RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 ATP2B2Q01814 1243 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 NUCB1Q02818 461 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 LRRFIP1Q32MZ4 808 aaKnown RBP6.47□□□□□ -1.37
CHD3-212ENST00000570758 VPS53Q5VIR6 699 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 LBX2Q6XYB7 198 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 CHD1LQ86WJ1 897 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 PLEKHM2Q8IWE5 1019 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 SPICE1Q8N0Z3 855 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 PXYLP1Q8TE99 480 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 USP6NLQ92738 828 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 EVI5LQ96CN4 794 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 FAM227BQ96M60 508 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 RNF208Q9H0X6 261 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 VCPKMTQ9H867 229 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 MKNK2Q9HBH9 465 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 ARHGEF10LQ9HCE6 1279 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 RABGAP1Q9Y3P9 1069 aa6.47□□□□□ -1.37
CHD3-212ENST00000570758 KIAA0100Q14667 2235 aaKnown RBP6.47□□□□□ -1.37
CHD3-212ENST00000570758 GREB1LQ9C091 1923 aaPredicted RBP6.46□□□□□ -1.37
CHD3-212ENST00000570758 IGKV6D-41A0A0C4DH26 115 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 A0A0D9SFI3 127 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 CYP2B6P20813 491 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 DSG3P32926 999 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 GJA8P48165 433 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 COG2Q14746 738 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 CCL14Q16627 93 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 MORN1Q5T089 497 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 GPR142Q7Z601 462 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 PLEKHH3Q7Z736 793 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 TRIB2Q92519 343 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 LPAR1Q92633 364 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 ATG4CQ96DT6 458 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 NUDT12Q9BQG2 462 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 TANGO6Q9C0B7 1094 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 NAPBQ9H115 298 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 KANSL2Q9H9L4 492 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 INCENPQ9NQS7 918 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 FBXO28Q9NVF7 368 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 TACC3Q9Y6A5 838 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 MYH8P13535 1937 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 RLFQ13129 1914 aa6.46□□□□□ -1.38
CHD3-212ENST00000570758 TRIM6-TRIM34B2RNG4 842 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 WDR46O15213 610 aaKnown RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 FLOT1O75955 427 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 SGPL1O95470 568 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 NDUFB10O96000 172 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 HMGCRP04035 888 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 XRCC5P13010 732 aaKnown RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 PTPREP23469 700 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 PDE4AP27815 886 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 CTDSPL2Q05D32 466 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 PPARAQ07869 468 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 MAP2K5Q13163 448 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 NMIQ13287 307 aaPredicted RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 FAM47AQ5JRC9 791 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 FAM83BQ5T0W9 1011 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 WDR78Q5VTH9 848 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 PRPF38BQ5VTL8 546 aaKnown RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 SAMD1Q6SPF0 538 aaPredicted RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 UBE2Q1Q7Z7E8 422 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 ZNF589Q86UQ0 364 aaPredicted RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 ZNF444Q8N0Y2 327 aaPredicted RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 U2AF1L4Q8WU68 220 aaKnown RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 SOCS4Q8WXH5 440 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 RILPL2Q969X0 211 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 CEP95Q96GE4 821 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 NUP88Q99567 741 aaPredicted RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 MOV10L1Q9BXT6 1211 aaKnown RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 NACAP1Q9BZK3 213 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.45□□□□□ -1.38
CHD3-212ENST00000570758 OSBPL3Q9H4L5 887 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 SH2D4AQ9H788 454 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 PAK6Q9NQU5 681 aaPredicted RBP6.45□□□□□ -1.38
CHD3-212ENST00000570758 HELLSQ9NRZ9 838 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 HOXC10Q9NYD6 342 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 FLRT1Q9NZU1 646 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 NYAP2Q9P242 653 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 CLIP2Q9UDT6 1046 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.45□□□□□ -1.38
CHD3-212ENST00000570758 A0A0G2JMZ2 1700 aa6.45□□□□□ -1.38
CHD3-212ENST00000570758 SLC15A5A6NIM6 579 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 F5H6K3 240 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 RAD21O60216 631 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 ZKSCAN1P17029 563 aaPredicted RBP6.44□□□□□ -1.38
CHD3-212ENST00000570758 SDSP20132 328 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 RGS2P41220 211 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 CCNA1P78396 465 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 TFAP4Q01664 338 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 KLRC3Q07444 240 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 GRB14Q14449 540 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 TMEM132BQ14DG7 1078 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 ALX1Q15699 326 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 MCMDC2Q4G0Z9 681 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 MAP3K21Q5TCX8 1036 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 CCAR1Q8IX12 1150 aaKnown RBP6.44□□□□□ -1.38
CHD3-212ENST00000570758 LRRC47Q8N1G4 583 aaKnown RBP6.44□□□□□ -1.38
CHD3-212ENST00000570758 REPS2Q8NFH8 660 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 NEDD1Q8NHV4 660 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 NPLOC4Q8TAT6 608 aa6.44□□□□□ -1.38
CHD3-212ENST00000570758 NKX2-3Q8TAU0 364 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms