RNA–Protein interactions for RNA: ENST00000569637.6

NIP7-208, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 2 BASIC

Gene NIP7, Length 1,099 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-208ENST00000569637 IFNL3Q8IZI9 196 aa17.66■□□□□ 0.42
NIP7-208ENST00000569637 SOCS4Q8WXH5 440 aa17.66■□□□□ 0.42
NIP7-208ENST00000569637 TANGO6Q9C0B7 1094 aa17.66■□□□□ 0.42
NIP7-208ENST00000569637 RNF208Q9H0X6 261 aa17.66■□□□□ 0.42
NIP7-208ENST00000569637 VCPKMTQ9H867 229 aa17.66■□□□□ 0.42
NIP7-208ENST00000569637 TNRC18O15417 2968 aaPredicted RBP17.65■□□□□ 0.42
NIP7-208ENST00000569637 PDE4DIPQ5VU43 2346 aa17.65■□□□□ 0.42
NIP7-208ENST00000569637 SPDYE16A6NNV3 312 aaPredicted RBP17.65■□□□□ 0.42
NIP7-208ENST00000569637 Q3C1V9 767 aa17.65■□□□□ 0.42
NIP7-208ENST00000569637 B4GALNT3Q6L9W6 998 aa17.65■□□□□ 0.42
NIP7-208ENST00000569637 CHD1LQ86WJ1 897 aa17.65■□□□□ 0.42
NIP7-208ENST00000569637 TICAM2Q86XR7 235 aa17.65■□□□□ 0.42
NIP7-208ENST00000569637 NUDT12Q9BQG2 462 aa17.65■□□□□ 0.42
NIP7-208ENST00000569637 NAPBQ9H115 298 aa17.65■□□□□ 0.42
NIP7-208ENST00000569637 CWC22Q9HCG8 908 aaKnown RBP17.65■□□□□ 0.42
NIP7-208ENST00000569637 GJD2Q9UKL4 321 aa17.65■□□□□ 0.42
NIP7-208ENST00000569637 ZNF236Q9UL36 1845 aa17.65■□□□□ 0.42
NIP7-208ENST00000569637 WDR46O15213 610 aaKnown RBP17.64■□□□□ 0.41
NIP7-208ENST00000569637 CNMDO75829 334 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 IGHDP01880 384 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 HMGCRP04035 888 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 GJB1P08034 283 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 EEF2P13639 858 aaKnown RBP17.64■□□□□ 0.41
NIP7-208ENST00000569637 RASA1P20936 1047 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 ATP2B2Q01814 1243 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 NUCB1Q02818 461 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 COG2Q14746 738 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 POTEEQ6S8J3 1075 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 GPR142Q7Z601 462 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 SIAH1Q8IUQ4 282 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 STK11IPQ8N1F8 1099 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 PORCNQ9H237 461 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 GOPCQ9HD26 462 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 HOXC10Q9NYD6 342 aa17.64■□□□□ 0.41
NIP7-208ENST00000569637 SLC3A2P08195 630 aaKnown RBP17.63■□□□□ 0.41
NIP7-208ENST00000569637 GJA8P48165 433 aa17.63■□□□□ 0.41
NIP7-208ENST00000569637 PLEKHH3Q7Z736 793 aa17.63■□□□□ 0.41
NIP7-208ENST00000569637 SPICE1Q8N0Z3 855 aa17.63■□□□□ 0.41
NIP7-208ENST00000569637 UNC93B1Q9H1C4 597 aa17.63■□□□□ 0.41
NIP7-208ENST00000569637 HELLSQ9NRZ9 838 aa17.63■□□□□ 0.41
NIP7-208ENST00000569637 TRIM6-TRIM34B2RNG4 842 aa17.62■□□□□ 0.41
NIP7-208ENST00000569637 FLOT1O75955 427 aa17.62■□□□□ 0.41
NIP7-208ENST00000569637 XRCC5P13010 732 aaKnown RBP17.62■□□□□ 0.41
NIP7-208ENST00000569637 PDE4BQ07343 736 aa17.62■□□□□ 0.41
NIP7-208ENST00000569637 KIAA1755Q5JYT7 1200 aa17.62■□□□□ 0.41
NIP7-208ENST00000569637 CCDC129Q6ZRS4 1044 aa17.62■□□□□ 0.41
NIP7-208ENST00000569637 TRMT44Q8IYL2 757 aaKnown RBP17.62■□□□□ 0.41
NIP7-208ENST00000569637 ZNF444Q8N0Y2 327 aaPredicted RBP17.62■□□□□ 0.41
NIP7-208ENST00000569637 MB21D1Q8N884 522 aa17.62■□□□□ 0.41
NIP7-208ENST00000569637 BTBD7Q9P203 1132 aa17.62■□□□□ 0.41
NIP7-208ENST00000569637 CAPN2P17655 700 aa17.61■□□□□ 0.41
NIP7-208ENST00000569637 CYP2B6P20813 491 aa17.61■□□□□ 0.41
NIP7-208ENST00000569637 RGS2P41220 211 aa17.61■□□□□ 0.41
NIP7-208ENST00000569637 PPARAQ07869 468 aa17.61■□□□□ 0.41
NIP7-208ENST00000569637 PRPF38BQ5VTL8 546 aaKnown RBP17.61■□□□□ 0.41
NIP7-208ENST00000569637 U2AF1L4Q8WU68 220 aaKnown RBP17.61■□□□□ 0.41
NIP7-208ENST00000569637 SHISA4Q96DD7 197 aa17.61■□□□□ 0.41
NIP7-208ENST00000569637 APBA2Q99767 749 aa17.61■□□□□ 0.41
NIP7-208ENST00000569637 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.61■□□□□ 0.41
NIP7-208ENST00000569637 OSBPL3Q9H4L5 887 aa17.61■□□□□ 0.41
NIP7-208ENST00000569637 NYAP2Q9P242 653 aa17.61■□□□□ 0.41
NIP7-208ENST00000569637 IVNS1ABPQ9Y6Y0 642 aa17.61■□□□□ 0.41
NIP7-208ENST00000569637 PLIN4Q96Q06 1357 aa17.61■□□□□ 0.41
NIP7-208ENST00000569637 RAD21O60216 631 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 PRDM1O75626 825 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 DSG3P32926 999 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 MORN1Q5T089 497 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 WDR78Q5VTH9 848 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 PLEKHM2Q8IWE5 1019 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 TRIB2Q92519 343 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 USP6NLQ92738 828 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 RILPL2Q969X0 211 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 PAK6Q9NQU5 681 aaPredicted RBP17.6■□□□□ 0.41
NIP7-208ENST00000569637 FRMPD3Q5JV73 1810 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 ZNFX1Q9P2E3 1918 aaKnown RBP17.6■□□□□ 0.41
NIP7-208ENST00000569637 BRCA2P51587 3418 aa17.6■□□□□ 0.41
NIP7-208ENST00000569637 LAMA4Q16363 1823 aa17.59■□□□□ 0.41
NIP7-208ENST00000569637 SLC15A5A6NIM6 579 aa17.59■□□□□ 0.41
NIP7-208ENST00000569637 SGPL1O95470 568 aa17.59■□□□□ 0.41
NIP7-208ENST00000569637 ZKSCAN1P17029 563 aaPredicted RBP17.59■□□□□ 0.41
NIP7-208ENST00000569637 MCMDC2Q4G0Z9 681 aa17.59■□□□□ 0.41
NIP7-208ENST00000569637 RPTORQ8N122 1335 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 IGKV6D-41A0A0C4DH26 115 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 A0A0D9SFI3 127 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 FOXP2O15409 715 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 TSPY3P0CV98 308 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 TSPY8P0CW00 308 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 MAP2K5Q13163 448 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 SHCBP1Q8NEM2 672 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 ATG4CQ96DT6 458 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 FAM227BQ96M60 508 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 SPATC1LQ9H0A9 340 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.58■□□□□ 0.44e-6■■■■□ 24.6
NIP7-208ENST00000569637 HMX1Q9NP08 348 aaPredicted RBP17.58■□□□□ 0.4
NIP7-208ENST00000569637 PLXNA1Q9UIW2 1896 aa17.58■□□□□ 0.4
NIP7-208ENST00000569637 TTLL1O95922 423 aa17.57■□□□□ 0.4
NIP7-208ENST00000569637 PTPREP23469 700 aa17.57■□□□□ 0.4
NIP7-208ENST00000569637 NMIQ13287 307 aaPredicted RBP17.57■□□□□ 0.4
NIP7-208ENST00000569637 GRB14Q14449 540 aa17.57■□□□□ 0.4
NIP7-208ENST00000569637 FAM83BQ5T0W9 1011 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms