RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 TMX2Q9Y320 296 aa13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 ZNFX1Q9P2E3 1918 aaKnown RBP13.28□□□□□ -0.28
LPCAT4-202ENST00000562404 A0A0D9SFI3 127 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 APPP05067 770 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 GNAT2P19087 354 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 TDO2P48775 406 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 TRIM32Q13049 653 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 AMOTL1Q8IY63 956 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 GPRC5AQ8NFJ5 357 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 COA7Q96BR5 231 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 UNC93B1Q9H1C4 597 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 INCENPQ9NQS7 918 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
LPCAT4-202ENST00000562404 IGKV6D-41A0A0C4DH26 115 aa13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 INHAP05111 366 aa13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 CCL5P13501 91 aa13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 PDE4AP27815 886 aa13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 LBX2Q6XYB7 198 aa13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 ZNF589Q86UQ0 364 aaPredicted RBP13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 SLAIN1Q8ND83 568 aa13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 PXYLP1Q8TE99 480 aa13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 TMEM106CQ9BVX2 250 aa13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 VCPKMTQ9H867 229 aa13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 ARHGEF10LQ9HCE6 1279 aa13.26□□□□□ -0.29
LPCAT4-202ENST00000562404 CYP2B6P20813 491 aa13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 ATP2B2Q01814 1243 aa13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 NMIQ13287 307 aaPredicted RBP13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 LRRFIP1Q32MZ4 808 aaKnown RBP13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 GPR142Q7Z601 462 aa13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 USP6NLQ92738 828 aa13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 TANGO6Q9C0B7 1094 aa13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 OSBPL3Q9H4L5 887 aa13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 MKNK2Q9HBH9 465 aa13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 FBXO28Q9NVF7 368 aa13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 BIN2Q9UBW5 565 aaPredicted RBP13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 RABGAP1Q9Y3P9 1069 aa13.25□□□□□ -0.29
LPCAT4-202ENST00000562404 ALPK3Q96L96 1907 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 DSG3P32926 999 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 CTDSPL2Q05D32 466 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 PPARAQ07869 468 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 COG2Q14746 738 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 CCL14Q16627 93 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 FAM47AQ5JRC9 791 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 MORN1Q5T089 497 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 GTF3C2Q8WUA4 911 aaPredicted RBP13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 TRIB2Q92519 343 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 RILPL2Q969X0 211 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 ATG4CQ96DT6 458 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 RNF208Q9H0X6 261 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 NAPBQ9H115 298 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 FRMPD3Q5JV73 1810 aa13.24□□□□□ -0.29
LPCAT4-202ENST00000562404 TRIM6-TRIM34B2RNG4 842 aa13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 GJB1P08034 283 aa13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 MAPK4P31152 587 aa13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 UBXN2AP68543 259 aa13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 NKX2-3Q8TAU0 364 aa13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 LPAR1Q92633 364 aa13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 NUP88Q99567 741 aaPredicted RBP13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 HELLSQ9NRZ9 838 aa13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 LAMA4Q16363 1823 aa13.23□□□□□ -0.29
LPCAT4-202ENST00000562404 WDR46O15213 610 aaKnown RBP13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 FLOT1O75955 427 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 SDSP20132 328 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 GJA8P48165 433 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 MCMDC2Q4G0Z9 681 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 FAM83BQ5T0W9 1011 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 SAMD1Q6SPF0 538 aaPredicted RBP13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 PLEKHH3Q7Z736 793 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 NUDT12Q9BQG2 462 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 MOV10L1Q9BXT6 1211 aaKnown RBP13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 NACAP1Q9BZK3 213 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 PAK6Q9NQU5 681 aaPredicted RBP13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 FLRT1Q9NZU1 646 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 NYAP2Q9P242 653 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 PLXNA1Q9UIW2 1896 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 ZNF236Q9UL36 1845 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 SMCHD1A6NHR9 2005 aa13.22□□□□□ -0.29
LPCAT4-202ENST00000562404 PLIN4Q96Q06 1357 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 NDUFB10O96000 172 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 FGAP02671 866 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 HMGCRP04035 888 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 HSPD1P10809 573 aaKnown RBP13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 TMEM132BQ14DG7 1078 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 UBE2Q1Q7Z7E8 422 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 ZNF444Q8N0Y2 327 aaPredicted RBP13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 NEDD1Q8NHV4 660 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 NPLOC4Q8TAT6 608 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 NBPF3Q9H094 633 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 SPATC1LQ9H0A9 340 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 IL25Q9H293 177 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 SH2D4AQ9H788 454 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 MTMR4Q9NYA4 1195 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 HOXC10Q9NYD6 342 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms