RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 ARMT1Q9H993 441 aa14.8□□□□□ -0.04
MTHFD1-207ENST00000554677 PFASO15067 1338 aa14.8□□□□□ -0.04
MTHFD1-207ENST00000554677 A0A1W2PPC1 479 aa14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 SLC15A5A6NIM6 579 aa14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 SOX1O00570 391 aaPredicted RBP14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 HMMRO75330 724 aa14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 COL6A1P12109 1028 aa14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 LAMA2P24043 3122 aaKnown RBP14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 C20orf194Q5TEA3 1177 aa14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 CCAR1Q8IX12 1150 aaKnown RBP14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 NPLOC4Q8TAT6 608 aa14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 HAUS7Q99871 368 aa14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 PAG1Q9NWQ8 432 aa14.79□□□□□ -0.04
MTHFD1-207ENST00000554677 COL11A1P12107 1806 aaPredicted RBP14.78□□□□□ -0.04
MTHFD1-207ENST00000554677 HOXC6P09630 235 aa14.78□□□□□ -0.04
MTHFD1-207ENST00000554677 BMP8BP34820 402 aa14.78□□□□□ -0.04
MTHFD1-207ENST00000554677 CCNA1P78396 465 aa14.78□□□□□ -0.04
MTHFD1-207ENST00000554677 GRB14Q14449 540 aa14.78□□□□□ -0.04
MTHFD1-207ENST00000554677 C7orf61Q8IZ16 206 aa14.78□□□□□ -0.04
MTHFD1-207ENST00000554677 BCL11AQ9H165 835 aa14.78□□□□□ -0.04
MTHFD1-207ENST00000554677 ZMYND8Q9ULU4 1186 aaPredicted RBP14.78□□□□□ -0.04
MTHFD1-207ENST00000554677 CYP2D7A0A087X1C5 515 aa14.77□□□□□ -0.05
MTHFD1-207ENST00000554677 MPHOSPH10O00566 681 aaKnown RBP14.77□□□□□ -0.05
MTHFD1-207ENST00000554677 MBD4O95243 580 aa14.77□□□□□ -0.05
MTHFD1-207ENST00000554677 AKR1B1P15121 316 aa14.77□□□□□ -0.05
MTHFD1-207ENST00000554677 COG2Q14746 738 aa14.77□□□□□ -0.05
MTHFD1-207ENST00000554677 ATP8A2Q9NTI2 1148 aa14.77□□□□□ -0.05
MTHFD1-207ENST00000554677 RCAN3Q9UKA8 241 aa14.77□□□□□ -0.05
MTHFD1-207ENST00000554677 A0A0G2JMZ2 1700 aa14.77□□□□□ -0.05
MTHFD1-207ENST00000554677 GLRX3O76003 335 aaKnown RBP14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 UBE3CQ15386 1083 aa14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 C12orf60Q5U649 245 aa14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 TMEM179Q6ZVK1 233 aa14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 CLEC10AQ8IUN9 316 aa14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 TRPV1Q8NER1 839 aa14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 LRCH3Q96II8 777 aa14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 MOV10L1Q9BXT6 1211 aaKnown RBP14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 HOXC10Q9NYD6 342 aa14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 SWAP70Q9UH65 585 aa14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 A0A0C4DFX4 3053 aa14.76□□□□□ -0.05
MTHFD1-207ENST00000554677 USP17L12C9JPN9 530 aa14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 USP17L21D6R901 530 aa14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 SMARCA5O60264 1052 aaPredicted RBP14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 SYN1P17600 705 aa14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 DSG3P32926 999 aa14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 CDK8P49336 464 aa14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 LRRC26Q2I0M4 334 aa14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 WDR78Q5VTH9 848 aa14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 PUS7LQ9H0K6 701 aaKnown RBP14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 TMX2Q9Y320 296 aa14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 ZNF236Q9UL36 1845 aa14.75□□□□□ -0.05
MTHFD1-207ENST00000554677 COBLO75128 1261 aa14.74□□□□□ -0.05
MTHFD1-207ENST00000554677 CYP2C19P33261 490 aa14.74□□□□□ -0.05
MTHFD1-207ENST00000554677 MAGEA10P43363 369 aaPredicted RBP14.74□□□□□ -0.05
MTHFD1-207ENST00000554677 ATP2B2Q01814 1243 aa14.74□□□□□ -0.05
MTHFD1-207ENST00000554677 MFSD14CQ5VZR4 134 aa14.74□□□□□ -0.05
MTHFD1-207ENST00000554677 C16orf86Q6ZW13 317 aa14.74□□□□□ -0.05
MTHFD1-207ENST00000554677 SPATC1LQ9H0A9 340 aa14.74□□□□□ -0.05
MTHFD1-207ENST00000554677 CWC22Q9HCG8 908 aaKnown RBP14.74□□□□□ -0.05
MTHFD1-207ENST00000554677 GREB1LQ9C091 1923 aaPredicted RBP14.74□□□□□ -0.05
MTHFD1-207ENST00000554677 STRNO43815 780 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 ERCC3P19447 782 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 ADORA2AP29274 412 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 CTR9Q6PD62 1173 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 SPICE1Q8N0Z3 855 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 SHCBP1Q8NEM2 672 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 ATG4CQ96DT6 458 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 CCDC17Q96LX7 622 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 LRRCC1Q9C099 1032 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 TANGO6Q9C0B7 1094 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 CHMP4BQ9H444 224 aaKnown RBP14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 VCPKMTQ9H867 229 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 DDX20Q9UHI6 824 aaKnown RBP14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 ADAMTS5Q9UNA0 930 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 IVNS1ABPQ9Y6Y0 642 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 PLXNA1Q9UIW2 1896 aa14.73□□□□□ -0.05
MTHFD1-207ENST00000554677 CYBAP13498 195 aa14.72□□□□□ -0.05
MTHFD1-207ENST00000554677 ICA1Q05084 483 aa14.72□□□□□ -0.05
MTHFD1-207ENST00000554677 TPRNQ4KMQ1 711 aa14.72□□□□□ -0.05
MTHFD1-207ENST00000554677 OLFML2BQ68BL8 750 aa14.72□□□□□ -0.05
MTHFD1-207ENST00000554677 LPAR1Q92633 364 aa14.72□□□□□ -0.05
MTHFD1-207ENST00000554677 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.72□□□□□ -0.05
MTHFD1-207ENST00000554677 ARHGEF10LQ9HCE6 1279 aa14.72□□□□□ -0.05
MTHFD1-207ENST00000554677 SLC4A4Q9Y6R1 1079 aa14.72□□□□□ -0.05
MTHFD1-207ENST00000554677 EEF2P13639 858 aaKnown RBP14.71□□□□□ -0.05
MTHFD1-207ENST00000554677 TMEM132BQ14DG7 1078 aa14.71□□□□□ -0.05
MTHFD1-207ENST00000554677 DPP9Q86TI2 863 aa14.71□□□□□ -0.05
MTHFD1-207ENST00000554677 MB21D1Q8N884 522 aa14.71□□□□□ -0.05
MTHFD1-207ENST00000554677 STRBPQ96SI9 672 aaKnown RBP14.71□□□□□ -0.05
MTHFD1-207ENST00000554677 DCTPP1Q9H773 170 aa14.71□□□□□ -0.05
MTHFD1-207ENST00000554677 MYH4Q9Y623 1939 aa14.7□□□□□ -0.06
MTHFD1-207ENST00000554677 GSG1L2A8MUP6 293 aa14.7□□□□□ -0.06
MTHFD1-207ENST00000554677 WDR46O15213 610 aaKnown RBP14.7□□□□□ -0.06
MTHFD1-207ENST00000554677 MSCO60682 206 aa14.7□□□□□ -0.06
MTHFD1-207ENST00000554677 FLOT1O75955 427 aa14.7□□□□□ -0.06
MTHFD1-207ENST00000554677 CNGA1P29973 690 aa14.7□□□□□ -0.06
MTHFD1-207ENST00000554677 LRIT3Q3SXY7 679 aa14.7□□□□□ -0.06
MTHFD1-207ENST00000554677 ABRAQ8N0Z2 381 aa14.7□□□□□ -0.06
MTHFD1-207ENST00000554677 OSBP2Q969R2 916 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms