RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 GOLGA6L3A6NEY3 463 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 C19orf81C9J6K1 198 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 NMIQ13287 307 aaPredicted RBP4.66□□□□□ -1.66
LINC00648-202ENST00000555985 CENPQQ7L2Z9 268 aaPredicted RBP4.66□□□□□ -1.66
LINC00648-202ENST00000555985 ZSCAN29Q8IWY8 852 aaPredicted RBP4.66□□□□□ -1.66
LINC00648-202ENST00000555985 MKL1Q969V6 931 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 MCM9Q9NXL9 1143 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 ESPNB1AK53 854 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 ORC4O43929 436 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 FKTNO75072 461 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 GDF11O95390 407 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 GH2P01242 217 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 AKR1B1P15121 316 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 LRRFIP1Q32MZ4 808 aaKnown RBP4.66□□□□□ -1.66
LINC00648-202ENST00000555985 CERKLQ49MI3 558 aaPredicted RBP4.66□□□□□ -1.66
LINC00648-202ENST00000555985 MCMDC2Q4G0Z9 681 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 CCDC129Q6ZRS4 1044 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 TMEM179Q6ZVK1 233 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.66□□□□□ -1.66
LINC00648-202ENST00000555985 SKAP1Q86WV1 359 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 CCDC17Q96LX7 622 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 MCOLN1Q9GZU1 580 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 PICK1Q9NRD5 415 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 TMX2Q9Y320 296 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 CCDC171Q6TFL3 1326 aa4.66□□□□□ -1.66
LINC00648-202ENST00000555985 HSPD1P10809 573 aaKnown RBP4.65□□□□□ -1.66
LINC00648-202ENST00000555985 RGS19P49795 217 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 LACTBP83111 547 aaPredicted RBP4.65□□□□□ -1.66
LINC00648-202ENST00000555985 GRM1Q13255 1194 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 MTMR2Q13614 643 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 PKN2Q16513 984 aaKnown RBP4.65□□□□□ -1.66
LINC00648-202ENST00000555985 ABCB5Q2M3G0 1257 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 C8orf34Q49A92 452 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 USP17L2Q6R6M4 530 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 CTU1Q7Z7A3 348 aaKnown RBP4.65□□□□□ -1.66
LINC00648-202ENST00000555985 ZNF467Q7Z7K2 595 aaPredicted RBP4.65□□□□□ -1.66
LINC00648-202ENST00000555985 REPS2Q8NFH8 660 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 ACER1Q8TDN7 264 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 USP6NLQ92738 828 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 FSD1Q9BTV5 496 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 PANK2Q9BZ23 570 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 AS3MTQ9HBK9 375 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 ZFYVE28Q9HCC9 887 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 TCP11L1Q9NUJ3 509 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 RAD50Q92878 1312 aa4.65□□□□□ -1.66
LINC00648-202ENST00000555985 TRIM75PA6NK02 468 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 USP17L10C9JJH3 530 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 MAP3K13O43283 966 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 GNRH1P01148 92 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 FGAP02671 866 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 CHMLP26374 656 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 HMGCS2P54868 508 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 PPARAQ07869 468 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 SPP2Q13103 211 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 SEPT2Q15019 361 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 OTUD7BQ6GQQ9 843 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 CATSPERGQ6ZRH7 1159 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 OTOP1Q7RTM1 612 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 DSCC1Q9BVC3 393 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 ARHGAP39Q9C0H5 1083 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 ASCC2Q9H1I8 757 aaPredicted RBP4.65□□□□□ -1.67
LINC00648-202ENST00000555985 IL17RBQ9NRM6 502 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 NYAP2Q9P242 653 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 PLXNA1Q9UIW2 1896 aa4.65□□□□□ -1.67
LINC00648-202ENST00000555985 CYP2C8P10632 490 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 PYGBP11216 843 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 VCAM1P19320 739 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 NT5C2P49902 561 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 SP3Q02447 781 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 FAM110CQ1W6H9 321 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 SLC4A8Q2Y0W8 1093 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 GMCL1P1Q8NEA9 526 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 NEDD1Q8NHV4 660 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 STAG1Q8WVM7 1258 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 ANKS1AQ92625 1134 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 ARMC5Q96C12 935 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 TRIM47Q96LD4 638 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 PARK7Q99497 189 aaKnown RBP4.64□□□□□ -1.67
LINC00648-202ENST00000555985 BEGAINQ9BUH8 593 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 TXNRD2Q9NNW7 524 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 RBPJLQ9UBG7 517 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 GJD2Q9UKL4 321 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 PTPN22Q9Y2R2 807 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 MYPNQ86TC9 1320 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 HIP1O00291 1037 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 ECM2O94769 699 aaPredicted RBP4.64□□□□□ -1.67
LINC00648-202ENST00000555985 POLR3DP05423 398 aaPredicted RBP4.64□□□□□ -1.67
LINC00648-202ENST00000555985 PCP11498 1178 aaKnown RBP4.64□□□□□ -1.67
LINC00648-202ENST00000555985 USP14P54578 494 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 TAF1CQ15572 869 aaPredicted RBP4.64□□□□□ -1.67
LINC00648-202ENST00000555985 BMP2KLQ5H9B9 411 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 RCSD1Q6JBY9 416 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 FBXO46Q6PJ61 603 aaPredicted RBP4.64□□□□□ -1.67
LINC00648-202ENST00000555985 TBC1D10CQ8IV04 446 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 SMAP1Q8IYB5 467 aaPredicted RBP4.64□□□□□ -1.67
LINC00648-202ENST00000555985 CRACR2BQ8N4Y2 399 aaPredicted RBP4.64□□□□□ -1.67
LINC00648-202ENST00000555985 CD99L2Q8TCZ2 262 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 ERO1AQ96HE7 468 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 MAP7D2Q96T17 732 aa4.64□□□□□ -1.67
LINC00648-202ENST00000555985 MTMR4Q9NYA4 1195 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms