RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
CNOT1-215ENST00000569020 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
CNOT1-215ENST00000569020 ATP8A2Q9NTI2 1148 aa16.48■□□□□ 0.23
CNOT1-215ENST00000569020 HOXC10Q9NYD6 342 aa16.48■□□□□ 0.23
CNOT1-215ENST00000569020 RCAN3Q9UKA8 241 aa16.48■□□□□ 0.23
CNOT1-215ENST00000569020 RLFQ13129 1914 aa16.48■□□□□ 0.23
CNOT1-215ENST00000569020 A0A0G2JMZ2 1700 aa16.48■□□□□ 0.23
CNOT1-215ENST00000569020 PARP14Q460N5 1801 aa16.47■□□□□ 0.23
CNOT1-215ENST00000569020 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
CNOT1-215ENST00000569020 MBD4O95243 580 aa16.47■□□□□ 0.23
CNOT1-215ENST00000569020 CYP2D6P10635 497 aa16.47■□□□□ 0.23
CNOT1-215ENST00000569020 ATP2B2Q01814 1243 aa16.47■□□□□ 0.23
CNOT1-215ENST00000569020 HAUS7Q99871 368 aa16.47■□□□□ 0.23
CNOT1-215ENST00000569020 ARHGEF10LQ9HCE6 1279 aa16.47■□□□□ 0.23
CNOT1-215ENST00000569020 ZNF236Q9UL36 1845 aa16.47■□□□□ 0.23
CNOT1-215ENST00000569020 PRKAB2O43741 272 aa16.46■□□□□ 0.23
CNOT1-215ENST00000569020 BMP8BP34820 402 aa16.46■□□□□ 0.23
CNOT1-215ENST00000569020 GRB14Q14449 540 aa16.46■□□□□ 0.23
CNOT1-215ENST00000569020 LHX8Q68G74 356 aa16.46■□□□□ 0.23
CNOT1-215ENST00000569020 ZSCAN25Q6NSZ9 544 aa16.46■□□□□ 0.23
CNOT1-215ENST00000569020 SLC44A5Q8NCS7 719 aa16.46■□□□□ 0.23
CNOT1-215ENST00000569020 DYNLL2Q96FJ2 89 aa16.46■□□□□ 0.23
CNOT1-215ENST00000569020 LRRCC1Q9C099 1032 aa16.46■□□□□ 0.23
CNOT1-215ENST00000569020 SH2D4AQ9H788 454 aa16.46■□□□□ 0.23
CNOT1-215ENST00000569020 ZMYND8Q9ULU4 1186 aaPredicted RBP16.46■□□□□ 0.23
CNOT1-215ENST00000569020 PFASO15067 1338 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 COL11A1P12107 1806 aaPredicted RBP16.45■□□□□ 0.22
CNOT1-215ENST00000569020 ZNFX1Q9P2E3 1918 aaKnown RBP16.45■□□□□ 0.22
CNOT1-215ENST00000569020 MSCO60682 206 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 HOXC6P09630 235 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 SYN1P17600 705 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 UBE3CQ15386 1083 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 SLFNL1Q499Z3 407 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 DPP9Q86TI2 863 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 LPAR1Q92633 364 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 CCDC17Q96LX7 622 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 GDF15Q99988 308 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 FLRT1Q9NZU1 646 aa16.45■□□□□ 0.22
CNOT1-215ENST00000569020 STRNO43815 780 aa16.44■□□□□ 0.22
CNOT1-215ENST00000569020 COL6A1P12109 1028 aa16.44■□□□□ 0.22
CNOT1-215ENST00000569020 AKR1B1P15121 316 aa16.44■□□□□ 0.22
CNOT1-215ENST00000569020 CNGA1P29973 690 aa16.44■□□□□ 0.22
CNOT1-215ENST00000569020 ICA1Q05084 483 aa16.44■□□□□ 0.22
CNOT1-215ENST00000569020 C12orf60Q5U649 245 aa16.44■□□□□ 0.22
CNOT1-215ENST00000569020 MB21D1Q8N884 522 aa16.44■□□□□ 0.22
CNOT1-215ENST00000569020 NPLOC4Q8TAT6 608 aa16.44■□□□□ 0.22
CNOT1-215ENST00000569020 MOV10L1Q9BXT6 1211 aaKnown RBP16.44■□□□□ 0.22
CNOT1-215ENST00000569020 DDX20Q9UHI6 824 aaKnown RBP16.44■□□□□ 0.22
CNOT1-215ENST00000569020 TMX2Q9Y320 296 aa16.44■□□□□ 0.22
CNOT1-215ENST00000569020 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
CNOT1-215ENST00000569020 USP17L12C9JPN9 530 aa16.43■□□□□ 0.22
CNOT1-215ENST00000569020 USP17L21D6R901 530 aa16.43■□□□□ 0.22
CNOT1-215ENST00000569020 FLOT1O75955 427 aa16.43■□□□□ 0.22
CNOT1-215ENST00000569020 DSG3P32926 999 aa16.43■□□□□ 0.22
CNOT1-215ENST00000569020 CDK8P49336 464 aa16.43■□□□□ 0.22
CNOT1-215ENST00000569020 SHCBP1Q8NEM2 672 aa16.43■□□□□ 0.22
CNOT1-215ENST00000569020 SPATC1LQ9H0A9 340 aa16.43■□□□□ 0.22
CNOT1-215ENST00000569020 VCPKMTQ9H867 229 aa16.43■□□□□ 0.22
CNOT1-215ENST00000569020 SLC5A4Q9NY91 659 aa16.43■□□□□ 0.22
CNOT1-215ENST00000569020 WDR46O15213 610 aaKnown RBP16.42■□□□□ 0.22
CNOT1-215ENST00000569020 ERCC3P19447 782 aa16.42■□□□□ 0.22
CNOT1-215ENST00000569020 ADORA2AP29274 412 aa16.42■□□□□ 0.22
CNOT1-215ENST00000569020 CYP2C19P33261 490 aa16.42■□□□□ 0.22
CNOT1-215ENST00000569020 PLS1Q14651 629 aa16.42■□□□□ 0.22
CNOT1-215ENST00000569020 KIAA1755Q5JYT7 1200 aa16.42■□□□□ 0.22
CNOT1-215ENST00000569020 C16orf86Q6ZW13 317 aa16.42■□□□□ 0.22
CNOT1-215ENST00000569020 CLEC10AQ8IUN9 316 aa16.42■□□□□ 0.22
CNOT1-215ENST00000569020 SPICE1Q8N0Z3 855 aa16.42■□□□□ 0.22
CNOT1-215ENST00000569020 CYP2D7A0A087X1C5 515 aa16.41■□□□□ 0.22
CNOT1-215ENST00000569020 SOX1O00570 391 aaPredicted RBP16.41■□□□□ 0.22
CNOT1-215ENST00000569020 SMARCA5O60264 1052 aaPredicted RBP16.41■□□□□ 0.22
CNOT1-215ENST00000569020 CHGBP05060 677 aa16.41■□□□□ 0.22
CNOT1-215ENST00000569020 MAGEA10P43363 369 aaPredicted RBP16.41■□□□□ 0.22
CNOT1-215ENST00000569020 OLFML2BQ68BL8 750 aa16.41■□□□□ 0.22
CNOT1-215ENST00000569020 NCAPG2Q86XI2 1143 aa16.41■□□□□ 0.22
CNOT1-215ENST00000569020 SIAH1Q8IUQ4 282 aa16.41■□□□□ 0.22
CNOT1-215ENST00000569020 LRCH3Q96II8 777 aa16.41■□□□□ 0.22
CNOT1-215ENST00000569020 PUS7LQ9H0K6 701 aaKnown RBP16.41■□□□□ 0.22
CNOT1-215ENST00000569020 MROH8Q9H579 483 aa16.41■□□□□ 0.22
CNOT1-215ENST00000569020 KANSL2Q9H9L4 492 aa16.41■□□□□ 0.22
CNOT1-215ENST00000569020 ARPP21Q9UBL0 812 aaPredicted RBP16.41■□□□□ 0.22
CNOT1-215ENST00000569020 PLXNA1Q9UIW2 1896 aa16.41■□□□□ 0.22
CNOT1-215ENST00000569020 EEF2P13639 858 aaKnown RBP16.4■□□□□ 0.22
CNOT1-215ENST00000569020 LRRC26Q2I0M4 334 aa16.4■□□□□ 0.22
CNOT1-215ENST00000569020 C20orf194Q5TEA3 1177 aa16.4■□□□□ 0.22
CNOT1-215ENST00000569020 CTR9Q6PD62 1173 aa16.4■□□□□ 0.22
CNOT1-215ENST00000569020 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
CNOT1-215ENST00000569020 ATG4CQ96DT6 458 aa16.4■□□□□ 0.22
CNOT1-215ENST00000569020 SENP6Q9GZR1 1112 aaPredicted RBP16.4■□□□□ 0.22
CNOT1-215ENST00000569020 ECHDC1Q9NTX5 307 aa16.4■□□□□ 0.22
CNOT1-215ENST00000569020 GREB1LQ9C091 1923 aaPredicted RBP16.4■□□□□ 0.22
CNOT1-215ENST00000569020 MYH4Q9Y623 1939 aa16.39■□□□□ 0.21
CNOT1-215ENST00000569020 SMIM22K7EJ46 135 aa16.39■□□□□ 0.21
CNOT1-215ENST00000569020 DNM1LO00429 736 aa16.39■□□□□ 0.21
CNOT1-215ENST00000569020 CYBAP13498 195 aa16.39■□□□□ 0.21
CNOT1-215ENST00000569020 TDHQ8IZJ6 230 aa16.39■□□□□ 0.21
CNOT1-215ENST00000569020 ABRAQ8N0Z2 381 aa16.39■□□□□ 0.21
CNOT1-215ENST00000569020 GPATCH3Q96I76 525 aa16.39■□□□□ 0.21
CNOT1-215ENST00000569020 UBE2OQ9C0C9 1292 aaKnown RBP16.39■□□□□ 0.21
CNOT1-215ENST00000569020 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms