RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 NACAP1Q9BZK3 213 aa19.97■□□□□ 0.79
NEDD4-212ENST00000557845 RNF208Q9H0X6 261 aa19.97■□□□□ 0.79
NEDD4-212ENST00000557845 SH2D4AQ9H788 454 aa19.97■□□□□ 0.79
NEDD4-212ENST00000557845 GJB1P08034 283 aa19.96■□□□□ 0.79
NEDD4-212ENST00000557845 RASA1P20936 1047 aa19.96■□□□□ 0.79
NEDD4-212ENST00000557845 CHD1LQ86WJ1 897 aa19.96■□□□□ 0.79
NEDD4-212ENST00000557845 LPAR1Q92633 364 aa19.96■□□□□ 0.79
NEDD4-212ENST00000557845 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.96■□□□□ 0.79
NEDD4-212ENST00000557845 PORCNQ9H237 461 aa19.96■□□□□ 0.79
NEDD4-212ENST00000557845 VCPKMTQ9H867 229 aa19.96■□□□□ 0.79
NEDD4-212ENST00000557845 HOXC10Q9NYD6 342 aa19.96■□□□□ 0.79
NEDD4-212ENST00000557845 ROBO3Q96MS0 1386 aa19.95■□□□□ 0.79
NEDD4-212ENST00000557845 SPDYE16A6NNV3 312 aaPredicted RBP19.95■□□□□ 0.78
NEDD4-212ENST00000557845 INHAP05111 366 aa19.95■□□□□ 0.78
NEDD4-212ENST00000557845 CCNA1P78396 465 aa19.95■□□□□ 0.78
NEDD4-212ENST00000557845 NUCB1Q02818 461 aa19.95■□□□□ 0.78
NEDD4-212ENST00000557845 NKX2-3Q8TAU0 364 aa19.95■□□□□ 0.78
NEDD4-212ENST00000557845 NUDT12Q9BQG2 462 aa19.95■□□□□ 0.78
NEDD4-212ENST00000557845 TANGO6Q9C0B7 1094 aa19.95■□□□□ 0.78
NEDD4-212ENST00000557845 UNC93B1Q9H1C4 597 aa19.95■□□□□ 0.78
NEDD4-212ENST00000557845 BTBD7Q9P203 1132 aa19.95■□□□□ 0.78
NEDD4-212ENST00000557845 CYP2B6P20813 491 aa19.94■□□□□ 0.78
NEDD4-212ENST00000557845 GJA8P48165 433 aa19.94■□□□□ 0.78
NEDD4-212ENST00000557845 ATP2B2Q01814 1243 aa19.94■□□□□ 0.78
NEDD4-212ENST00000557845 CCDC129Q6ZRS4 1044 aa19.94■□□□□ 0.78
NEDD4-212ENST00000557845 GPR142Q7Z601 462 aa19.94■□□□□ 0.78
NEDD4-212ENST00000557845 PLEKHH3Q7Z736 793 aa19.94■□□□□ 0.78
NEDD4-212ENST00000557845 ZNF444Q8N0Y2 327 aaPredicted RBP19.94■□□□□ 0.78
NEDD4-212ENST00000557845 SPICE1Q8N0Z3 855 aa19.94■□□□□ 0.78
NEDD4-212ENST00000557845 NAPBQ9H115 298 aa19.94■□□□□ 0.78
NEDD4-212ENST00000557845 ZNF287Q9HBT7 754 aa19.94■□□□□ 0.78
NEDD4-212ENST00000557845 RLFQ13129 1914 aa19.94■□□□□ 0.78
NEDD4-212ENST00000557845 GREB1LQ9C091 1923 aaPredicted RBP19.94■□□□□ 0.78
NEDD4-212ENST00000557845 TICAM2Q86XR7 235 aa19.93■□□□□ 0.78
NEDD4-212ENST00000557845 PLEKHM2Q8IWE5 1019 aa19.93■□□□□ 0.78
NEDD4-212ENST00000557845 SOCS4Q8WXH5 440 aa19.93■□□□□ 0.78
NEDD4-212ENST00000557845 HELLSQ9NRZ9 838 aa19.93■□□□□ 0.78
NEDD4-212ENST00000557845 TRIM6-TRIM34B2RNG4 842 aa19.92■□□□□ 0.78
NEDD4-212ENST00000557845 WDR46O15213 610 aaKnown RBP19.92■□□□□ 0.78
NEDD4-212ENST00000557845 PRDM1O75626 825 aa19.92■□□□□ 0.78
NEDD4-212ENST00000557845 XRCC5P13010 732 aaKnown RBP19.92■□□□□ 0.78
NEDD4-212ENST00000557845 DSG3P32926 999 aa19.92■□□□□ 0.78
NEDD4-212ENST00000557845 MORN1Q5T089 497 aa19.92■□□□□ 0.78
NEDD4-212ENST00000557845 USP6NLQ92738 828 aa19.92■□□□□ 0.78
NEDD4-212ENST00000557845 SHISA4Q96DD7 197 aa19.92■□□□□ 0.78
NEDD4-212ENST00000557845 OSBPL3Q9H4L5 887 aa19.92■□□□□ 0.78
NEDD4-212ENST00000557845 GOPCQ9HD26 462 aa19.92■□□□□ 0.78
NEDD4-212ENST00000557845 NYAP2Q9P242 653 aa19.92■□□□□ 0.78
NEDD4-212ENST00000557845 FOXP2O15409 715 aa19.91■□□□□ 0.78
NEDD4-212ENST00000557845 FLOT1O75955 427 aa19.91■□□□□ 0.78
NEDD4-212ENST00000557845 SGPL1O95470 568 aa19.91■□□□□ 0.78
NEDD4-212ENST00000557845 HMGCRP04035 888 aa19.91■□□□□ 0.78
NEDD4-212ENST00000557845 PPARAQ07869 468 aa19.91■□□□□ 0.78
NEDD4-212ENST00000557845 U2AF1L4Q8WU68 220 aaKnown RBP19.91■□□□□ 0.78
NEDD4-212ENST00000557845 RILPL2Q969X0 211 aa19.91■□□□□ 0.78
NEDD4-212ENST00000557845 CWC22Q9HCG8 908 aaKnown RBP19.91■□□□□ 0.78
NEDD4-212ENST00000557845 MKI67P46013 3256 aaKnown RBP19.91■□□□□ 0.78
NEDD4-212ENST00000557845 IGKV6D-41A0A0C4DH26 115 aa19.9■□□□□ 0.78
NEDD4-212ENST00000557845 SLC3A2P08195 630 aaKnown RBP19.9■□□□□ 0.78
NEDD4-212ENST00000557845 PDE4BQ07343 736 aa19.9■□□□□ 0.78
NEDD4-212ENST00000557845 MCMDC2Q4G0Z9 681 aa19.9■□□□□ 0.78
NEDD4-212ENST00000557845 TRIB2Q92519 343 aa19.9■□□□□ 0.78
NEDD4-212ENST00000557845 FAM227BQ96M60 508 aa19.9■□□□□ 0.78
NEDD4-212ENST00000557845 PAK6Q9NQU5 681 aaPredicted RBP19.9■□□□□ 0.78
NEDD4-212ENST00000557845 PARP14Q460N5 1801 aa19.9■□□□□ 0.78
NEDD4-212ENST00000557845 RAD21O60216 631 aa19.89■□□□□ 0.77
NEDD4-212ENST00000557845 PTPREP23469 700 aa19.89■□□□□ 0.77
NEDD4-212ENST00000557845 RGS2P41220 211 aa19.89■□□□□ 0.77
NEDD4-212ENST00000557845 IRX6P78412 446 aaPredicted RBP19.89■□□□□ 0.77
NEDD4-212ENST00000557845 TRIM32Q13049 653 aa19.89■□□□□ 0.77
NEDD4-212ENST00000557845 VPS53Q5VIR6 699 aa19.89■□□□□ 0.77
NEDD4-212ENST00000557845 WDR78Q5VTH9 848 aa19.89■□□□□ 0.77
NEDD4-212ENST00000557845 PRPF38BQ5VTL8 546 aaKnown RBP19.89■□□□□ 0.77
NEDD4-212ENST00000557845 TRMT44Q8IYL2 757 aaKnown RBP19.89■□□□□ 0.77
NEDD4-212ENST00000557845 MB21D1Q8N884 522 aa19.89■□□□□ 0.77
NEDD4-212ENST00000557845 DEFB118Q96PH6 123 aa19.89■□□□□ 0.77
NEDD4-212ENST00000557845 CLIP2Q9UDT6 1046 aa19.89■□□□□ 0.77
NEDD4-212ENST00000557845 MYH4Q9Y623 1939 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 RPTORQ8N122 1335 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 A0A0D9SFI3 127 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 SLC15A5A6NIM6 579 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 F5H6K3 240 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 KLRC3Q07444 240 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 MAP2K5Q13163 448 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 NEDD1Q8NHV4 660 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 MKL1Q969V6 931 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 ATG4CQ96DT6 458 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 MOV10L1Q9BXT6 1211 aaKnown RBP19.88■□□□□ 0.77
NEDD4-212ENST00000557845 SPATC1LQ9H0A9 340 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.88■□□□□ 0.77
NEDD4-212ENST00000557845 HMX1Q9NP08 348 aaPredicted RBP19.88■□□□□ 0.77
NEDD4-212ENST00000557845 ADAMTS5Q9UNA0 930 aa19.88■□□□□ 0.77
NEDD4-212ENST00000557845 TFRCP02786 760 aaKnown RBP19.87■□□□□ 0.77
NEDD4-212ENST00000557845 TSPY3P0CV98 308 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 TSPY8P0CW00 308 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 CAPN2P17655 700 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 TFAP4Q01664 338 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 CTDSPL2Q05D32 466 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 NMIQ13287 307 aaPredicted RBP19.87■□□□□ 0.77
NEDD4-212ENST00000557845 ALX1Q15699 326 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms