa19.12■□□□□ 0.65
IRF3-210ENST00000595240 IGKV6D-41A0A0C4DH26 115 aa19.11■□□□□ 0.65
IRF3-210ENST00000595240 CYP2B6P20813 491 aa19.11■□□□□ 0.65
IRF3-210ENST00000595240 PLEKHM2Q8IWE5 1019 aa19.11■□□□□ 0.65
IRF3-210ENST00000595240 TRIB2Q92519 343 aa19.11■□□□□ 0.65
IRF3-210ENST00000595240 OSBPL3Q9H4L5 887 aa19.11■□□□□ 0.65
IRF3-210ENST00000595240 PAK6Q9NQU5 681 aaPredicted RBP19.11■□□□□ 0.65
IRF3-210ENST00000595240 HELLSQ9NRZ9 838 aa19.11■□□□□ 0.65
IRF3-210ENST00000595240 PLXNB2O15031 1838 aa19.1■□□□□ 0.65
IRF3-210ENST00000595240 PRDM1O75626 825 aa19.1■□□□□ 0.65
IRF3-210ENST00000595240 FLOT1O75955 427 aa19.1■□□□□ 0.65
IRF3-210ENST00000595240 DSG3P32926 999 aa19.1■□□□□ 0.65
IRF3-210ENST00000595240 PPARAQ07869 468 aa19.1■□□□□ 0.65
IRF3-210ENST00000595240 ZNF444Q8N0Y2 327 aaPredicted RBP19.1■□□□□ 0.65
IRF3-210ENST00000595240 MB21D1Q8N884 522 aa19.1■□□□□ 0.65
IRF3-210ENST00000595240 U2AF1L4Q8WU68 220 aaKnown RBP19.1■□□□□ 0.65
IRF3-210ENST00000595240 FAM227BQ96M60 508 aa19.1■□□□□ 0.65
IRF3-210ENST00000595240 GOPCQ9HD26 462 aa19.1■□□□□ 0.65
IRF3-210ENST00000595240 NYAP2Q9P242 653 aa19.1■□□□□ 0.65
IRF3-210ENST00000595240 GREB1LQ9C091 1923 aaPredicted RBP19.1■□□□□ 0.65
IRF3-210ENST00000595240 SGPL1O95470 568 aa19.09■□□□□ 0.65
IRF3-210ENST00000595240 RGS2P41220 211 aa19.09■□□□□ 0.65
IRF3-210ENST00000595240 TRIM32Q13049 653 aa19.09■□□□□ 0.65
IRF3-210ENST00000595240 VPS53Q5VIR6 699 aa19.09■□□□□ 0.65
IRF3-210ENST00000595240 UBE2Q1Q7Z7E8 422 aa19.09■□□□□ 0.65
IRF3-210ENST00000595240 PLIN4Q96Q06 1357 aa19.08■□□□□ 0.65
IRF3-210ENST00000595240 A0A0D9SFI3 127 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 SLC15A5A6NIM6 579 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 TRIM6-TRIM34B2RNG4 842 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 SLC3A2P08195 630 aaKnown RBP19.08■□□□□ 0.64
IRF3-210ENST00000595240 PTPREP23469 700 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 PDE4BQ07343 736 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 MAP2K5Q13163 448 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 MCMDC2Q4G0Z9 681 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 MAP3K21Q5TCX8 1036 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 TRMT44Q8IYL2 757 aaKnown RBP19.08■□□□□ 0.64
IRF3-210ENST00000595240 ATG4CQ96DT6 458 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 DEFB118Q96PH6 123 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 APBA2Q99767 749 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 MOV10L1Q9BXT6 1211 aaKnown RBP19.08■□□□□ 0.64
IRF3-210ENST00000595240 SPATC1LQ9H0A9 340 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.08■□□□□ 0.643e-11■■■□□ 15.6
IRF3-210ENST00000595240 CWC22Q9HCG8 908 aaKnown RBP19.08■□□□□ 0.64
IRF3-210ENST00000595240 ADAMTS5Q9UNA0 930 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 RLFQ13129 1914 aa19.08■□□□□ 0.64
IRF3-210ENST00000595240 ZKSCAN1P17029 563 aaPredicted RBP19.07■□□□□ 0.64
IRF3-210ENST00000595240 CAPN2P17655 700 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 GRB14Q14449 540 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 ALX1Q15699 326 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 WDR78Q5VTH9 848 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 SHCBP1Q8NEM2 672 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 NEDD1Q8NHV4 660 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 RILPL2Q969X0 211 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 CEP95Q96GE4 821 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 CRISPLD2Q9H0B8 497 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 FBXO28Q9NVF7 368 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 MTMR4Q9NYA4 1195 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 SYNPO2Q9UMS6 1093 aa19.07■□□□□ 0.64
IRF3-210ENST00000595240 RPTORQ8N122 1335 aa19.06■□□□□ 0.64
IRF3-210ENST00000595240 A0A0G2JMZ2 1700 aa19.06■□□□□ 0.64
IRF3-210ENST00000595240 F5H6K3 240 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms