RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 WDHD1O75717 1129 aaPredicted RBP11.8□□□□□ -0.52
GDE1-205ENST00000569899 HMGB1P09429 215 aaKnown RBP11.8□□□□□ -0.52
GDE1-205ENST00000569899 MCM2P49736 904 aa11.8□□□□□ -0.52
GDE1-205ENST00000569899 ANTXR2P58335 489 aa11.8□□□□□ -0.52
GDE1-205ENST00000569899 PICALMQ13492 652 aa11.8□□□□□ -0.52
GDE1-205ENST00000569899 CFAP100Q494V2 611 aa11.8□□□□□ -0.52
GDE1-205ENST00000569899 SBK1Q52WX2 424 aa11.8□□□□□ -0.52
GDE1-205ENST00000569899 Q6ZUG5 572 aa11.8□□□□□ -0.52
GDE1-205ENST00000569899 DHX32Q7L7V1 743 aaKnown RBP11.8□□□□□ -0.52
GDE1-205ENST00000569899 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
GDE1-205ENST00000569899 USP40Q9NVE5 1235 aa11.8□□□□□ -0.52
GDE1-205ENST00000569899 SHTN1A0MZ66 631 aa11.79□□□□□ -0.52
GDE1-205ENST00000569899 FZD9O00144 591 aa11.79□□□□□ -0.52
GDE1-205ENST00000569899 PRC1O43663 620 aa11.79□□□□□ -0.52
GDE1-205ENST00000569899 EXOSC10Q01780 885 aaKnown RBP11.79□□□□□ -0.52
GDE1-205ENST00000569899 TRDNQ13061 729 aa11.79□□□□□ -0.52
GDE1-205ENST00000569899 RRP12Q5JTH9 1297 aaKnown RBP11.79□□□□□ -0.52
GDE1-205ENST00000569899 MFSD6Q6ZSS7 791 aa11.79□□□□□ -0.52
GDE1-205ENST00000569899 CYB5R4Q7L1T6 521 aa11.79□□□□□ -0.52
GDE1-205ENST00000569899 AGBL3Q8NEM8 1001 aa11.79□□□□□ -0.52
GDE1-205ENST00000569899 MRIQ9BWK5 157 aa11.79□□□□□ -0.52
GDE1-205ENST00000569899 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
GDE1-205ENST00000569899 TOMM22Q9NS69 142 aa11.79□□□□□ -0.52
GDE1-205ENST00000569899 LMNB1P20700 586 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 MCM5P33992 734 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 CACNB3P54284 484 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 NFIAQ12857 509 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 C12orf60Q5U649 245 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 DESI1Q6ICB0 168 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 ALDH8A1Q9H2A2 487 aaPredicted RBP11.78□□□□□ -0.52
GDE1-205ENST00000569899 RNF41Q9H4P4 317 aaPredicted RBP11.78□□□□□ -0.52
GDE1-205ENST00000569899 HDAC9Q9UKV0 1011 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 TPCN1Q9ULQ1 816 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 LIMCH1Q9UPQ0 1083 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 UTRNP46939 3433 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 PRDM1O75626 825 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 POLR3DP05423 398 aaPredicted RBP11.78□□□□□ -0.52
GDE1-205ENST00000569899 HSP90AA1P07900 732 aaKnown RBP11.78□□□□□ -0.52
GDE1-205ENST00000569899 JUNDP17535 347 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 EIF6P56537 245 aaKnown RBP11.78□□□□□ -0.52
GDE1-205ENST00000569899 TNIP1Q15025 636 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 BRF1Q92994 677 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 AGXT2Q9BYV1 514 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 TDRD3Q9H7E2 651 aaKnown RBP11.78□□□□□ -0.52
GDE1-205ENST00000569899 CNNM2Q9H8M5 875 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.78□□□□□ -0.52
GDE1-205ENST00000569899 SRCAPQ6ZRS2 3230 aa11.78□□□□□ -0.52
GDE1-205ENST00000569899 GREB1LQ9C091 1923 aaPredicted RBP11.77□□□□□ -0.53
GDE1-205ENST00000569899 WDR19Q8NEZ3 1342 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 SOCS7O14512 581 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 GMPSP49915 693 aaPredicted RBP11.77□□□□□ -0.53
GDE1-205ENST00000569899 PLCD1P51178 756 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 FGD1P98174 961 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 APOBRQ0VD83 1088 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 ST3GAL1Q11201 340 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 ANKRD1Q15327 319 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 ME3Q16798 604 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 AMOTL1Q8IY63 956 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 SLC44A5Q8NCS7 719 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 DYNLL2Q96FJ2 89 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 PRMT6Q96LA8 375 aaPredicted RBP11.77□□□□□ -0.53
GDE1-205ENST00000569899 KRT23Q9C075 422 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 SLC6A16Q9GZN6 736 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 OSBPL5Q9H0X9 879 aaPredicted RBP11.77□□□□□ -0.53
GDE1-205ENST00000569899 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.53
GDE1-205ENST00000569899 DXOO77932 396 aaKnown RBP11.76□□□□□ -0.53
GDE1-205ENST00000569899 FGRP09769 529 aa11.76□□□□□ -0.53
GDE1-205ENST00000569899 CUL4AQ13619 759 aa11.76□□□□□ -0.53
GDE1-205ENST00000569899 DLGAP5Q15398 846 aa11.76□□□□□ -0.53
GDE1-205ENST00000569899 OGFOD1Q8N543 542 aa11.76□□□□□ -0.53
GDE1-205ENST00000569899 ZSWIM5Q9P217 1185 aa11.76□□□□□ -0.53
GDE1-205ENST00000569899 CLRN2A0PK11 232 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 SH2B2O14492 632 aaPredicted RBP11.75□□□□□ -0.53
GDE1-205ENST00000569899 ORC4O43929 436 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 S1PR4O95977 384 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 SLC3A2P08195 630 aaKnown RBP11.75□□□□□ -0.53
GDE1-205ENST00000569899 PCP11498 1178 aaKnown RBP11.75□□□□□ -0.53
GDE1-205ENST00000569899 RPS12P25398 132 aaKnown RBP11.75□□□□□ -0.53
GDE1-205ENST00000569899 MMP16P51512 607 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 TCP10Q12799 353 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 STK3Q13188 491 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 CCDC83Q8IWF9 413 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 ZFPM1Q8IX07 1006 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 NECAB1Q8N987 351 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 ZKSCAN3Q9BRR0 538 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 IDI2Q9BXS1 227 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 SENP2Q9HC62 589 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 SH2B1Q9NRF2 756 aaPredicted RBP11.75□□□□□ -0.53
GDE1-205ENST00000569899 RNF181Q9P0P0 153 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 MYH4Q9Y623 1939 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 COL2A1P02458 1487 aaPredicted RBP11.75□□□□□ -0.53
GDE1-205ENST00000569899 RANBP6O60518 1105 aaKnown RBP11.75□□□□□ -0.53
GDE1-205ENST00000569899 EGFRP00533 1210 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 PDE4BQ07343 736 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 FBXL16Q8N461 479 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 MTMR14Q8NCE2 650 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 ESR2Q92731 530 aa11.75□□□□□ -0.53
GDE1-205ENST00000569899 ZBED3Q96IU2 234 aaPredicted RBP11.75□□□□□ -0.53
GDE1-205ENST00000569899 ZSCAN31Q96LW9 406 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms