RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 PUM3Q15397 648 aaKnown RBP7.51□□□□□ -1.21
PTPRM-213ENST00000580949 CCDC158Q5M9N0 1113 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 TTC39AQ5SRH9 613 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 GORABQ5T7V8 394 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 FIGNL1Q6PIW4 674 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 ANKRD18AQ8IVF6 992 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 ALDH16A1Q8IZ83 802 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 CNBD1Q8NA66 436 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 KBTBD3Q8NAB2 608 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 LPIN2Q92539 896 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 SNX21Q969T3 373 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 GTPBP3Q969Y2 492 aaKnown RBP7.51□□□□□ -1.21
PTPRM-213ENST00000580949 IL17RAQ96F46 866 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 ZNF512BQ96KM6 892 aaPredicted RBP7.51□□□□□ -1.21
PTPRM-213ENST00000580949 CDC5LQ99459 802 aaKnown RBP7.51□□□□□ -1.21
PTPRM-213ENST00000580949 BSDC1Q9NW68 430 aaPredicted RBP7.51□□□□□ -1.21
PTPRM-213ENST00000580949 MINPP1Q9UNW1 487 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 DDX60Q8IY21 1712 aaKnown RBP7.51□□□□□ -1.21
PTPRM-213ENST00000580949 LRP5O75197 1615 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 HIP1O00291 1037 aa7.5□□□□□ -1.21
PTPRM-213ENST00000580949 HSPA4P34932 840 aa7.5□□□□□ -1.21
PTPRM-213ENST00000580949 GMPRP36959 345 aa7.5□□□□□ -1.21
PTPRM-213ENST00000580949 MCAMP43121 646 aa7.5□□□□□ -1.21
PTPRM-213ENST00000580949 ZAP70P43403 619 aa7.5□□□□□ -1.21
PTPRM-213ENST00000580949 FKBP4Q02790 459 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTPRM-213ENST00000580949 EZH2Q15910 746 aaKnown RBP7.5□□□□□ -1.21
PTPRM-213ENST00000580949 ZNF589Q86UQ0 364 aaPredicted RBP7.5□□□□□ -1.21
PTPRM-213ENST00000580949 RUFY2Q8WXA3 655 aa7.5□□□□□ -1.21
PTPRM-213ENST00000580949 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
PTPRM-213ENST00000580949 TRERF1Q96PN7 1200 aa7.5□□□□□ -1.21
PTPRM-213ENST00000580949 SEC62Q99442 399 aaKnown RBP7.5□□□□□ -1.21
PTPRM-213ENST00000580949 PIH1D3Q9NQM4 214 aaKnown RBP7.5□□□□□ -1.21
PTPRM-213ENST00000580949 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTPRM-213ENST00000580949 PNPLA7Q6ZV29 1317 aa7.5□□□□□ -1.21
PTPRM-213ENST00000580949 RAD50Q92878 1312 aa7.5□□□□□ -1.21
PTPRM-213ENST00000580949 UBR3Q6ZT12 1888 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 MED23Q9ULK4 1368 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 KLRG2A4D1S0 409 aaPredicted RBP7.49□□□□□ -1.21
PTPRM-213ENST00000580949 RNF113AO15541 343 aaKnown RBP7.49□□□□□ -1.21
PTPRM-213ENST00000580949 EPB41L2O43491 1005 aaKnown RBP7.49□□□□□ -1.21
PTPRM-213ENST00000580949 WIPF1O43516 503 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 CYP2E1P05181 493 aaPredicted RBP7.49□□□□□ -1.21
PTPRM-213ENST00000580949 SLC5A1P13866 664 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 ATP2B4P23634 1241 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 HMGB2P26583 209 aaKnown RBP7.49□□□□□ -1.21
PTPRM-213ENST00000580949 ARID4AP29374 1257 aaPredicted RBP7.49□□□□□ -1.21
PTPRM-213ENST00000580949 BECN1Q14457 450 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 RABEP1Q15276 862 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 RTN1Q16799 776 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 CRY2Q49AN0 593 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 ZMYM1Q5SVZ6 1142 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 CCDC129Q6ZRS4 1044 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 MAP4K1Q92918 833 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 KCNB2Q92953 911 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 COL26A1Q96A83 441 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 CFHR5Q9BXR6 569 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 ZCCHC2Q9C0B9 1178 aaKnown RBP7.49□□□□□ -1.21
PTPRM-213ENST00000580949 HMG20BQ9P0W2 317 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 SNX14Q9Y5W7 946 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 GJA3Q9Y6H8 435 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 C4AP0C0L4 1744 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 COL24A1Q17RW2 1714 aa7.49□□□□□ -1.21
PTPRM-213ENST00000580949 UQCRFS1P1P0C7P4 283 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 KLRK1P26718 216 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 GYG1P46976 350 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 ANAPC15P60006 121 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 PDE4CQ08493 712 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 GRAPQ13588 217 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 RASGRF1Q13972 1273 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 UBE4AQ14139 1066 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 NECTIN1Q15223 517 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 HIF1AQ16665 826 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 SAMD5Q5TGI4 173 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 MSL1Q68DK7 614 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 KIAA1211Q6ZU35 1233 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 DEFB132Q7Z7B7 95 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 TICAM2Q86XR7 235 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 NLGN1Q8N2Q7 840 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 FLAD1Q8NFF5 587 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 GRAPLQ8TC17 118 aaPredicted RBP7.48□□□□□ -1.21
PTPRM-213ENST00000580949 MYO19Q96H55 970 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 FAM84BQ96KN1 310 aaPredicted RBP7.48□□□□□ -1.21
PTPRM-213ENST00000580949 COL25A1Q9BXS0 654 aaPredicted RBP7.48□□□□□ -1.21
PTPRM-213ENST00000580949 NDFIP2Q9NV92 336 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 ANKIB1Q9P2G1 1089 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 PHF24Q9UPV7 400 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 PCDHGC4Q9Y5F7 938 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 TAF6LQ9Y6J9 622 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 CCDC171Q6TFL3 1326 aa7.48□□□□□ -1.21
PTPRM-213ENST00000580949 RFX7Q2KHR2 1363 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 M0R2C6 588 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 GPR25O00155 361 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 NPHP1O15259 732 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 FOXP2O15409 715 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 MMP10P09238 476 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 HOXA10P31260 410 aaPredicted RBP7.47□□□□□ -1.21
PTPRM-213ENST00000580949 ST5P78524 1137 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 COL9A3Q14050 684 aaPredicted RBP7.47□□□□□ -1.21
PTPRM-213ENST00000580949 GAS6Q14393 721 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 SLC15A2Q16348 729 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms