RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 MFSD6Q6ZSS7 791 aa16.35■□□□□ 0.21
PRKCSH-202ENST00000585540 MB21D1Q8N884 522 aa16.35■□□□□ 0.21
PRKCSH-202ENST00000585540 ACER1Q8TDN7 264 aa16.35■□□□□ 0.21
PRKCSH-202ENST00000585540 CNNM2Q9H8M5 875 aa16.35■□□□□ 0.21
PRKCSH-202ENST00000585540 TCP11L1Q9NUJ3 509 aa16.35■□□□□ 0.21
PRKCSH-202ENST00000585540 MTMR4Q9NYA4 1195 aa16.35■□□□□ 0.21
PRKCSH-202ENST00000585540 HOXC10Q9NYD6 342 aa16.35■□□□□ 0.21
PRKCSH-202ENST00000585540 A0A1W2PRG0 241 aa16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 HERVK_113P62684 666 aa16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 TFAP4Q01664 338 aa16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 OTOP1Q7RTM1 612 aa16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 CD99L2Q8TCZ2 262 aa16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 MCOLN1Q9GZU1 580 aa16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 CPA4Q9UI42 421 aa16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 RABGAP1Q9Y3P9 1069 aa16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 TRIM17Q9Y577 477 aa16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
PRKCSH-202ENST00000585540 MYH4Q9Y623 1939 aa16.33■□□□□ 0.21
PRKCSH-202ENST00000585540 SMIM22K7EJ46 135 aa16.33■□□□□ 0.2
PRKCSH-202ENST00000585540 NOVP48745 357 aa16.33■□□□□ 0.2
PRKCSH-202ENST00000585540 CCNA1P78396 465 aa16.33■□□□□ 0.2
PRKCSH-202ENST00000585540 ZYXQ15942 572 aaKnown RBP16.33■□□□□ 0.2
PRKCSH-202ENST00000585540 KIAA1211Q6ZU35 1233 aa16.33■□□□□ 0.2
PRKCSH-202ENST00000585540 GMCL1P1Q8NEA9 526 aa16.33■□□□□ 0.2
PRKCSH-202ENST00000585540 ESR2Q92731 530 aa16.33■□□□□ 0.2
PRKCSH-202ENST00000585540 TTC14Q96N46 770 aa16.33■□□□□ 0.2
PRKCSH-202ENST00000585540 KRT23Q9C075 422 aa16.33■□□□□ 0.2
PRKCSH-202ENST00000585540 RPAP3Q9H6T3 665 aaPredicted RBP16.33■□□□□ 0.2
PRKCSH-202ENST00000585540 MGAMO43451 1857 aa16.32■□□□□ 0.2
PRKCSH-202ENST00000585540 RANBP6O60518 1105 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-202ENST00000585540 PRDM1O75626 825 aa16.32■□□□□ 0.2
PRKCSH-202ENST00000585540 FDX1P10109 184 aa16.32■□□□□ 0.2
PRKCSH-202ENST00000585540 CTDSPL2Q05D32 466 aa16.32■□□□□ 0.2
PRKCSH-202ENST00000585540 COG2Q14746 738 aa16.32■□□□□ 0.2
PRKCSH-202ENST00000585540 SIAH1Q8IUQ4 282 aa16.32■□□□□ 0.2
PRKCSH-202ENST00000585540 CEP95Q96GE4 821 aa16.32■□□□□ 0.2
PRKCSH-202ENST00000585540 IL25Q9H293 177 aa16.32■□□□□ 0.2
PRKCSH-202ENST00000585540 TOMM22Q9NS69 142 aa16.32■□□□□ 0.2
PRKCSH-202ENST00000585540 A0A0G2JMZ2 1700 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 CDC45O75419 566 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 CAPN15O75808 1086 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 COPB2P35606 906 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 PSMC4P43686 418 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 ATP2B2Q01814 1243 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 IQCA1Q86XH1 822 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 ANKRD13CQ8N6S4 541 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 GPRC5AQ8NFJ5 357 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 COA7Q96BR5 231 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 P2RX7Q99572 595 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 PTPN22Q9Y2R2 807 aa16.31■□□□□ 0.2
PRKCSH-202ENST00000585540 MAPK4P31152 587 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 ERVK-9P63128 1117 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 ERVK-24P63145 666 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 TRDNQ13061 729 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 RCSD1Q6JBY9 416 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 STK11IPQ8N1F8 1099 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 ESYT1Q9BSJ8 1104 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 TANGO6Q9C0B7 1094 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 CLIP2Q9UDT6 1046 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 SRRDQ9UH36 339 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
PRKCSH-202ENST00000585540 SPDYE16A6NNV3 312 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 F5H6K3 240 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 TNPO2O14787 897 aaKnown RBP16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 EPB41L2O43491 1005 aaKnown RBP16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 PLA2G6O60733 806 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 EIF5BO60841 1220 aaKnown RBP16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 DSG3P32926 999 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 HAND2P61296 217 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 KLRC3Q07444 240 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 TBC1D10CQ8IV04 446 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 SOCS4Q8WXH5 440 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 MAP4K1Q92918 833 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 ABHD8Q96I13 439 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 GMCL1Q96IK5 515 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 PARP14Q460N5 1801 aa16.29■□□□□ 0.2
PRKCSH-202ENST00000585540 FLOT1O75955 427 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 NDUFB10O96000 172 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 IRF5Q13568 498 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 FAM47AQ5JRC9 791 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 RRP12Q5JTH9 1297 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 FAM160B2Q86V87 743 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 DGKHQ86XP1 1220 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 CLEC10AQ8IUN9 316 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 CCAR1Q8IX12 1150 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 SHCBP1Q8NEM2 672 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 MTA3Q9BTC8 594 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 FEM1BQ9UK73 627 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 PPP1R9AQ9ULJ8 1098 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 STX8Q9UNK0 236 aa16.28■□□□□ 0.2
PRKCSH-202ENST00000585540 CAPN2P17655 700 aa16.27■□□□□ 0.2
PRKCSH-202ENST00000585540 RNF20Q5VTR2 975 aa16.27■□□□□ 0.2
PRKCSH-202ENST00000585540 TRIM47Q96LD4 638 aa16.27■□□□□ 0.2
PRKCSH-202ENST00000585540 RBPJLQ9UBG7 517 aa16.27■□□□□ 0.2
PRKCSH-202ENST00000585540 ADAMTS5Q9UNA0 930 aa16.27■□□□□ 0.2
PRKCSH-202ENST00000585540 RLFQ13129 1914 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms