RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 BCL11AQ9H165 835 aa22.71■■□□□ 1.23
CDC42BPB-206ENST00000559790 COL6A1P12109 1028 aa22.7■■□□□ 1.22
CDC42BPB-206ENST00000559790 ZKSCAN1P17029 563 aaPredicted RBP22.7■■□□□ 1.22
CDC42BPB-206ENST00000559790 RGS2P41220 211 aa22.7■■□□□ 1.22
CDC42BPB-206ENST00000559790 GRB14Q14449 540 aa22.7■■□□□ 1.22
CDC42BPB-206ENST00000559790 UBE3CQ15386 1083 aa22.7■■□□□ 1.22
CDC42BPB-206ENST00000559790 C12orf60Q5U649 245 aa22.7■■□□□ 1.22
CDC42BPB-206ENST00000559790 PUS7LQ9H0K6 701 aaKnown RBP22.7■■□□□ 1.22
CDC42BPB-206ENST00000559790 CABP5Q9NP86 173 aa22.7■■□□□ 1.22
CDC42BPB-206ENST00000559790 HOXC6P09630 235 aa22.69■■□□□ 1.22
CDC42BPB-206ENST00000559790 TMEM179Q6ZVK1 233 aa22.69■■□□□ 1.22
CDC42BPB-206ENST00000559790 NECAB2Q7Z6G3 386 aa22.69■■□□□ 1.22
CDC42BPB-206ENST00000559790 NPLOC4Q8TAT6 608 aa22.69■■□□□ 1.22
CDC42BPB-206ENST00000559790 LRRCC1Q9C099 1032 aa22.69■■□□□ 1.22
CDC42BPB-206ENST00000559790 EVI5O60447 810 aa22.68■■□□□ 1.22
CDC42BPB-206ENST00000559790 PTPREP23469 700 aa22.68■■□□□ 1.22
CDC42BPB-206ENST00000559790 C16orf86Q6ZW13 317 aa22.68■■□□□ 1.22
CDC42BPB-206ENST00000559790 ATP8A2Q9NTI2 1148 aa22.68■■□□□ 1.22
CDC42BPB-206ENST00000559790 SWAP70Q9UH65 585 aa22.68■■□□□ 1.22
CDC42BPB-206ENST00000559790 NR2E3Q9Y5X4 410 aa22.68■■□□□ 1.22
CDC42BPB-206ENST00000559790 ROBO3Q96MS0 1386 aa22.67■■□□□ 1.22
CDC42BPB-206ENST00000559790 SLC15A5A6NIM6 579 aa22.67■■□□□ 1.22
CDC42BPB-206ENST00000559790 USP17L12C9JPN9 530 aa22.67■■□□□ 1.22
CDC42BPB-206ENST00000559790 USP17L21D6R901 530 aa22.67■■□□□ 1.22
CDC42BPB-206ENST00000559790 TSHZ3Q63HK5 1081 aa22.67■■□□□ 1.22
CDC42BPB-206ENST00000559790 TRPV1Q8NER1 839 aa22.67■■□□□ 1.22
CDC42BPB-206ENST00000559790 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.67■■□□□ 1.22
CDC42BPB-206ENST00000559790 MOV10L1Q9BXT6 1211 aaKnown RBP22.67■■□□□ 1.22
CDC42BPB-206ENST00000559790 COL6A3P12111 3177 aa22.66■■□□□ 1.22
CDC42BPB-206ENST00000559790 MPHOSPH10O00566 681 aaKnown RBP22.66■■□□□ 1.22
CDC42BPB-206ENST00000559790 SOX1O00570 391 aaPredicted RBP22.66■■□□□ 1.22
CDC42BPB-206ENST00000559790 CDK8P49336 464 aa22.66■■□□□ 1.22
CDC42BPB-206ENST00000559790 CTR9Q6PD62 1173 aa22.66■■□□□ 1.22
CDC42BPB-206ENST00000559790 TRMT44Q8IYL2 757 aaKnown RBP22.66■■□□□ 1.22
CDC42BPB-206ENST00000559790 GDF15Q99988 308 aa22.66■■□□□ 1.22
CDC42BPB-206ENST00000559790 NBPF3Q9H094 633 aa22.66■■□□□ 1.22
CDC42BPB-206ENST00000559790 DCTPP1Q9H773 170 aa22.66■■□□□ 1.22
CDC42BPB-206ENST00000559790 TMX2Q9Y320 296 aa22.66■■□□□ 1.22
CDC42BPB-206ENST00000559790 LAMA2P24043 3122 aaKnown RBP22.65■■□□□ 1.22
CDC42BPB-206ENST00000559790 C7orf61Q8IZ16 206 aa22.65■■□□□ 1.22
CDC42BPB-206ENST00000559790 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.65■■□□□ 1.22
CDC42BPB-206ENST00000559790 C11orf49Q9H6J7 331 aa22.65■■□□□ 1.22
CDC42BPB-206ENST00000559790 CCNA1P78396 465 aa22.64■■□□□ 1.21
CDC42BPB-206ENST00000559790 ICA1Q05084 483 aa22.64■■□□□ 1.21
CDC42BPB-206ENST00000559790 SPICE1Q8N0Z3 855 aa22.64■■□□□ 1.21
CDC42BPB-206ENST00000559790 ATG4CQ96DT6 458 aa22.64■■□□□ 1.21
CDC42BPB-206ENST00000559790 CHMP4BQ9H444 224 aaKnown RBP22.64■■□□□ 1.21
CDC42BPB-206ENST00000559790 VCPKMTQ9H867 229 aa22.64■■□□□ 1.21
CDC42BPB-206ENST00000559790 EPB41L4AQ9HCS5 686 aaPredicted RBP22.64■■□□□ 1.21
CDC42BPB-206ENST00000559790 ECHDC1Q9NTX5 307 aa22.64■■□□□ 1.21
CDC42BPB-206ENST00000559790 LCTP09848 1927 aa22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 CYBAP13498 195 aa22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 DSG3P32926 999 aa22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 COG2Q14746 738 aa22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 OSBP2Q969R2 916 aa22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 STRBPQ96SI9 672 aaKnown RBP22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 TANGO6Q9C0B7 1094 aa22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 SPATC1LQ9H0A9 340 aa22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 STAP2Q9UGK3 403 aa22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 ZMYND8Q9ULU4 1186 aaPredicted RBP22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 SLC4A4Q9Y6R1 1079 aa22.63■■□□□ 1.21
CDC42BPB-206ENST00000559790 GSG1L2A8MUP6 293 aa22.62■■□□□ 1.21
CDC42BPB-206ENST00000559790 KBTBD3Q8NAB2 608 aa22.62■■□□□ 1.21
CDC42BPB-206ENST00000559790 LPAR1Q92633 364 aa22.62■■□□□ 1.21
CDC42BPB-206ENST00000559790 ADAMTS5Q9UNA0 930 aa22.62■■□□□ 1.21
CDC42BPB-206ENST00000559790 PCDHB15Q9Y5E8 787 aa22.62■■□□□ 1.21
CDC42BPB-206ENST00000559790 LRRC37A2A6NM11 1700 aa22.62■■□□□ 1.21
CDC42BPB-206ENST00000559790 COBLO75128 1261 aa22.61■■□□□ 1.21
CDC42BPB-206ENST00000559790 ADORA2AP29274 412 aa22.61■■□□□ 1.21
CDC42BPB-206ENST00000559790 CYP2C19P33261 490 aa22.61■■□□□ 1.21
CDC42BPB-206ENST00000559790 LRRC26Q2I0M4 334 aa22.61■■□□□ 1.21
CDC42BPB-206ENST00000559790 WDR78Q5VTH9 848 aa22.61■■□□□ 1.21
CDC42BPB-206ENST00000559790 SHCBP1Q8NEM2 672 aa22.61■■□□□ 1.21
CDC42BPB-206ENST00000559790 OTUD7AQ8TE49 926 aaPredicted RBP22.61■■□□□ 1.21
CDC42BPB-206ENST00000559790 CCDC17Q96LX7 622 aa22.61■■□□□ 1.21
CDC42BPB-206ENST00000559790 FBXO28Q9NVF7 368 aa22.61■■□□□ 1.21
CDC42BPB-206ENST00000559790 A0A1W2PPC1 479 aa22.6■■□□□ 1.21
CDC42BPB-206ENST00000559790 EEF2P13639 858 aaKnown RBP22.6■■□□□ 1.21
CDC42BPB-206ENST00000559790 ERCC3P19447 782 aa22.6■■□□□ 1.21
CDC42BPB-206ENST00000559790 RASA1P20936 1047 aa22.6■■□□□ 1.21
CDC42BPB-206ENST00000559790 CCAR1Q8IX12 1150 aaKnown RBP22.6■■□□□ 1.21
CDC42BPB-206ENST00000559790 REPS2Q8NFH8 660 aa22.6■■□□□ 1.21
CDC42BPB-206ENST00000559790 SALL3Q9BXA9 1300 aa22.59■■□□□ 1.21
CDC42BPB-206ENST00000559790 M0R2C6 588 aa22.59■■□□□ 1.21
CDC42BPB-206ENST00000559790 WDR46O15213 610 aaKnown RBP22.59■■□□□ 1.21
CDC42BPB-206ENST00000559790 SYN1P17600 705 aa22.59■■□□□ 1.21
CDC42BPB-206ENST00000559790 TMEM132BQ14DG7 1078 aa22.59■■□□□ 1.21
CDC42BPB-206ENST00000559790 SBK1Q52WX2 424 aa22.59■■□□□ 1.21
CDC42BPB-206ENST00000559790 ARHGEF10LQ9HCE6 1279 aa22.59■■□□□ 1.21
CDC42BPB-206ENST00000559790 FLOT1O75955 427 aa22.58■■□□□ 1.21
CDC42BPB-206ENST00000559790 GLRX3O76003 335 aaKnown RBP22.58■■□□□ 1.21
CDC42BPB-206ENST00000559790 OLFML2BQ68BL8 750 aa22.58■■□□□ 1.21
CDC42BPB-206ENST00000559790 PI4K2BQ8TCG2 481 aa22.58■■□□□ 1.21
CDC42BPB-206ENST00000559790 APPBP2Q92624 585 aa22.58■■□□□ 1.21
CDC42BPB-206ENST00000559790 LRCH3Q96II8 777 aa22.58■■□□□ 1.21
CDC42BPB-206ENST00000559790 HOXC10Q9NYD6 342 aa22.58■■□□□ 1.21
CDC42BPB-206ENST00000559790 ARPP21Q9UBL0 812 aaPredicted RBP22.58■■□□□ 1.21
CDC42BPB-206ENST00000559790 DDX20Q9UHI6 824 aaKnown RBP22.58■■□□□ 1.21
CDC42BPB-206ENST00000559790 IVNS1ABPQ9Y6Y0 642 aa22.58■■□□□ 1.21
CDC42BPB-206ENST00000559790 IGKV6D-41A0A0C4DH26 115 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms