RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 KIF28PB7ZC32 967 aa19.78■□□□□ 0.76
HDDC3-206ENST00000561036 YEATS4O95619 227 aa19.78■□□□□ 0.76
HDDC3-206ENST00000561036 PARP1P09874 1014 aaKnown RBP19.78■□□□□ 0.76
HDDC3-206ENST00000561036 PFKFB3Q16875 520 aaPredicted RBP19.78■□□□□ 0.76
HDDC3-206ENST00000561036 CERKLQ49MI3 558 aaPredicted RBP19.78■□□□□ 0.76
HDDC3-206ENST00000561036 USP28Q96RU2 1077 aa19.78■□□□□ 0.76
HDDC3-206ENST00000561036 SPZ1Q9BXG8 430 aa19.78■□□□□ 0.76
HDDC3-206ENST00000561036 SH3GLB2Q9NR46 395 aa19.78■□□□□ 0.76
HDDC3-206ENST00000561036 MYH6P13533 1939 aa19.78■□□□□ 0.76
HDDC3-206ENST00000561036 SCG2P13521 617 aa19.77■□□□□ 0.76
HDDC3-206ENST00000561036 NASPP49321 788 aaPredicted RBP19.77■□□□□ 0.76
HDDC3-206ENST00000561036 ZNF445P59923 1031 aa19.77■□□□□ 0.76
HDDC3-206ENST00000561036 RASSF7Q02833 373 aa19.77■□□□□ 0.76
HDDC3-206ENST00000561036 ASPRV1Q53RT3 343 aa19.77■□□□□ 0.76
HDDC3-206ENST00000561036 NOSTRINQ8IVI9 506 aa19.77■□□□□ 0.76
HDDC3-206ENST00000561036 KANSL2Q9H9L4 492 aa19.77■□□□□ 0.76
HDDC3-206ENST00000561036 MYOZ2Q9NPC6 264 aa19.77■□□□□ 0.76
HDDC3-206ENST00000561036 CNTNAP1P78357 1384 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 UBE2Q2LH0YL09 131 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 LETM1O95202 739 aaPredicted RBP19.76■□□□□ 0.75
HDDC3-206ENST00000561036 ZSCAN23Q3MJ62 389 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 TMEM179Q6ZVK1 233 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 DIS3L2Q8IYB7 885 aaKnown RBP19.76■□□□□ 0.75
HDDC3-206ENST00000561036 STAG2Q8N3U4 1231 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 KCNG4Q8TDN1 519 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 MKL1Q969V6 931 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 CSRNP1Q96S65 589 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 PHF20Q9BVI0 1012 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 BRMS1Q9HCU9 246 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 TMEM63CQ9P1W3 806 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 NYAP2Q9P242 653 aa19.76■□□□□ 0.75
HDDC3-206ENST00000561036 CLRN2A0PK11 232 aa19.75■□□□□ 0.75
HDDC3-206ENST00000561036 TCP10L2B9ZVM9 353 aa19.75■□□□□ 0.75
HDDC3-206ENST00000561036 KLRF2D3W0D1 207 aa19.75■□□□□ 0.75
HDDC3-206ENST00000561036 MPHOSPH10O00566 681 aaKnown RBP19.75■□□□□ 0.75
HDDC3-206ENST00000561036 TBC1D12O60347 775 aa19.75■□□□□ 0.75
HDDC3-206ENST00000561036 SNHG28P0DPA3 235 aa19.75■□□□□ 0.75
HDDC3-206ENST00000561036 CCDC183Q5T5S1 534 aa19.75■□□□□ 0.75
HDDC3-206ENST00000561036 CLIP2Q9UDT6 1046 aa19.75■□□□□ 0.75
HDDC3-206ENST00000561036 KCNJ14Q9UNX9 436 aa19.75■□□□□ 0.75
HDDC3-206ENST00000561036 FSD2A1L4K1 749 aa19.74■□□□□ 0.75
HDDC3-206ENST00000561036 PDHBP11177 359 aa19.74■□□□□ 0.75
HDDC3-206ENST00000561036 CALML3P27482 149 aa19.74■□□□□ 0.75
HDDC3-206ENST00000561036 DEKP35659 375 aaKnown RBP19.74■□□□□ 0.75
HDDC3-206ENST00000561036 KRT2P35908 639 aa19.74■□□□□ 0.75
HDDC3-206ENST00000561036 TNNI2P48788 182 aa19.74■□□□□ 0.75
HDDC3-206ENST00000561036 ANO1Q5XXA6 986 aa19.74■□□□□ 0.75
HDDC3-206ENST00000561036 LINC00301Q8NCQ3 95 aa19.74■□□□□ 0.75
HDDC3-206ENST00000561036 VPS54Q9P1Q0 977 aa19.74■□□□□ 0.75
HDDC3-206ENST00000561036 SYNPO2Q9UMS6 1093 aa19.74■□□□□ 0.75
HDDC3-206ENST00000561036 BTBD18B2RXH4 712 aa19.73■□□□□ 0.75
HDDC3-206ENST00000561036 WNT10BO00744 389 aa19.73■□□□□ 0.75
HDDC3-206ENST00000561036 GMPSP49915 693 aaPredicted RBP19.73■□□□□ 0.75
HDDC3-206ENST00000561036 PRELPP51888 382 aa19.73■□□□□ 0.75
HDDC3-206ENST00000561036 STK38Q15208 465 aa19.73■□□□□ 0.75
HDDC3-206ENST00000561036 ABCB5Q2M3G0 1257 aa19.73■□□□□ 0.75
HDDC3-206ENST00000561036 RBM26Q5T8P6 1007 aaKnown RBP19.73■□□□□ 0.75
HDDC3-206ENST00000561036 GALNT17Q6IS24 598 aa19.73■□□□□ 0.75
HDDC3-206ENST00000561036 PGBD1Q96JS3 809 aa19.73■□□□□ 0.75
HDDC3-206ENST00000561036 GOLGA6L3A6NEY3 463 aa19.72■□□□□ 0.75
HDDC3-206ENST00000561036 USP17L5A8MUK1 530 aa19.72■□□□□ 0.75
HDDC3-206ENST00000561036 LMNB1P20700 586 aa19.72■□□□□ 0.75
HDDC3-206ENST00000561036 CEBPZQ03701 1054 aaKnown RBP19.72■□□□□ 0.75
HDDC3-206ENST00000561036 TNFAIP1Q13829 316 aa19.72■□□□□ 0.75
HDDC3-206ENST00000561036 SLC39A14Q15043 492 aa19.72■□□□□ 0.75
HDDC3-206ENST00000561036 RILPL1Q5EBL4 403 aa19.72■□□□□ 0.75
HDDC3-206ENST00000561036 GPATCH4Q5T3I0 446 aaKnown RBP19.72■□□□□ 0.75
HDDC3-206ENST00000561036 L1TD1Q5T7N2 865 aaKnown RBP19.72■□□□□ 0.75
HDDC3-206ENST00000561036 FHDC1Q9C0D6 1143 aaPredicted RBP19.72■□□□□ 0.75
HDDC3-206ENST00000561036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.72■□□□□ 0.75
HDDC3-206ENST00000561036 VEZTQ9HBM0 779 aa19.72■□□□□ 0.75
HDDC3-206ENST00000561036 CABP5Q9NP86 173 aa19.72■□□□□ 0.75
HDDC3-206ENST00000561036 CLIC4Q9Y696 253 aa19.72■□□□□ 0.75
HDDC3-206ENST00000561036 SPTLC2O15270 562 aa19.71■□□□□ 0.75
HDDC3-206ENST00000561036 CYTH3O43739 400 aa19.71■□□□□ 0.75
HDDC3-206ENST00000561036 MAP3K10Q02779 954 aa19.71■□□□□ 0.75
HDDC3-206ENST00000561036 SF3A1Q15459 793 aaKnown RBP19.71■□□□□ 0.75
HDDC3-206ENST00000561036 USP17L2Q6R6M4 530 aa19.71■□□□□ 0.75
HDDC3-206ENST00000561036 LRRC47Q8N1G4 583 aaKnown RBP19.71■□□□□ 0.75
HDDC3-206ENST00000561036 JMYQ8N9B5 988 aa19.71■□□□□ 0.75
HDDC3-206ENST00000561036 CCDC148Q8NFR7 591 aa19.71■□□□□ 0.75
HDDC3-206ENST00000561036 SHISA4Q96DD7 197 aa19.71■□□□□ 0.75
HDDC3-206ENST00000561036 RRP36Q96EU6 259 aaKnown RBP19.71■□□□□ 0.75
HDDC3-206ENST00000561036 FTOQ9C0B1 505 aaKnown RBP eCLIP19.71■□□□□ 0.75
HDDC3-206ENST00000561036 RIOX1Q9H6W3 641 aa19.71■□□□□ 0.75
HDDC3-206ENST00000561036 MORC2Q9Y6X9 1032 aaPredicted RBP19.71■□□□□ 0.75
HDDC3-206ENST00000561036 A0A1W2PQ27 194 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 A0A1W2PQ64 194 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 A0A1W2PQD8 194 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 hCG_1642624A0A1W2PR95 340 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 FAM196BA6NMK8 535 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 hCG_1984214I3L0E3 225 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 PPP6R2O75170 966 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 ME1P48163 572 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 NLRP5P59047 1200 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 ZNF543Q08ER8 600 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 SLC35G1Q2M3R5 365 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 NBPF9Q3BBW0 867 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 ADALQ6DHV7 355 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 ARHGAP27Q6ZUM4 889 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms