RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 MYH13Q9UKX3 1938 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 TRIM75PA6NK02 468 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 CCND3P30281 292 aaPredicted RBP8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 CASP7P55210 303 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 PABPC4Q13310 644 aaKnown RBP eCLIP8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 PDE3AQ14432 1141 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 QPCTQ16769 361 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 TAF7LQ5H9L4 462 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 MORN1Q5T089 497 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 AKNAD1Q5T1N1 836 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 TREML2Q5T2D2 321 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 LDHAL6AQ6ZMR3 332 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 BADQ92934 168 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 RNPC3Q96LT9 517 aaKnown RBP8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 ZNF576Q9H609 170 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 PCDHGC3Q9UN70 934 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 ATP11BQ9Y2G3 1177 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 SUGT1Q9Y2Z0 365 aa8.53□□□□□ -1.04
SPTLC2-206ENST00000557566 PHF20L1A8MW92 1017 aa8.52□□□□□ -1.05
SPTLC2-206ENST00000557566 TMEM31Q5JXX7 168 aa8.52□□□□□ -1.05
SPTLC2-206ENST00000557566 SCUBE3Q8IX30 993 aa8.52□□□□□ -1.05
SPTLC2-206ENST00000557566 IQSEC3Q9UPP2 1182 aaPredicted RBP8.52□□□□□ -1.05
SPTLC2-206ENST00000557566 LRRFIP2Q9Y608 721 aaKnown RBP8.52□□□□□ -1.05
SPTLC2-206ENST00000557566 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 DNM1LO00429 736 aa8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 GFRA3O60609 400 aa8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 MSCO60682 206 aa8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 CTNND1O60716 968 aaKnown RBP8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 RGS2P41220 211 aa8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 NFIAQ12857 509 aa8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 CCDC57Q2TAC2 916 aa8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 Q3C1V9 767 aa8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 CAVIN4Q5BKX8 364 aa8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 CCDC146Q8IYE0 955 aa8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 NECAB3Q96P71 396 aaPredicted RBP8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 MORF4L1Q9UBU8 362 aa8.51□□□□□ -1.05
SPTLC2-206ENST00000557566 ATRNL1Q5VV63 1379 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 CHD7Q9P2D1 2997 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 A6NJR5 290 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 FOXO4P98177 505 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 CDC42EP5Q6NZY7 148 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 FBXO33Q7Z6M2 555 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 CCAR1Q8IX12 1150 aaKnown RBP8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 LPAR1Q92633 364 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 TIFAQ96CG3 184 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 ZNF594Q96JF6 807 aaPredicted RBP8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 P2RX7Q99572 595 aaKnown RBP8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 APBA2Q99767 749 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 STK31Q9BXU1 1019 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 ASCC2Q9H1I8 757 aaPredicted RBP8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 PDLIM7Q9NR12 457 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 DDX20Q9UHI6 824 aaKnown RBP8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 ATAD5Q96QE3 1844 aa8.5□□□□□ -1.05
SPTLC2-206ENST00000557566 PLXNA1Q9UIW2 1896 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 ZNF853P0CG23 659 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 MAPK4P31152 587 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 GNAI1P63096 354 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 MTMR2Q13614 643 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 CCDC85BQ15834 202 aaPredicted RBP8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 CCL14Q16627 93 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 AAK1Q2M2I8 961 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 SLC39A5Q6ZMH5 540 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 RNF19BQ6ZMZ0 732 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 C8orf58Q8NAV2 365 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 LINS1Q8NG48 757 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 RUNDC1Q96C34 613 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 SPSB2Q99619 263 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 EPHX3Q9H6B9 360 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 IFT57Q9NWB7 429 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 CXXC1Q9P0U4 656 aaPredicted RBP8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 NOP58Q9Y2X3 529 aaKnown RBP8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 DAGLAQ9Y4D2 1042 aa8.49□□□□□ -1.05
SPTLC2-206ENST00000557566 TRANK1O15050 2925 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 WDFY4Q6ZS81 3184 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 KBTBD13C9JR72 458 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 BMP1P13497 986 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 CNGA1P29973 690 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 MRE11P49959 708 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 HMGCS2P54868 508 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 IRX3P78415 501 aaPredicted RBP8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 MAP3K10Q02779 954 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 CALD1Q05682 793 aaKnown RBP8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 SNX17Q15036 470 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 TRIM60Q495X7 471 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 MFSD14CQ5VZR4 134 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 LMBR1LQ6UX01 489 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 CCDC84Q86UT8 332 aaPredicted RBP8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 ZSCAN29Q8IWY8 852 aaPredicted RBP8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 ARRDC4Q8NCT1 418 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 GPRC5AQ8NFJ5 357 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 USP6NLQ92738 828 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 PRDM12Q9H4Q4 367 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 PRKRIP1Q9H875 184 aaPredicted RBP8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 USP40Q9NVE5 1235 aa8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 SALL2Q9Y467 1007 aaPredicted RBP8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 MYBBP1AQ9BQG0 1328 aaKnown RBP8.48□□□□□ -1.05
SPTLC2-206ENST00000557566 CACNA1FO60840 1977 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms