RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 AKR1B1P15121 316 aa18.36■□□□□ 0.53
PRKCSH-204ENST00000587290 TMED8Q6PL24 325 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-204ENST00000587290 DNAH12Q6ZR08 3092 aa18.36■□□□□ 0.53
PRKCSH-204ENST00000587290 ZNFX1Q9P2E3 1918 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-204ENST00000587290 ATP5JP18859 108 aa18.35■□□□□ 0.53
PRKCSH-204ENST00000587290 LHX8Q68G74 356 aa18.35■□□□□ 0.53
PRKCSH-204ENST00000587290 SAMD1Q6SPF0 538 aaPredicted RBP18.35■□□□□ 0.53
PRKCSH-204ENST00000587290 SPICE1Q8N0Z3 855 aa18.35■□□□□ 0.53
PRKCSH-204ENST00000587290 NPLOC4Q8TAT6 608 aa18.35■□□□□ 0.53
PRKCSH-204ENST00000587290 HAUS7Q99871 368 aa18.35■□□□□ 0.53
PRKCSH-204ENST00000587290 TANGO6Q9C0B7 1094 aa18.35■□□□□ 0.53
PRKCSH-204ENST00000587290 PTPREP23469 700 aa18.34■□□□□ 0.53
PRKCSH-204ENST00000587290 CCNA1P78396 465 aa18.34■□□□□ 0.53
PRKCSH-204ENST00000587290 TSHZ3Q63HK5 1081 aa18.34■□□□□ 0.53
PRKCSH-204ENST00000587290 LBX2Q6XYB7 198 aa18.34■□□□□ 0.53
PRKCSH-204ENST00000587290 SIAH1Q8IUQ4 282 aa18.34■□□□□ 0.53
PRKCSH-204ENST00000587290 LRCH3Q96II8 777 aa18.34■□□□□ 0.53
PRKCSH-204ENST00000587290 ZNF236Q9UL36 1845 aa18.34■□□□□ 0.53
PRKCSH-204ENST00000587290 CYP2C19P33261 490 aa18.33■□□□□ 0.52
PRKCSH-204ENST00000587290 GRB14Q14449 540 aa18.33■□□□□ 0.52
PRKCSH-204ENST00000587290 TMEM179Q6ZVK1 233 aa18.33■□□□□ 0.52
PRKCSH-204ENST00000587290 TRMT44Q8IYL2 757 aaKnown RBP18.33■□□□□ 0.52
PRKCSH-204ENST00000587290 MOV10L1Q9BXT6 1211 aaKnown RBP18.33■□□□□ 0.52
PRKCSH-204ENST00000587290 GREB1LQ9C091 1923 aaPredicted RBP18.32■□□□□ 0.52
PRKCSH-204ENST00000587290 SLC15A5A6NIM6 579 aa18.32■□□□□ 0.52
PRKCSH-204ENST00000587290 USP17L12C9JPN9 530 aa18.32■□□□□ 0.52
PRKCSH-204ENST00000587290 USP17L21D6R901 530 aa18.32■□□□□ 0.52
PRKCSH-204ENST00000587290 CAPN2P17655 700 aa18.32■□□□□ 0.52
PRKCSH-204ENST00000587290 ICA1Q05084 483 aa18.32■□□□□ 0.52
PRKCSH-204ENST00000587290 LRRCC1Q9C099 1032 aa18.32■□□□□ 0.52
PRKCSH-204ENST00000587290 PUS7LQ9H0K6 701 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-204ENST00000587290 IVNS1ABPQ9Y6Y0 642 aa18.32■□□□□ 0.52
PRKCSH-204ENST00000587290 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 CDK8P49336 464 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 ATP2B2Q01814 1243 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 COG2Q14746 738 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 LRRC26Q2I0M4 334 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 C12orf60Q5U649 245 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 STK11IPQ8N1F8 1099 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 TRPV1Q8NER1 839 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 ATG4CQ96DT6 458 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 GDF15Q99988 308 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.31■□□□□ 0.529e-7■□□□□ 9.1
PRKCSH-204ENST00000587290 SPATC1LQ9H0A9 340 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 SWAP70Q9UH65 585 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 SLC4A4Q9Y6R1 1079 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 PLXNA1Q9UIW2 1896 aa18.31■□□□□ 0.52
PRKCSH-204ENST00000587290 FLOT1O75955 427 aa18.3■□□□□ 0.52
PRKCSH-204ENST00000587290 COL6A1P12109 1028 aa18.3■□□□□ 0.52
PRKCSH-204ENST00000587290 ADORA2AP29274 412 aa18.3■□□□□ 0.52
PRKCSH-204ENST00000587290 CNGA1P29973 690 aa18.3■□□□□ 0.52
PRKCSH-204ENST00000587290 MAGEA10P43363 369 aaPredicted RBP18.3■□□□□ 0.52
PRKCSH-204ENST00000587290 PLS1Q14651 629 aa18.3■□□□□ 0.52
PRKCSH-204ENST00000587290 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
PRKCSH-204ENST00000587290 ANO1Q5XXA6 986 aa18.3■□□□□ 0.52
PRKCSH-204ENST00000587290 ATP8A2Q9NTI2 1148 aa18.3■□□□□ 0.52
PRKCSH-204ENST00000587290 COL6A3P12111 3177 aa18.3■□□□□ 0.52
PRKCSH-204ENST00000587290 MYH4Q9Y623 1939 aa18.29■□□□□ 0.52
PRKCSH-204ENST00000587290 SMCHD1A6NHR9 2005 aa18.29■□□□□ 0.52
PRKCSH-204ENST00000587290 ERCC3P19447 782 aa18.29■□□□□ 0.52
PRKCSH-204ENST00000587290 UBE3CQ15386 1083 aa18.29■□□□□ 0.52
PRKCSH-204ENST00000587290 C16orf86Q6ZW13 317 aa18.29■□□□□ 0.52
PRKCSH-204ENST00000587290 VCPKMTQ9H867 229 aa18.29■□□□□ 0.52
PRKCSH-204ENST00000587290 ARHGEF10LQ9HCE6 1279 aa18.29■□□□□ 0.52
PRKCSH-204ENST00000587290 FBXO28Q9NVF7 368 aa18.29■□□□□ 0.52
PRKCSH-204ENST00000587290 TMX2Q9Y320 296 aa18.29■□□□□ 0.52
PRKCSH-204ENST00000587290 COBLO75128 1261 aa18.28■□□□□ 0.52
PRKCSH-204ENST00000587290 HOXC6P09630 235 aa18.28■□□□□ 0.52
PRKCSH-204ENST00000587290 DSG3P32926 999 aa18.28■□□□□ 0.52
PRKCSH-204ENST00000587290 CTR9Q6PD62 1173 aa18.28■□□□□ 0.52
PRKCSH-204ENST00000587290 HOXC10Q9NYD6 342 aa18.28■□□□□ 0.52
PRKCSH-204ENST00000587290 DDX20Q9UHI6 824 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-204ENST00000587290 RAD21O60216 631 aa18.27■□□□□ 0.52
PRKCSH-204ENST00000587290 EEF2P13639 858 aaKnown RBP18.27■□□□□ 0.52
PRKCSH-204ENST00000587290 DPP9Q86TI2 863 aa18.27■□□□□ 0.52
PRKCSH-204ENST00000587290 NCAPG2Q86XI2 1143 aa18.27■□□□□ 0.52
PRKCSH-204ENST00000587290 CHMP4BQ9H444 224 aaKnown RBP18.27■□□□□ 0.52
PRKCSH-204ENST00000587290 A0A1W2PPC1 479 aa18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 IGHA2P01877 340 aa18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 CYBAP13498 195 aa18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 ATN1P54259 1190 aaPredicted RBP18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 PRAMEF19Q5SWL8 479 aa18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 AMOTL1Q8IY63 956 aa18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 LPAR1Q92633 364 aa18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 SENP6Q9GZR1 1112 aaPredicted RBP18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 ECHDC1Q9NTX5 307 aa18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 LTBP2Q14767 1821 aa18.26■□□□□ 0.51
PRKCSH-204ENST00000587290 MDM2Q00987 491 aaPredicted RBP18.25■□□□□ 0.51
PRKCSH-204ENST00000587290 TMEM132BQ14DG7 1078 aa18.25■□□□□ 0.51
PRKCSH-204ENST00000587290 OSBP2Q969R2 916 aa18.25■□□□□ 0.51
PRKCSH-204ENST00000587290 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
PRKCSH-204ENST00000587290 CCDC17Q96LX7 622 aa18.25■□□□□ 0.51
PRKCSH-204ENST00000587290 STRBPQ96SI9 672 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-204ENST00000587290 NUP88Q99567 741 aaPredicted RBP18.25■□□□□ 0.51
PRKCSH-204ENST00000587290 WDR46O15213 610 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-204ENST00000587290 MYCNP04198 464 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-204ENST00000587290 BMP8BP34820 402 aa18.24■□□□□ 0.51
PRKCSH-204ENST00000587290 FAM83BQ5T0W9 1011 aa18.24■□□□□ 0.51
PRKCSH-204ENST00000587290 GJC2Q5T442 439 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms