RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 IL1R1P14778 569 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 TDO2P48775 406 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 KRT85P78386 507 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 GSTO1P78417 241 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 GPSM2P81274 684 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 PPARAQ07869 468 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 ZNF827Q17R98 1081 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 CYB5R4Q7L1T6 521 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 CDC37L1Q7L3B6 337 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 CHST3Q7LGC8 479 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 SH3RF1Q7Z6J0 888 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 TXNRD3Q86VQ6 643 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 COL23A1Q86Y22 540 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-235ENST00000556082 CHAMP1Q96JM3 812 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 SCAND2PQ9GZW5 306 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-235ENST00000556082 ATP8A2Q9NTI2 1148 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 ZSWIM5Q9P217 1185 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 CNPY2Q9Y2B0 182 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 MAP4K5Q9Y4K4 846 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 TNRC6CQ9HCJ0 1690 aaKnown RBP9.7□□□□□ -0.86
ATXN3-235ENST00000556082 B4E1Z4 1266 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 CDKL5O76039 1030 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 LETM1O95202 739 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-235ENST00000556082 LDHCP07864 332 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 XRCC6P12956 609 aaKnown RBP eCLIP9.69□□□□□ -0.86
ATXN3-235ENST00000556082 FDPSP14324 419 aaKnown RBP9.69□□□□□ -0.86
ATXN3-235ENST00000556082 NPR1P16066 1061 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 GRM5P41594 1212 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 CCT2P78371 535 aaKnown RBP9.69□□□□□ -0.86
ATXN3-235ENST00000556082 DNM1Q05193 864 aaKnown RBP9.69□□□□□ -0.86
ATXN3-235ENST00000556082 RESTQ13127 1097 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 NID2Q14112 1375 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 PPP2R5BQ15173 497 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
ATXN3-235ENST00000556082 ZSCAN23Q3MJ62 389 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 SBK1Q52WX2 424 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 CAVIN1Q6NZI2 390 aaKnown RBP9.69□□□□□ -0.86
ATXN3-235ENST00000556082 TRMT44Q8IYL2 757 aaKnown RBP9.69□□□□□ -0.86
ATXN3-235ENST00000556082 MIGA1Q8NAN2 632 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 C1QTNF2Q9BXJ5 285 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 CRNKL1Q9BZJ0 848 aaKnown RBP9.69□□□□□ -0.86
ATXN3-235ENST00000556082 LY9Q9HBG7 655 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 GGA1Q9UJY5 639 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 CFAP45Q9UL16 551 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 ATP6V0A2Q9Y487 856 aa9.69□□□□□ -0.86
ATXN3-235ENST00000556082 TIAM2Q8IVF5 1701 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 NEDD4P46934 1319 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 FAM205AQ6ZU69 1335 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 GOLGA8BA8MQT2 603 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 H3BQV1 296 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 SRGNP10124 158 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 ALDH1B1P30837 517 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 PDE6BP35913 854 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 CTDSPL2Q05D32 466 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 ARID5BQ14865 1188 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 SART3Q15020 963 aaKnown RBP9.68□□□□□ -0.86
ATXN3-235ENST00000556082 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 TMEM67Q5HYA8 995 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 CPLX2Q6PUV4 134 aaKnown RBP9.68□□□□□ -0.86
ATXN3-235ENST00000556082 APOA5Q6Q788 366 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 GAS2L3Q86XJ1 694 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 TBC1D16Q8TBP0 767 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 ESR2Q92731 530 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 DDX11Q96FC9 970 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 GRPEL1Q9HAV7 217 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 NCOA5Q9HCD5 579 aaKnown RBP9.68□□□□□ -0.86
ATXN3-235ENST00000556082 CD209Q9NNX6 404 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
ATXN3-235ENST00000556082 SUGT1Q9Y2Z0 365 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 TACC3Q9Y6A5 838 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 CACNA1SQ13698 1873 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 LAMA4Q16363 1823 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 CASZ1Q86V15 1759 aa9.68□□□□□ -0.86
ATXN3-235ENST00000556082 CPLX1O14810 134 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 IFIT3O14879 490 aaKnown RBP9.67□□□□□ -0.86
ATXN3-235ENST00000556082 ZBTB43O43298 467 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 ORC4O43929 436 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 GADD45BO75293 160 aaPredicted RBP9.67□□□□□ -0.86
ATXN3-235ENST00000556082 UFL1O94874 794 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 BAG3O95817 575 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 LDHBP07195 334 aaKnown RBP9.67□□□□□ -0.86
ATXN3-235ENST00000556082 PRDX5P30044 214 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 ADD1P35611 737 aaKnown RBP9.67□□□□□ -0.86
ATXN3-235ENST00000556082 DYNLL1P63167 89 aaKnown RBP9.67□□□□□ -0.86
ATXN3-235ENST00000556082 CTR9Q6PD62 1173 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 FBXO18Q8NFZ0 1043 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 TBC1D22AQ8WUA7 517 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 IRF7Q92985 503 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 TMEM63CQ9P1W3 806 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 MKRN1Q9UHC7 482 aaKnown RBP9.67□□□□□ -0.86
ATXN3-235ENST00000556082 TAF1P21675 1872 aa9.67□□□□□ -0.86
ATXN3-235ENST00000556082 MYO5AQ9Y4I1 1855 aaKnown RBP9.67□□□□□ -0.86
ATXN3-235ENST00000556082 STK36Q9NRP7 1315 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 NRXN2Q9P2S2 1712 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 CCDC196A0A1B0GTZ2 297 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 ERICH2A1L162 156 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 SLC3A2P08195 630 aaKnown RBP9.66□□□□□ -0.86
ATXN3-235ENST00000556082 METAP2P50579 478 aaKnown RBP eCLIP9.66□□□□□ -0.86
ATXN3-235ENST00000556082 CHAF1AQ13111 956 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms