RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 KIAA1755Q5JYT7 1200 aa25.3■■□□□ 1.64
CHD9-208ENST00000563410 TMEM179Q6ZVK1 233 aa25.3■■□□□ 1.64
CHD9-208ENST00000563410 ATP8A2Q9NTI2 1148 aa25.3■■□□□ 1.64
CHD9-208ENST00000563410 PFASO15067 1338 aa25.3■■□□□ 1.64
CHD9-208ENST00000563410 ZNF236Q9UL36 1845 aa25.29■■□□□ 1.64
CHD9-208ENST00000563410 GLRX3O76003 335 aaKnown RBP25.29■■□□□ 1.64
CHD9-208ENST00000563410 WDR78Q5VTH9 848 aa25.29■■□□□ 1.64
CHD9-208ENST00000563410 SIAH1Q8IUQ4 282 aa25.29■■□□□ 1.64
CHD9-208ENST00000563410 C7orf61Q8IZ16 206 aa25.29■■□□□ 1.64
CHD9-208ENST00000563410 LRRCC1Q9C099 1032 aa25.29■■□□□ 1.64
CHD9-208ENST00000563410 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.29■■□□□ 1.64
CHD9-208ENST00000563410 STAP2Q9UGK3 403 aa25.29■■□□□ 1.64
CHD9-208ENST00000563410 ZNFX1Q9P2E3 1918 aaKnown RBP25.29■■□□□ 1.64
CHD9-208ENST00000563410 CYP2D7A0A087X1C5 515 aa25.28■■□□□ 1.64
CHD9-208ENST00000563410 SMARCA5O60264 1052 aaPredicted RBP25.28■■□□□ 1.64
CHD9-208ENST00000563410 AKR1B1P15121 316 aa25.28■■□□□ 1.64
CHD9-208ENST00000563410 GRB14Q14449 540 aa25.28■■□□□ 1.64
CHD9-208ENST00000563410 UBE3CQ15386 1083 aa25.28■■□□□ 1.64
CHD9-208ENST00000563410 CLEC10AQ8IUN9 316 aa25.28■■□□□ 1.64
CHD9-208ENST00000563410 COL11A1P12107 1806 aaPredicted RBP25.28■■□□□ 1.64
CHD9-208ENST00000563410 A0A1W2PPC1 479 aa25.27■■□□□ 1.64
CHD9-208ENST00000563410 HOXC6P09630 235 aa25.27■■□□□ 1.64
CHD9-208ENST00000563410 COG2Q14746 738 aa25.27■■□□□ 1.64
CHD9-208ENST00000563410 C12orf60Q5U649 245 aa25.27■■□□□ 1.64
CHD9-208ENST00000563410 COL6A1P12109 1028 aa25.26■■□□□ 1.63
CHD9-208ENST00000563410 CDK8P49336 464 aa25.26■■□□□ 1.63
CHD9-208ENST00000563410 NPLOC4Q8TAT6 608 aa25.26■■□□□ 1.63
CHD9-208ENST00000563410 HOXC10Q9NYD6 342 aa25.26■■□□□ 1.63
CHD9-208ENST00000563410 USP17L12C9JPN9 530 aa25.25■■□□□ 1.63
CHD9-208ENST00000563410 USP17L21D6R901 530 aa25.25■■□□□ 1.63
CHD9-208ENST00000563410 IGHA2P01877 340 aa25.25■■□□□ 1.63
CHD9-208ENST00000563410 GDF15Q99988 308 aa25.25■■□□□ 1.63
CHD9-208ENST00000563410 MOV10L1Q9BXT6 1211 aaKnown RBP25.25■■□□□ 1.63
CHD9-208ENST00000563410 TANGO6Q9C0B7 1094 aa25.25■■□□□ 1.63
CHD9-208ENST00000563410 PUS7LQ9H0K6 701 aaKnown RBP25.25■■□□□ 1.63
CHD9-208ENST00000563410 ZMYND8Q9ULU4 1186 aaPredicted RBP25.25■■□□□ 1.63
CHD9-208ENST00000563410 TMX2Q9Y320 296 aa25.25■■□□□ 1.63
CHD9-208ENST00000563410 IVNS1ABPQ9Y6Y0 642 aa25.25■■□□□ 1.63
CHD9-208ENST00000563410 GREB1LQ9C091 1923 aaPredicted RBP25.25■■□□□ 1.63
CHD9-208ENST00000563410 ICA1Q05084 483 aa25.24■■□□□ 1.63
CHD9-208ENST00000563410 MFSD14CQ5VZR4 134 aa25.24■■□□□ 1.63
CHD9-208ENST00000563410 C16orf86Q6ZW13 317 aa25.24■■□□□ 1.63
CHD9-208ENST00000563410 CCDC17Q96LX7 622 aa25.24■■□□□ 1.63
CHD9-208ENST00000563410 SLC4A4Q9Y6R1 1079 aa25.24■■□□□ 1.63
CHD9-208ENST00000563410 DNAH12Q6ZR08 3092 aa25.23■■□□□ 1.63
CHD9-208ENST00000563410 DSG3P32926 999 aa25.23■■□□□ 1.63
CHD9-208ENST00000563410 LPAR1Q92633 364 aa25.23■■□□□ 1.63
CHD9-208ENST00000563410 SPATC1LQ9H0A9 340 aa25.23■■□□□ 1.63
CHD9-208ENST00000563410 VCPKMTQ9H867 229 aa25.23■■□□□ 1.63
CHD9-208ENST00000563410 ARHGEF10LQ9HCE6 1279 aa25.23■■□□□ 1.63
CHD9-208ENST00000563410 SOX1O00570 391 aaPredicted RBP25.22■■□□□ 1.63
CHD9-208ENST00000563410 SYN1P17600 705 aa25.22■■□□□ 1.63
CHD9-208ENST00000563410 BMP8BP34820 402 aa25.22■■□□□ 1.63
CHD9-208ENST00000563410 ATP2B2Q01814 1243 aa25.22■■□□□ 1.63
CHD9-208ENST00000563410 ZSCAN25Q6NSZ9 544 aa25.22■■□□□ 1.63
CHD9-208ENST00000563410 CTR9Q6PD62 1173 aa25.22■■□□□ 1.63
CHD9-208ENST00000563410 SPICE1Q8N0Z3 855 aa25.22■■□□□ 1.63
CHD9-208ENST00000563410 ERCC3P19447 782 aa25.21■■□□□ 1.63
CHD9-208ENST00000563410 ADORA2AP29274 412 aa25.21■■□□□ 1.63
CHD9-208ENST00000563410 CYP2C19P33261 490 aa25.21■■□□□ 1.63
CHD9-208ENST00000563410 SHCBP1Q8NEM2 672 aa25.21■■□□□ 1.63
CHD9-208ENST00000563410 TRPV1Q8NER1 839 aa25.21■■□□□ 1.63
CHD9-208ENST00000563410 STRNO43815 780 aa25.2■■□□□ 1.62
CHD9-208ENST00000563410 FLOT1O75955 427 aa25.2■■□□□ 1.62
CHD9-208ENST00000563410 AMOTL1Q8IY63 956 aa25.2■■□□□ 1.62
CHD9-208ENST00000563410 MB21D1Q8N884 522 aa25.2■■□□□ 1.62
CHD9-208ENST00000563410 ATG4CQ96DT6 458 aa25.2■■□□□ 1.62
CHD9-208ENST00000563410 DCTPP1Q9H773 170 aa25.2■■□□□ 1.62
CHD9-208ENST00000563410 SH2D4AQ9H788 454 aa25.2■■□□□ 1.62
CHD9-208ENST00000563410 ECHDC1Q9NTX5 307 aa25.2■■□□□ 1.62
CHD9-208ENST00000563410 DDX20Q9UHI6 824 aaKnown RBP25.2■■□□□ 1.62
CHD9-208ENST00000563410 LRRC26Q2I0M4 334 aa25.19■■□□□ 1.62
CHD9-208ENST00000563410 DDRGK1Q96HY6 314 aa25.19■■□□□ 1.62
CHD9-208ENST00000563410 SMCHD1A6NHR9 2005 aa25.19■■□□□ 1.62
CHD9-208ENST00000563410 PLXNA1Q9UIW2 1896 aa25.18■■□□□ 1.62
CHD9-208ENST00000563410 WDR46O15213 610 aaKnown RBP25.18■■□□□ 1.62
CHD9-208ENST00000563410 CYBAP13498 195 aa25.18■■□□□ 1.62
CHD9-208ENST00000563410 EEF2P13639 858 aaKnown RBP25.18■■□□□ 1.62
CHD9-208ENST00000563410 DPP9Q86TI2 863 aa25.18■■□□□ 1.62
CHD9-208ENST00000563410 STRBPQ96SI9 672 aaKnown RBP25.18■■□□□ 1.62
CHD9-208ENST00000563410 COBLO75128 1261 aa25.17■■□□□ 1.62
CHD9-208ENST00000563410 CNGA1P29973 690 aa25.17■■□□□ 1.62
CHD9-208ENST00000563410 MAGEA10P43363 369 aaPredicted RBP25.17■■□□□ 1.62
CHD9-208ENST00000563410 OLFML2BQ68BL8 750 aa25.17■■□□□ 1.62
CHD9-208ENST00000563410 KBTBD3Q8NAB2 608 aa25.17■■□□□ 1.62
CHD9-208ENST00000563410 LRCH3Q96II8 777 aa25.17■■□□□ 1.62
CHD9-208ENST00000563410 KANSL2Q9H9L4 492 aa25.17■■□□□ 1.62
CHD9-208ENST00000563410 ARPP21Q9UBL0 812 aaPredicted RBP25.17■■□□□ 1.62
CHD9-208ENST00000563410 MYH4Q9Y623 1939 aa25.17■■□□□ 1.62
CHD9-208ENST00000563410 GSG1L2A8MUP6 293 aa25.16■■□□□ 1.62
CHD9-208ENST00000563410 MSCO60682 206 aa25.16■■□□□ 1.62
CHD9-208ENST00000563410 PLS1Q14651 629 aa25.16■■□□□ 1.62
CHD9-208ENST00000563410 TSHZ3Q63HK5 1081 aa25.16■■□□□ 1.62
CHD9-208ENST00000563410 OSBP2Q969R2 916 aa25.16■■□□□ 1.62
CHD9-208ENST00000563410 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.16■■□□□ 1.62
CHD9-208ENST00000563410 MROH8Q9H579 483 aa25.16■■□□□ 1.62
CHD9-208ENST00000563410 ADAMTS5Q9UNA0 930 aa25.16■■□□□ 1.62
CHD9-208ENST00000563410 TMEM132BQ14DG7 1078 aa25.15■■□□□ 1.62
CHD9-208ENST00000563410 SBK1Q52WX2 424 aa25.15■■□□□ 1.62
CHD9-208ENST00000563410 NCAPG2Q86XI2 1143 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms