RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 HOXC10Q9NYD6 342 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 PCDHB15Q9Y5E8 787 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 STRNO43815 780 aa16.13■□□□□ 0.17
TRAF4-214ENST00000580073 SYN1P17600 705 aa16.13■□□□□ 0.17
TRAF4-214ENST00000580073 CCND3P30281 292 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-214ENST00000580073 CCL14Q16627 93 aa16.13■□□□□ 0.17
TRAF4-214ENST00000580073 SHCBP1Q8NEM2 672 aa16.13■□□□□ 0.17
TRAF4-214ENST00000580073 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
TRAF4-214ENST00000580073 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
TRAF4-214ENST00000580073 IL1RAPL2Q9NP60 686 aa16.13■□□□□ 0.17
TRAF4-214ENST00000580073 PRKAG2Q9UGJ0 569 aa16.13■□□□□ 0.17
TRAF4-214ENST00000580073 DDX20Q9UHI6 824 aaKnown RBP16.13■□□□□ 0.17
TRAF4-214ENST00000580073 NDUFB9Q9Y6M9 179 aa16.13■□□□□ 0.17
TRAF4-214ENST00000580073 DNM1LO00429 736 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 PEX10O60683 326 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 RAB11FIP3O75154 756 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 CNMDO75829 334 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 CNGA1P29973 690 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 PLCD1P51178 756 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 GABPAQ06546 454 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 COG2Q14746 738 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 LHX8Q68G74 356 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 DPP9Q86TI2 863 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 LRCH3Q96II8 777 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 LBHD1Q9BQE6 289 aaPredicted RBP16.12■□□□□ 0.17
TRAF4-214ENST00000580073 ATP8A2Q9NTI2 1148 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 ZNF532Q9HCE3 1301 aa16.12■□□□□ 0.17
TRAF4-214ENST00000580073 GREB1LQ9C091 1923 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-214ENST00000580073 GOLIM4O00461 696 aa16.11■□□□□ 0.17
TRAF4-214ENST00000580073 SOX1O00570 391 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-214ENST00000580073 SEPT2Q15019 361 aa16.11■□□□□ 0.17
TRAF4-214ENST00000580073 OLFML2BQ68BL8 750 aa16.11■□□□□ 0.17
TRAF4-214ENST00000580073 ACER1Q8TDN7 264 aa16.11■□□□□ 0.17
TRAF4-214ENST00000580073 KBTBD13C9JR72 458 aa16.1■□□□□ 0.17
TRAF4-214ENST00000580073 ICA1Q05084 483 aa16.1■□□□□ 0.17
TRAF4-214ENST00000580073 ARRDC4Q8NCT1 418 aa16.1■□□□□ 0.17
TRAF4-214ENST00000580073 SLC17A8Q8NDX2 589 aa16.1■□□□□ 0.17
TRAF4-214ENST00000580073 CCDC17Q96LX7 622 aa16.1■□□□□ 0.17
TRAF4-214ENST00000580073 SPATC1LQ9H0A9 340 aa16.1■□□□□ 0.17
TRAF4-214ENST00000580073 MROH8Q9H579 483 aa16.1■□□□□ 0.17
TRAF4-214ENST00000580073 DCP1AQ9NPI6 582 aaPredicted RBP16.1■□□□□ 0.17
TRAF4-214ENST00000580073 PAG1Q9NWQ8 432 aa16.1■□□□□ 0.17
TRAF4-214ENST00000580073 BTBD7Q9P203 1132 aa16.1■□□□□ 0.17
TRAF4-214ENST00000580073 LAMA3Q16787 3333 aa16.09■□□□□ 0.17
TRAF4-214ENST00000580073 WDR46O15213 610 aaKnown RBP16.09■□□□□ 0.17
TRAF4-214ENST00000580073 COPB2P35606 906 aa16.09■□□□□ 0.17
TRAF4-214ENST00000580073 LRRC26Q2I0M4 334 aa16.09■□□□□ 0.17
TRAF4-214ENST00000580073 ZSCAN25Q6NSZ9 544 aa16.09■□□□□ 0.17
TRAF4-214ENST00000580073 ABRAQ8N0Z2 381 aa16.09■□□□□ 0.17
TRAF4-214ENST00000580073 SDR42E1Q8WUS8 393 aa16.09■□□□□ 0.17
TRAF4-214ENST00000580073 FLOT1O75955 427 aa16.08■□□□□ 0.16
TRAF4-214ENST00000580073 SLC25A27O95847 323 aa16.08■□□□□ 0.16
TRAF4-214ENST00000580073 CYBAP13498 195 aa16.08■□□□□ 0.16
TRAF4-214ENST00000580073 ADORA2AP29274 412 aa16.08■□□□□ 0.16
TRAF4-214ENST00000580073 GUCY1A2P33402 732 aa16.08■□□□□ 0.16
TRAF4-214ENST00000580073 POTEEQ6S8J3 1075 aa16.08■□□□□ 0.16
TRAF4-214ENST00000580073 LCORLQ8N3X6 602 aa16.08■□□□□ 0.16
TRAF4-214ENST00000580073 DEFB123Q8N688 67 aa16.08■□□□□ 0.16
TRAF4-214ENST00000580073 SENP6Q9GZR1 1112 aaPredicted RBP16.08■□□□□ 0.16
TRAF4-214ENST00000580073 TCRBV5S4A2TA0A5A2 114 aa16.07■□□□□ 0.16
TRAF4-214ENST00000580073 APBB1O00213 710 aa16.07■□□□□ 0.16
TRAF4-214ENST00000580073 PLS1Q14651 629 aa16.07■□□□□ 0.16
TRAF4-214ENST00000580073 MOV10L1Q9BXT6 1211 aaKnown RBP16.07■□□□□ 0.16
TRAF4-214ENST00000580073 VCPKMTQ9H867 229 aa16.07■□□□□ 0.16
TRAF4-214ENST00000580073 GOPCQ9HD26 462 aa16.07■□□□□ 0.16
TRAF4-214ENST00000580073 FLRT1Q9NZU1 646 aa16.07■□□□□ 0.16
TRAF4-214ENST00000580073 NRBP1Q9UHY1 535 aa16.07■□□□□ 0.16
TRAF4-214ENST00000580073 ROBO3Q96MS0 1386 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 SEPT4O43236 478 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 MBD4O95243 580 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 ATP5JP18859 108 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 ERCC3P19447 782 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 DSG3P32926 999 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 CYP2C19P33261 490 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 ADD2P35612 726 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 NCAPG2Q86XI2 1143 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 NPLOC4Q8TAT6 608 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 ARPP21Q9UBL0 812 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-214ENST00000580073 STXBP5LQ9Y2K9 1186 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 TMX2Q9Y320 296 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 SMCHD1A6NHR9 2005 aa16.06■□□□□ 0.16
TRAF4-214ENST00000580073 A0A1W2PRG0 241 aa16.05■□□□□ 0.16
TRAF4-214ENST00000580073 FCER1AP12319 257 aa16.05■□□□□ 0.16
TRAF4-214ENST00000580073 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-214ENST00000580073 UBE3CQ15386 1083 aa16.05■□□□□ 0.16
TRAF4-214ENST00000580073 HAUS7Q99871 368 aa16.05■□□□□ 0.16
TRAF4-214ENST00000580073 ARMT1Q9H993 441 aa16.05■□□□□ 0.16
TRAF4-214ENST00000580073 RTP1P59025 263 aa16.04■□□□□ 0.16
TRAF4-214ENST00000580073 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
TRAF4-214ENST00000580073 KANSL2Q9H9L4 492 aa16.04■□□□□ 0.16
TRAF4-214ENST00000580073 AKR1B1P15121 316 aa16.03■□□□□ 0.16
TRAF4-214ENST00000580073 C12orf60Q5U649 245 aa16.03■□□□□ 0.16
TRAF4-214ENST00000580073 SLC44A5Q8NCS7 719 aa16.03■□□□□ 0.16
TRAF4-214ENST00000580073 ATG4CQ96DT6 458 aa16.03■□□□□ 0.16
TRAF4-214ENST00000580073 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
TRAF4-214ENST00000580073 MMP19Q99542 508 aa16.03■□□□□ 0.16
TRAF4-214ENST00000580073 LRRCC1Q9C099 1032 aa16.03■□□□□ 0.16
TRAF4-214ENST00000580073 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
TRAF4-214ENST00000580073 BOLA2Q9H3K6 86 aa16.03■□□□□ 0.16
TRAF4-214ENST00000580073 DLL1O00548 723 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms