RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 SEMA3FQ13275 785 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 IQUBQ8NA54 791 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 CERKQ8TCT0 537 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 GOLGA6L9A6NEM1 432 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 UBAP1LF5GYI3 381 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 ZSCAN12O43309 604 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 ATP1A3P13637 1013 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 KCNQ4P56696 695 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 ST5P78524 1137 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 TFAP4Q01664 338 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 GRIN1Q05586 938 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 FAM47AQ5JRC9 791 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 SPECC1Q5M775 1068 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 DAGLBQ8NCG7 672 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 SYMPKQ92797 1274 aaKnown RBP11.76□□□□□ -0.53
RMDN3-209ENST00000560588 RPGRQ92834 1020 aaKnown RBP11.76□□□□□ -0.53
RMDN3-209ENST00000560588 SHISA4Q96DD7 197 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 PAGE5Q96GU1 130 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 RBM17Q96I25 401 aaKnown RBP11.76□□□□□ -0.53
RMDN3-209ENST00000560588 MKNK2Q9HBH9 465 aa11.76□□□□□ -0.53
RMDN3-209ENST00000560588 CYP2D6P10635 497 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 BMP6P22004 513 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 LONP1P36776 959 aaKnown RBP11.75□□□□□ -0.53
RMDN3-209ENST00000560588 TXLNAP40222 546 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 NFIXQ14938 502 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 NPY5RQ15761 445 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 ZNF444Q8N0Y2 327 aaPredicted RBP11.75□□□□□ -0.53
RMDN3-209ENST00000560588 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 DHX58Q96C10 678 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 CTAGE1Q96RT6 745 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 CCDC94Q9BW85 323 aaPredicted RBP11.75□□□□□ -0.53
RMDN3-209ENST00000560588 TMX1Q9H3N1 280 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 NFE2L3Q9Y4A8 694 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 FOXN1O15353 648 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 PRR29P0C7W0 189 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 TBX2Q13207 712 aaPredicted RBP11.75□□□□□ -0.53
RMDN3-209ENST00000560588 ZNF174Q15697 407 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 SPATA1Q5VX52 437 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 BLIDQ8IZY5 108 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 PNMA1Q8ND90 353 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 TBC1D22AQ8WUA7 517 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 PPP1R13BQ96KQ4 1090 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 RMND1Q9NWS8 449 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 PCDHA4Q9UN74 947 aa11.75□□□□□ -0.53
RMDN3-209ENST00000560588 USP27XA6NNY8 438 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 SMIM22K7EJ46 135 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 LAD1O00515 517 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 ARHGAP6O43182 974 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
RMDN3-209ENST00000560588 BBOX1O75936 387 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 PTGDRQ13258 359 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 E4F1Q66K89 784 aaPredicted RBP11.74□□□□□ -0.53
RMDN3-209ENST00000560588 SPECC1LQ69YQ0 1117 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 PTF1AQ7RTS3 328 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 TXNRD3Q86VQ6 643 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 PDCL2Q8N4E4 241 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 CCDC12Q8WUD4 166 aaPredicted RBP11.74□□□□□ -0.53
RMDN3-209ENST00000560588 FAM205CA6NFA0 338 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 USP17L8P0C7I0 530 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 TSPY3P0CV98 308 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 TSPY8P0CW00 308 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 IL1R1P14778 569 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 DPYDQ12882 1025 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 CRY2Q49AN0 593 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 EARS2Q5JPH6 523 aaKnown RBP11.74□□□□□ -0.53
RMDN3-209ENST00000560588 PDILTQ8N807 584 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 SH3RF3Q8TEJ3 882 aaPredicted RBP11.74□□□□□ -0.53
RMDN3-209ENST00000560588 ZNF592Q92610 1267 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 DPF2Q92785 391 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
RMDN3-209ENST00000560588 ERO1AQ96HE7 468 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 CGNQ9P2M7 1197 aaKnown RBP11.74□□□□□ -0.53
RMDN3-209ENST00000560588 GGA1Q9UJY5 639 aa11.74□□□□□ -0.53
RMDN3-209ENST00000560588 ONECUT3O60422 494 aaPredicted RBP11.73□□□□□ -0.53
RMDN3-209ENST00000560588 NMT2O60551 498 aa11.73□□□□□ -0.53
RMDN3-209ENST00000560588 MYL1P05976 194 aa11.73□□□□□ -0.53
RMDN3-209ENST00000560588 FILIP1LQ4L180 1135 aa11.73□□□□□ -0.53
RMDN3-209ENST00000560588 FAM196AQ6ZSG2 479 aa11.73□□□□□ -0.53
RMDN3-209ENST00000560588 PIK3AP1Q6ZUJ8 805 aa11.73□□□□□ -0.53
RMDN3-209ENST00000560588 GTPBP4Q9BZE4 634 aaKnown RBP11.73□□□□□ -0.53
RMDN3-209ENST00000560588 TRMT1Q9NXH9 659 aaKnown RBP11.73□□□□□ -0.53
RMDN3-209ENST00000560588 PODXL2Q9NZ53 605 aa11.73□□□□□ -0.53
RMDN3-209ENST00000560588 PHLPP2Q6ZVD8 1323 aa11.73□□□□□ -0.53
RMDN3-209ENST00000560588 GPR75-ASB3A0A0A6YYF3 556 aa11.72□□□□□ -0.53
RMDN3-209ENST00000560588 A0A1B0GTH6 734 aa11.72□□□□□ -0.53
RMDN3-209ENST00000560588 hCG_1642624A0A1W2PR95 340 aa11.72□□□□□ -0.53
RMDN3-209ENST00000560588 VWA3AA6NCI4 1184 aa11.72□□□□□ -0.53
RMDN3-209ENST00000560588 STX10O60499 249 aa11.72□□□□□ -0.53
RMDN3-209ENST00000560588 FMR1Q06787 632 aaKnown RBP eCLIP11.72□□□□□ -0.53
RMDN3-209ENST00000560588 SPAG1Q07617 926 aa11.72□□□□□ -0.53
RMDN3-209ENST00000560588 ORC2Q13416 577 aaPredicted RBP11.72□□□□□ -0.53
RMDN3-209ENST00000560588 SLC27A3Q5K4L6 730 aa11.72□□□□□ -0.53
RMDN3-209ENST00000560588 PRR5LQ6MZQ0 368 aa11.72□□□□□ -0.53
RMDN3-209ENST00000560588 USP49Q70CQ1 688 aa11.72□□□□□ -0.53
RMDN3-209ENST00000560588 EPSTI1Q96J88 318 aa11.72□□□□□ -0.53
RMDN3-209ENST00000560588 GJD4Q96KN9 370 aaPredicted RBP11.72□□□□□ -0.53
RMDN3-209ENST00000560588 SYNRGQ9UMZ2 1314 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms