RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 CYP2D6P10635 497 aa16.78■□□□□ 0.28
CLPTM1-208ENST00000588274 ATN1P54259 1190 aaPredicted RBP16.78■□□□□ 0.28
CLPTM1-208ENST00000588274 RTP1P59025 263 aa16.78■□□□□ 0.28
CLPTM1-208ENST00000588274 MAP3K12Q12852 859 aa16.78■□□□□ 0.28
CLPTM1-208ENST00000588274 WDR78Q5VTH9 848 aa16.78■□□□□ 0.28
CLPTM1-208ENST00000588274 AACSQ86V21 672 aa16.78■□□□□ 0.28
CLPTM1-208ENST00000588274 CLEC10AQ8IUN9 316 aa16.78■□□□□ 0.28
CLPTM1-208ENST00000588274 ITPRIPQ8IWB1 547 aa16.78■□□□□ 0.28
CLPTM1-208ENST00000588274 MUC3AQ02505 3323 aa16.78■□□□□ 0.28
CLPTM1-208ENST00000588274 MAGEB6P1A0A0J9YX57 407 aa16.77■□□□□ 0.28
CLPTM1-208ENST00000588274 ATP2B2Q01814 1243 aa16.77■□□□□ 0.28
CLPTM1-208ENST00000588274 LCORLQ8N3X6 602 aa16.77■□□□□ 0.28
CLPTM1-208ENST00000588274 SHCBP1Q8NEM2 672 aa16.77■□□□□ 0.28
CLPTM1-208ENST00000588274 SDR42E1Q8WUS8 393 aa16.77■□□□□ 0.28
CLPTM1-208ENST00000588274 SPATC1LQ9H0A9 340 aa16.77■□□□□ 0.28
CLPTM1-208ENST00000588274 DCP1AQ9NPI6 582 aaPredicted RBP16.77■□□□□ 0.28
CLPTM1-208ENST00000588274 IVNS1ABPQ9Y6Y0 642 aa16.77■□□□□ 0.28
CLPTM1-208ENST00000588274 ERCC3P19447 782 aa16.76■□□□□ 0.27
CLPTM1-208ENST00000588274 COG2Q14746 738 aa16.76■□□□□ 0.27
CLPTM1-208ENST00000588274 GJC2Q5T442 439 aaPredicted RBP16.76■□□□□ 0.27
CLPTM1-208ENST00000588274 COL25A1Q9BXS0 654 aaPredicted RBP16.76■□□□□ 0.27
CLPTM1-208ENST00000588274 IL1RAPL2Q9NP60 686 aa16.76■□□□□ 0.27
CLPTM1-208ENST00000588274 CABP5Q9NP86 173 aa16.76■□□□□ 0.27
CLPTM1-208ENST00000588274 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
CLPTM1-208ENST00000588274 ROBO3Q96MS0 1386 aa16.76■□□□□ 0.27
CLPTM1-208ENST00000588274 ZNF532Q9HCE3 1301 aa16.75■□□□□ 0.27
CLPTM1-208ENST00000588274 SEPT4O43236 478 aa16.75■□□□□ 0.27
CLPTM1-208ENST00000588274 CNGA1P29973 690 aa16.75■□□□□ 0.27
CLPTM1-208ENST00000588274 SLFNL1Q499Z3 407 aa16.75■□□□□ 0.27
CLPTM1-208ENST00000588274 C9orf50Q5SZB4 431 aa16.75■□□□□ 0.27
CLPTM1-208ENST00000588274 SLC9C2Q5TAH2 1124 aa16.75■□□□□ 0.27
CLPTM1-208ENST00000588274 FTSJ3Q8IY81 847 aaKnown RBP16.75■□□□□ 0.27
CLPTM1-208ENST00000588274 CWC22Q9HCG8 908 aaKnown RBP16.75■□□□□ 0.27
CLPTM1-208ENST00000588274 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
CLPTM1-208ENST00000588274 COL11A1P12107 1806 aaPredicted RBP16.75■□□□□ 0.27
CLPTM1-208ENST00000588274 STRNO43815 780 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 AKR1B1P15121 316 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 DSG3P32926 999 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 FAM47AQ5JRC9 791 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 C1orf53Q5VUE5 145 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 ANO1Q5XXA6 986 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 SLC39A5Q6ZMH5 540 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 TMEM179Q6ZVK1 233 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 ERC1Q8IUD2 1116 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 ABRAQ8N0Z2 381 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 RHPN1Q8TCX5 695 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 ATG4CQ96DT6 458 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 DYNLL2Q96FJ2 89 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 MAML3Q96JK9 1138 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 CRNKL1Q9BZJ0 848 aaKnown RBP16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 TANGO6Q9C0B7 1094 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 PDLIM7Q9NR12 457 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 MYH8P13535 1937 aa16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 BAZ2AQ9UIF9 1905 aaKnown RBP16.74■□□□□ 0.27
CLPTM1-208ENST00000588274 TRIM43BA6NCK2 446 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 CHGBP05060 677 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 POLR3DP05423 398 aaPredicted RBP16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 SHHQ15465 462 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 TRIM60Q495X7 471 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 PRAMEF19Q5SWL8 479 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 SH3RF1Q7Z6J0 888 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 SIRT2Q8IXJ6 389 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 TRIM43Q96BQ3 446 aaPredicted RBP16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 HOXC10Q9NYD6 342 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 ADAMTS5Q9UNA0 930 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 ATP11BQ9Y2G3 1177 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 TMX2Q9Y320 296 aa16.73■□□□□ 0.27
CLPTM1-208ENST00000588274 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 GOLIM4O00461 696 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 PRKAB2O43741 272 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 ITGB8P26012 769 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 TMEM132BQ14DG7 1078 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 LRRC41Q15345 812 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 TTF1Q15361 905 aaPredicted RBP16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 DPP9Q86TI2 863 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 SPICE1Q8N0Z3 855 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 PANK1Q8TE04 598 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 FAM161BQ96MY7 647 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 VCPKMTQ9H867 229 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 ARMT1Q9H993 441 aa16.72■□□□□ 0.27
CLPTM1-208ENST00000588274 MPHOSPH10O00566 681 aaKnown RBP16.71■□□□□ 0.27
CLPTM1-208ENST00000588274 REPS2Q8NFH8 660 aa16.71■□□□□ 0.27
CLPTM1-208ENST00000588274 LBHD1Q9BQE6 289 aaPredicted RBP16.71■□□□□ 0.27
CLPTM1-208ENST00000588274 TTYH1Q9H313 450 aaPredicted RBP16.71■□□□□ 0.27
CLPTM1-208ENST00000588274 MROH8Q9H579 483 aa16.71■□□□□ 0.27
CLPTM1-208ENST00000588274 SWAP70Q9UH65 585 aa16.71■□□□□ 0.27
CLPTM1-208ENST00000588274 PLXNA1Q9UIW2 1896 aa16.7■□□□□ 0.26
CLPTM1-208ENST00000588274 CYP2D7A0A087X1C5 515 aa16.7■□□□□ 0.26
CLPTM1-208ENST00000588274 KBTBD13C9JR72 458 aa16.7■□□□□ 0.26
CLPTM1-208ENST00000588274 ADD2P35612 726 aa16.7■□□□□ 0.26
CLPTM1-208ENST00000588274 ADCYAP1R1P41586 468 aa16.7■□□□□ 0.26
CLPTM1-208ENST00000588274 ICA1Q05084 483 aa16.7■□□□□ 0.26
CLPTM1-208ENST00000588274 ARRDC4Q8NCT1 418 aa16.7■□□□□ 0.26
CLPTM1-208ENST00000588274 BADQ92934 168 aa16.7■□□□□ 0.26
CLPTM1-208ENST00000588274 ZNF214Q9UL59 606 aaPredicted RBP16.7■□□□□ 0.26
CLPTM1-208ENST00000588274 PHF24Q9UPV7 400 aa16.7■□□□□ 0.26
CLPTM1-208ENST00000588274 WDR46O15213 610 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms