RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 CHGBP05060 677 aa13.48□□□□□ -0.25
HERC1-204ENST00000559715 CYBAP13498 195 aa13.48□□□□□ -0.25
HERC1-204ENST00000559715 CYP2C19P33261 490 aa13.48□□□□□ -0.25
HERC1-204ENST00000559715 SLC17A8Q8NDX2 589 aa13.48□□□□□ -0.25
HERC1-204ENST00000559715 SDR42E1Q8WUS8 393 aa13.48□□□□□ -0.25
HERC1-204ENST00000559715 MOV10L1Q9BXT6 1211 aaKnown RBP13.48□□□□□ -0.25
HERC1-204ENST00000559715 GREB1LQ9C091 1923 aaPredicted RBP13.48□□□□□ -0.25
HERC1-204ENST00000559715 REV3LO60673 3130 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 TTC28Q96AY4 2481 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 PLXNA1Q9UIW2 1896 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 MAGEB6P1A0A0J9YX57 407 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 POTEB2H3BUK9 544 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 COBLO75128 1261 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 SLC9C2Q5TAH2 1124 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 CLEC10AQ8IUN9 316 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 FTSJ3Q8IY81 847 aaKnown RBP13.47□□□□□ -0.25
HERC1-204ENST00000559715 LCORLQ8N3X6 602 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 DEFB123Q8N688 67 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.47□□□□□ -0.25
HERC1-204ENST00000559715 LPAR1Q92633 364 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 FEZ1Q99689 392 aa13.47□□□□□ -0.25
HERC1-204ENST00000559715 DDX20Q9UHI6 824 aaKnown RBP13.47□□□□□ -0.25
HERC1-204ENST00000559715 CHD7Q9P2D1 2997 aa13.46□□□□□ -0.25
HERC1-204ENST00000559715 PRKAB2O43741 272 aa13.46□□□□□ -0.25
HERC1-204ENST00000559715 CCNA1P78396 465 aa13.46□□□□□ -0.25
HERC1-204ENST00000559715 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.25
HERC1-204ENST00000559715 COG2Q14746 738 aa13.46□□□□□ -0.25
HERC1-204ENST00000559715 DIEXFQ68CQ4 756 aaKnown RBP13.46□□□□□ -0.25
HERC1-204ENST00000559715 ERC1Q8IUD2 1116 aa13.46□□□□□ -0.25
HERC1-204ENST00000559715 DYNLL2Q96FJ2 89 aa13.46□□□□□ -0.25
HERC1-204ENST00000559715 UBE2OQ9C0C9 1292 aaKnown RBP13.46□□□□□ -0.25
HERC1-204ENST00000559715 SENP6Q9GZR1 1112 aaPredicted RBP13.46□□□□□ -0.25
HERC1-204ENST00000559715 ZBTB40Q9NUA8 1239 aa13.46□□□□□ -0.25
HERC1-204ENST00000559715 DLL1O00548 723 aa13.45□□□□□ -0.26
HERC1-204ENST00000559715 ADORA2AP29274 412 aa13.45□□□□□ -0.26
HERC1-204ENST00000559715 MDM2Q00987 491 aaPredicted RBP13.45□□□□□ -0.26
HERC1-204ENST00000559715 OLFML2BQ68BL8 750 aa13.45□□□□□ -0.26
HERC1-204ENST00000559715 CCAR1Q8IX12 1150 aaKnown RBP13.45□□□□□ -0.26
HERC1-204ENST00000559715 MIER1Q8N108 512 aa13.45□□□□□ -0.26
HERC1-204ENST00000559715 SPATC1LQ9H0A9 340 aa13.45□□□□□ -0.26
HERC1-204ENST00000559715 CABP5Q9NP86 173 aa13.45□□□□□ -0.26
HERC1-204ENST00000559715 MCM9Q9NXL9 1143 aa13.45□□□□□ -0.26
HERC1-204ENST00000559715 ADAMTS5Q9UNA0 930 aa13.45□□□□□ -0.26
HERC1-204ENST00000559715 STXBP5LQ9Y2K9 1186 aa13.45□□□□□ -0.26
HERC1-204ENST00000559715 CYP2D7A0A087X1C5 515 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 DNM1LO00429 736 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 GOLIM4O00461 696 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 STRNO43815 780 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 GLRX3O76003 335 aaKnown RBP13.44□□□□□ -0.26
HERC1-204ENST00000559715 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
HERC1-204ENST00000559715 POLR3DP05423 398 aaPredicted RBP13.44□□□□□ -0.26
HERC1-204ENST00000559715 AKR1B1P15121 316 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 ERCC3P19447 782 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 DSG3P32926 999 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 ATP2B2Q01814 1243 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 TTF1Q15361 905 aaPredicted RBP13.44□□□□□ -0.26
HERC1-204ENST00000559715 MFSD14CQ5VZR4 134 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 SHCBP1Q8NEM2 672 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 CRNKL1Q9BZJ0 848 aaKnown RBP13.44□□□□□ -0.26
HERC1-204ENST00000559715 ARMT1Q9H993 441 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 HOXC10Q9NYD6 342 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 TMX2Q9Y320 296 aa13.44□□□□□ -0.26
HERC1-204ENST00000559715 ZBED9Q6R2W3 1325 aa13.43□□□□□ -0.26
HERC1-204ENST00000559715 ADD2P35612 726 aa13.43□□□□□ -0.26
HERC1-204ENST00000559715 SNX17Q15036 470 aa13.43□□□□□ -0.26
HERC1-204ENST00000559715 PRAMEF19Q5SWL8 479 aa13.43□□□□□ -0.26
HERC1-204ENST00000559715 C12orf60Q5U649 245 aa13.43□□□□□ -0.26
HERC1-204ENST00000559715 WDR78Q5VTH9 848 aa13.43□□□□□ -0.26
HERC1-204ENST00000559715 TMEM179Q6ZVK1 233 aa13.43□□□□□ -0.26
HERC1-204ENST00000559715 GUCD1Q96NT3 240 aa13.43□□□□□ -0.26
HERC1-204ENST00000559715 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.43□□□□□ -0.26
HERC1-204ENST00000559715 TRANK1O15050 2925 aa13.42□□□□□ -0.26
HERC1-204ENST00000559715 MSCO60682 206 aa13.42□□□□□ -0.26
HERC1-204ENST00000559715 ATP5JP18859 108 aa13.42□□□□□ -0.26
HERC1-204ENST00000559715 ATN1P54259 1190 aaPredicted RBP13.42□□□□□ -0.26
HERC1-204ENST00000559715 TMEM132BQ14DG7 1078 aa13.42□□□□□ -0.26
HERC1-204ENST00000559715 GJC2Q5T442 439 aaPredicted RBP13.42□□□□□ -0.26
HERC1-204ENST00000559715 FAM109BQ6ICB4 259 aaPredicted RBP13.42□□□□□ -0.26
HERC1-204ENST00000559715 RPAP2Q8IXW5 612 aaPredicted RBP13.42□□□□□ -0.26
HERC1-204ENST00000559715 REPS2Q8NFH8 660 aa13.42□□□□□ -0.26
HERC1-204ENST00000559715 ATG4CQ96DT6 458 aa13.42□□□□□ -0.26
HERC1-204ENST00000559715 KIF1BPQ96EK5 621 aa13.42□□□□□ -0.26
HERC1-204ENST00000559715 VCPKMTQ9H867 229 aa13.42□□□□□ -0.26
HERC1-204ENST00000559715 IVNS1ABPQ9Y6Y0 642 aa13.42□□□□□ -0.26
HERC1-204ENST00000559715 MPHOSPH10O00566 681 aaKnown RBP13.41□□□□□ -0.26
HERC1-204ENST00000559715 SEPT4O43236 478 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 CDK8P49336 464 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 RTP1P59025 263 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 HSP90AB4PQ58FF6 505 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 ANO1Q5XXA6 986 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 SLC39A5Q6ZMH5 540 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 ABRAQ8N0Z2 381 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 SPICE1Q8N0Z3 855 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 CLASRPQ8N2M8 674 aaKnown RBP13.41□□□□□ -0.26
HERC1-204ENST00000559715 MAML3Q96JK9 1138 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 DNAJC2Q99543 621 aaKnown RBP13.41□□□□□ -0.26
HERC1-204ENST00000559715 ATP8A2Q9NTI2 1148 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 FBXO28Q9NVF7 368 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 PAG1Q9NWQ8 432 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms