RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 DNM1LO00429 736 aa18.83■□□□□ 0.6
PALB2-205ENST00000567003 MPHOSPH10O00566 681 aaKnown RBP18.83■□□□□ 0.6
PALB2-205ENST00000567003 IGSF3O75054 1194 aa18.83■□□□□ 0.6
PALB2-205ENST00000567003 IGHA2P01877 340 aa18.83■□□□□ 0.6
PALB2-205ENST00000567003 MYCNP04198 464 aaPredicted RBP18.83■□□□□ 0.6
PALB2-205ENST00000567003 POLR3DP05423 398 aaPredicted RBP18.83■□□□□ 0.6
PALB2-205ENST00000567003 CYP2D6P10635 497 aa18.83■□□□□ 0.6
PALB2-205ENST00000567003 ADORA2AP29274 412 aa18.83■□□□□ 0.6
PALB2-205ENST00000567003 MAP3K12Q12852 859 aa18.83■□□□□ 0.6
PALB2-205ENST00000567003 AACSQ86V21 672 aa18.83■□□□□ 0.6
PALB2-205ENST00000567003 CLEC10AQ8IUN9 316 aa18.83■□□□□ 0.6
PALB2-205ENST00000567003 COL25A1Q9BXS0 654 aaPredicted RBP18.83■□□□□ 0.6
PALB2-205ENST00000567003 MAGEB6P1A0A0J9YX57 407 aa18.82■□□□□ 0.6
PALB2-205ENST00000567003 MSCO60682 206 aa18.82■□□□□ 0.6
PALB2-205ENST00000567003 GABPAQ06546 454 aa18.82■□□□□ 0.6
PALB2-205ENST00000567003 DPP9Q86TI2 863 aa18.82■□□□□ 0.6
PALB2-205ENST00000567003 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
PALB2-205ENST00000567003 SLC44A5Q8NCS7 719 aa18.82■□□□□ 0.6
PALB2-205ENST00000567003 TANGO6Q9C0B7 1094 aa18.82■□□□□ 0.6
PALB2-205ENST00000567003 SPTBN5Q9NRC6 3674 aaKnown RBP18.82■□□□□ 0.6
PALB2-205ENST00000567003 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 COBLO75128 1261 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 ERCC3P19447 782 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 PRAMEF19Q5SWL8 479 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 C9orf50Q5SZB4 431 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 CEP85Q6P2H3 762 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 CERS3Q8IU89 383 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 SDR42E1Q8WUS8 393 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 SPATC1LQ9H0A9 340 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 IL1RAPL2Q9NP60 686 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 PRDM5Q9NQX1 630 aaPredicted RBP18.81■□□□□ 0.6
PALB2-205ENST00000567003 MCM9Q9NXL9 1143 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 PRKAG2Q9UGJ0 569 aa18.81■□□□□ 0.6
PALB2-205ENST00000567003 MYH8P13535 1937 aa18.8■□□□□ 0.6
PALB2-205ENST00000567003 PDE6AP16499 860 aa18.8■□□□□ 0.6
PALB2-205ENST00000567003 SHHQ15465 462 aa18.8■□□□□ 0.6
PALB2-205ENST00000567003 TRIM60Q495X7 471 aa18.8■□□□□ 0.6
PALB2-205ENST00000567003 FAM109BQ6ICB4 259 aaPredicted RBP18.8■□□□□ 0.6
PALB2-205ENST00000567003 SAMD1Q6SPF0 538 aaPredicted RBP18.8■□□□□ 0.6
PALB2-205ENST00000567003 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.8■□□□□ 0.6
PALB2-205ENST00000567003 PLS1Q14651 629 aa18.79■□□□□ 0.6
PALB2-205ENST00000567003 COG2Q14746 738 aa18.79■□□□□ 0.6
PALB2-205ENST00000567003 OLFML2BQ68BL8 750 aa18.79■□□□□ 0.6
PALB2-205ENST00000567003 SLC39A5Q6ZMH5 540 aa18.79■□□□□ 0.6
PALB2-205ENST00000567003 FERMT2Q96AC1 680 aa18.79■□□□□ 0.6
PALB2-205ENST00000567003 DYNLL2Q96FJ2 89 aa18.79■□□□□ 0.6
PALB2-205ENST00000567003 CRNKL1Q9BZJ0 848 aaKnown RBP18.79■□□□□ 0.6
PALB2-205ENST00000567003 BCL11AQ9H165 835 aa18.79■□□□□ 0.6
PALB2-205ENST00000567003 PARP14Q460N5 1801 aa18.79■□□□□ 0.6
PALB2-205ENST00000567003 BAZ2AQ9UIF9 1905 aaKnown RBP18.78■□□□□ 0.6
PALB2-205ENST00000567003 ZNF532Q9HCE3 1301 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 KBTBD13C9JR72 458 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 SMIM22K7EJ46 135 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 SLFNL1Q499Z3 407 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 SLC9C2Q5TAH2 1124 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 ZNF697Q5TEC3 545 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 SH3RF1Q7Z6J0 888 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 SPICE1Q8N0Z3 855 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 LCORLQ8N3X6 602 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 BADQ92934 168 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 ATG4CQ96DT6 458 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 COL11A1P12107 1806 aaPredicted RBP18.78■□□□□ 0.6
PALB2-205ENST00000567003 ZNFX1Q9P2E3 1918 aaKnown RBP18.78■□□□□ 0.6
PALB2-205ENST00000567003 SMCHD1A6NHR9 2005 aa18.78■□□□□ 0.6
PALB2-205ENST00000567003 APBB1O00213 710 aa18.77■□□□□ 0.6
PALB2-205ENST00000567003 AKR1B1P15121 316 aa18.77■□□□□ 0.6
PALB2-205ENST00000567003 ADCYAP1R1P41586 468 aa18.77■□□□□ 0.6
PALB2-205ENST00000567003 FAM47AQ5JRC9 791 aa18.77■□□□□ 0.6
PALB2-205ENST00000567003 NCAPG2Q86XI2 1143 aa18.77■□□□□ 0.6
PALB2-205ENST00000567003 ARRDC4Q8NCT1 418 aa18.77■□□□□ 0.6
PALB2-205ENST00000567003 DNAJC2Q99543 621 aaKnown RBP18.77■□□□□ 0.6
PALB2-205ENST00000567003 DCP1AQ9NPI6 582 aaPredicted RBP18.77■□□□□ 0.6
PALB2-205ENST00000567003 PDLIM7Q9NR12 457 aa18.77■□□□□ 0.6
PALB2-205ENST00000567003 HOXC10Q9NYD6 342 aa18.77■□□□□ 0.6
PALB2-205ENST00000567003 TCRBV5S4A2TA0A5A2 114 aa18.76■□□□□ 0.59
PALB2-205ENST00000567003 GOLIM4O00461 696 aa18.76■□□□□ 0.59
PALB2-205ENST00000567003 SEPT4O43236 478 aa18.76■□□□□ 0.59
PALB2-205ENST00000567003 FLOT1O75955 427 aa18.76■□□□□ 0.59
PALB2-205ENST00000567003 DSG3P32926 999 aa18.76■□□□□ 0.59
PALB2-205ENST00000567003 LRRC41Q15345 812 aa18.76■□□□□ 0.59
PALB2-205ENST00000567003 SIAH1Q8IUQ4 282 aa18.76■□□□□ 0.59
PALB2-205ENST00000567003 SHCBP1Q8NEM2 672 aa18.76■□□□□ 0.59
PALB2-205ENST00000567003 CDX2Q99626 313 aaPredicted RBP18.76■□□□□ 0.59
PALB2-205ENST00000567003 ARMT1Q9H993 441 aa18.76■□□□□ 0.59
PALB2-205ENST00000567003 CYP2D7A0A087X1C5 515 aa18.75■□□□□ 0.59
PALB2-205ENST00000567003 TRIM43BA6NCK2 446 aa18.75■□□□□ 0.59
PALB2-205ENST00000567003 PRKAB2O43741 272 aa18.75■□□□□ 0.59
PALB2-205ENST00000567003 STRNO43815 780 aa18.75■□□□□ 0.59
PALB2-205ENST00000567003 TMEM179Q6ZVK1 233 aa18.75■□□□□ 0.59
PALB2-205ENST00000567003 POTEDQ86YR6 584 aa18.75■□□□□ 0.59
PALB2-205ENST00000567003 ERC1Q8IUD2 1116 aa18.75■□□□□ 0.59
PALB2-205ENST00000567003 TRIM43Q96BQ3 446 aaPredicted RBP18.75■□□□□ 0.59
PALB2-205ENST00000567003 MAML3Q96JK9 1138 aa18.75■□□□□ 0.59
PALB2-205ENST00000567003 ICA1Q05084 483 aa18.74■□□□□ 0.59
PALB2-205ENST00000567003 SNX17Q15036 470 aa18.74■□□□□ 0.59
PALB2-205ENST00000567003 RHPN1Q8TCX5 695 aa18.74■□□□□ 0.59
PALB2-205ENST00000567003 PANK1Q8TE04 598 aa18.74■□□□□ 0.59
PALB2-205ENST00000567003 SEMA6BQ9H3T3 888 aa18.74■□□□□ 0.59
PALB2-205ENST00000567003 PLXNA1Q9UIW2 1896 aa18.73■□□□□ 0.59
PALB2-205ENST00000567003 CHGBP05060 677 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms