RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 CHD1LQ86WJ1 897 aa24.14■■□□□ 1.45
CIRBP-239ENST00000592467 SHISA4Q96DD7 197 aa24.14■■□□□ 1.45
CIRBP-239ENST00000592467 BTBD7Q9P203 1132 aa24.14■■□□□ 1.45
CIRBP-239ENST00000592467 CCL5P13501 91 aa24.13■■□□□ 1.45
CIRBP-239ENST00000592467 EEF2P13639 858 aaKnown RBP24.13■■□□□ 1.45
CIRBP-239ENST00000592467 PLEKHM2Q8IWE5 1019 aa24.13■■□□□ 1.45
CIRBP-239ENST00000592467 USP6NLQ92738 828 aa24.13■■□□□ 1.45
CIRBP-239ENST00000592467 PAGR1Q9BTK6 254 aa24.13■■□□□ 1.45
CIRBP-239ENST00000592467 OSBPL3Q9H4L5 887 aa24.13■■□□□ 1.45
CIRBP-239ENST00000592467 VCPKMTQ9H867 229 aa24.13■■□□□ 1.45
CIRBP-239ENST00000592467 ARHGEF10LQ9HCE6 1279 aa24.13■■□□□ 1.45
CIRBP-239ENST00000592467 IGKV6D-41A0A0C4DH26 115 aa24.12■■□□□ 1.45
CIRBP-239ENST00000592467 INHAP05111 366 aa24.12■■□□□ 1.45
CIRBP-239ENST00000592467 TDO2P48775 406 aa24.12■■□□□ 1.45
CIRBP-239ENST00000592467 STK11IPQ8N1F8 1099 aa24.12■■□□□ 1.45
CIRBP-239ENST00000592467 LPAR1Q92633 364 aa24.12■■□□□ 1.45
CIRBP-239ENST00000592467 KANSL2Q9H9L4 492 aa24.12■■□□□ 1.45
CIRBP-239ENST00000592467 APPP05067 770 aa24.11■■□□□ 1.45
CIRBP-239ENST00000592467 MAPK4P31152 587 aa24.11■■□□□ 1.45
CIRBP-239ENST00000592467 UNC93B1Q9H1C4 597 aa24.11■■□□□ 1.45
CIRBP-239ENST00000592467 MYH4Q9Y623 1939 aa24.1■■□□□ 1.45
CIRBP-239ENST00000592467 GJB1P08034 283 aa24.1■■□□□ 1.45
CIRBP-239ENST00000592467 UBXN2AP68543 259 aa24.1■■□□□ 1.45
CIRBP-239ENST00000592467 COG2Q14746 738 aa24.1■■□□□ 1.45
CIRBP-239ENST00000592467 MORN1Q5T089 497 aa24.1■■□□□ 1.45
CIRBP-239ENST00000592467 VPS53Q5VIR6 699 aa24.1■■□□□ 1.45
CIRBP-239ENST00000592467 GPR142Q7Z601 462 aa24.1■■□□□ 1.45
CIRBP-239ENST00000592467 TICAM2Q86XR7 235 aa24.1■■□□□ 1.45
CIRBP-239ENST00000592467 SPICE1Q8N0Z3 855 aa24.1■■□□□ 1.45
CIRBP-239ENST00000592467 FAM227BQ96M60 508 aa24.1■■□□□ 1.45
CIRBP-239ENST00000592467 COL11A1P12107 1806 aaPredicted RBP24.1■■□□□ 1.45
CIRBP-239ENST00000592467 A0A0D9SFI3 127 aa24.09■■□□□ 1.45
CIRBP-239ENST00000592467 GJA8P48165 433 aa24.09■■□□□ 1.45
CIRBP-239ENST00000592467 RNF208Q9H0X6 261 aa24.09■■□□□ 1.45
CIRBP-239ENST00000592467 SH2D4AQ9H788 454 aa24.09■■□□□ 1.45
CIRBP-239ENST00000592467 MKNK2Q9HBH9 465 aa24.09■■□□□ 1.45
CIRBP-239ENST00000592467 HELLSQ9NRZ9 838 aa24.09■■□□□ 1.45
CIRBP-239ENST00000592467 BIN2Q9UBW5 565 aaPredicted RBP24.09■■□□□ 1.45
CIRBP-239ENST00000592467 PRDM1O75626 825 aa24.08■■□□□ 1.45
CIRBP-239ENST00000592467 TRIM32Q13049 653 aa24.08■■□□□ 1.45
CIRBP-239ENST00000592467 TRIB2Q92519 343 aa24.08■■□□□ 1.45
CIRBP-239ENST00000592467 NACAP1Q9BZK3 213 aa24.08■■□□□ 1.45
CIRBP-239ENST00000592467 TANGO6Q9C0B7 1094 aa24.08■■□□□ 1.45
CIRBP-239ENST00000592467 TACC3Q9Y6A5 838 aa24.08■■□□□ 1.45
CIRBP-239ENST00000592467 PLIN4Q96Q06 1357 aa24.07■■□□□ 1.44
CIRBP-239ENST00000592467 WDR46O15213 610 aaKnown RBP24.07■■□□□ 1.44
CIRBP-239ENST00000592467 XRCC5P13010 732 aaKnown RBP24.07■■□□□ 1.44
CIRBP-239ENST00000592467 DSG3P32926 999 aa24.07■■□□□ 1.44
CIRBP-239ENST00000592467 IRX6P78412 446 aaPredicted RBP24.07■■□□□ 1.44
CIRBP-239ENST00000592467 PPARAQ07869 468 aa24.07■■□□□ 1.44
CIRBP-239ENST00000592467 PLEKHH3Q7Z736 793 aa24.07■■□□□ 1.44
CIRBP-239ENST00000592467 UBE2Q1Q7Z7E8 422 aa24.07■■□□□ 1.44
CIRBP-239ENST00000592467 SOCS4Q8WXH5 440 aa24.07■■□□□ 1.44
CIRBP-239ENST00000592467 NUDT12Q9BQG2 462 aa24.07■■□□□ 1.44
CIRBP-239ENST00000592467 NAPBQ9H115 298 aa24.07■■□□□ 1.44
CIRBP-239ENST00000592467 PAK6Q9NQU5 681 aaPredicted RBP24.07■■□□□ 1.44
CIRBP-239ENST00000592467 HOXC10Q9NYD6 342 aa24.07■■□□□ 1.44
CIRBP-239ENST00000592467 NYAP2Q9P242 653 aa24.07■■□□□ 1.44
CIRBP-239ENST00000592467 ZNF236Q9UL36 1845 aa24.06■■□□□ 1.44
CIRBP-239ENST00000592467 CYP2B6P20813 491 aa24.06■■□□□ 1.44
CIRBP-239ENST00000592467 ADAMTS5Q9UNA0 930 aa24.06■■□□□ 1.44
CIRBP-239ENST00000592467 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.06■■□□□ 1.44
CIRBP-239ENST00000592467 HMGCRP04035 888 aa24.05■■□□□ 1.44
CIRBP-239ENST00000592467 ATP2B2Q01814 1243 aa24.05■■□□□ 1.44
CIRBP-239ENST00000592467 NMIQ13287 307 aaPredicted RBP24.05■■□□□ 1.44
CIRBP-239ENST00000592467 ALX1Q15699 326 aa24.05■■□□□ 1.44
CIRBP-239ENST00000592467 ZNF589Q86UQ0 364 aaPredicted RBP24.05■■□□□ 1.44
CIRBP-239ENST00000592467 ATG4CQ96DT6 458 aa24.05■■□□□ 1.44
CIRBP-239ENST00000592467 PDE4AP27815 886 aa24.04■■□□□ 1.44
CIRBP-239ENST00000592467 CCNA1P78396 465 aa24.04■■□□□ 1.44
CIRBP-239ENST00000592467 MCMDC2Q4G0Z9 681 aa24.04■■□□□ 1.44
CIRBP-239ENST00000592467 MAP3K21Q5TCX8 1036 aa24.04■■□□□ 1.44
CIRBP-239ENST00000592467 ZNF444Q8N0Y2 327 aaPredicted RBP24.04■■□□□ 1.44
CIRBP-239ENST00000592467 NEDD1Q8NHV4 660 aa24.04■■□□□ 1.44
CIRBP-239ENST00000592467 NKX2-3Q8TAU0 364 aa24.04■■□□□ 1.44
CIRBP-239ENST00000592467 U2AF1L4Q8WU68 220 aaKnown RBP24.04■■□□□ 1.44
CIRBP-239ENST00000592467 MKL1Q969V6 931 aa24.04■■□□□ 1.44
CIRBP-239ENST00000592467 MOV10L1Q9BXT6 1211 aaKnown RBP24.04■■□□□ 1.44
CIRBP-239ENST00000592467 FBXO28Q9NVF7 368 aa24.04■■□□□ 1.44
CIRBP-239ENST00000592467 ANAPC4Q9UJX5 808 aa24.04■■□□□ 1.44
CIRBP-239ENST00000592467 TRIM6-TRIM34B2RNG4 842 aa24.03■■□□□ 1.44
CIRBP-239ENST00000592467 FLOT1O75955 427 aa24.03■■□□□ 1.44
CIRBP-239ENST00000592467 SGPL1O95470 568 aa24.03■■□□□ 1.44
CIRBP-239ENST00000592467 PTPREP23469 700 aa24.03■■□□□ 1.44
CIRBP-239ENST00000592467 CEP95Q96GE4 821 aa24.03■■□□□ 1.44
CIRBP-239ENST00000592467 SPATC1LQ9H0A9 340 aa24.03■■□□□ 1.44
CIRBP-239ENST00000592467 ZNF287Q9HBT7 754 aa24.03■■□□□ 1.44
CIRBP-239ENST00000592467 INCENPQ9NQS7 918 aa24.03■■□□□ 1.44
CIRBP-239ENST00000592467 MTMR4Q9NYA4 1195 aa24.03■■□□□ 1.44
CIRBP-239ENST00000592467 SDSP20132 328 aa24.02■■□□□ 1.44
CIRBP-239ENST00000592467 CTDSPL2Q05D32 466 aa24.02■■□□□ 1.44
CIRBP-239ENST00000592467 MAP2K5Q13163 448 aa24.02■■□□□ 1.44
CIRBP-239ENST00000592467 GRB14Q14449 540 aa24.02■■□□□ 1.44
CIRBP-239ENST00000592467 CCL14Q16627 93 aa24.02■■□□□ 1.44
CIRBP-239ENST00000592467 PRPF38BQ5VTL8 546 aaKnown RBP24.02■■□□□ 1.44
CIRBP-239ENST00000592467 MB21D1Q8N884 522 aa24.02■■□□□ 1.44
CIRBP-239ENST00000592467 RILPL2Q969X0 211 aa24.02■■□□□ 1.44
CIRBP-239ENST00000592467 CRISPLD2Q9H0B8 497 aa24.02■■□□□ 1.44
CIRBP-239ENST00000592467 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.02■■□□□ 1.44
CIRBP-239ENST00000592467 GOPCQ9HD26 462 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms