RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 CORO1BQ9BR76 489 aa8.57□□□□□ -1.04
ATXN3-223ENST00000553686 TRIM56Q9BRZ2 755 aaKnown RBP8.57□□□□□ -1.04
ATXN3-223ENST00000553686 SUGCTQ9HAC7 445 aa8.57□□□□□ -1.04
ATXN3-223ENST00000553686 ACEP12821 1306 aa8.56□□□□□ -1.04
ATXN3-223ENST00000553686 PIK3C2GO75747 1445 aa8.56□□□□□ -1.04
ATXN3-223ENST00000553686 ANKRD33BA6NCL7 494 aa8.56□□□□□ -1.04
ATXN3-223ENST00000553686 CTSBP07858 339 aa8.56□□□□□ -1.04
ATXN3-223ENST00000553686 BMP3P12645 472 aa8.56□□□□□ -1.04
ATXN3-223ENST00000553686 DRD2P14416 443 aa8.56□□□□□ -1.04
ATXN3-223ENST00000553686 SMC1BQ8NDV3 1235 aa8.56□□□□□ -1.04
ATXN3-223ENST00000553686 GZF1Q9H116 711 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-223ENST00000553686 PRDM10Q9NQV6 1147 aa8.56□□□□□ -1.04
ATXN3-223ENST00000553686 IGSF1Q8N6C5 1336 aa8.55□□□□□ -1.04
ATXN3-223ENST00000553686 GAS2O43903 313 aaKnown RBP8.55□□□□□ -1.04
ATXN3-223ENST00000553686 ECEL1O95672 775 aa8.55□□□□□ -1.04
ATXN3-223ENST00000553686 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
ATXN3-223ENST00000553686 ZMYM1Q5SVZ6 1142 aa8.55□□□□□ -1.04
ATXN3-223ENST00000553686 COL23A1Q86Y22 540 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-223ENST00000553686 FAM20CQ8IXL6 584 aa8.55□□□□□ -1.04
ATXN3-223ENST00000553686 OSBPL7Q9BZF2 842 aa8.55□□□□□ -1.04
ATXN3-223ENST00000553686 KCNF1Q9H3M0 494 aa8.55□□□□□ -1.04
ATXN3-223ENST00000553686 RAD18Q9NS91 495 aa8.55□□□□□ -1.04
ATXN3-223ENST00000553686 ALS2Q96Q42 1657 aa8.55□□□□□ -1.04
ATXN3-223ENST00000553686 KDM2BQ8NHM5 1336 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 PEAK1Q9H792 1746 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 CCDC7Q96M83 1385 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 GIPC1O14908 333 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 TIAF1O95411 115 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 FSTP19883 344 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 PPP2R3AQ06190 1150 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 SOX4Q06945 474 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-223ENST00000553686 AP3B2Q13367 1082 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 HP1BP3Q5SSJ5 553 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-223ENST00000553686 SLC51AQ86UW1 340 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 CLEC10AQ8IUN9 316 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 TRIM42Q8IWZ5 723 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 TMEM39AQ9NV64 488 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 GPN3Q9UHW5 284 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-223ENST00000553686 SPG7Q9UQ90 795 aa8.54□□□□□ -1.04
ATXN3-223ENST00000553686 TRPM3Q9HCF6 1732 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-223ENST00000553686 POLR3AO14802 1390 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-223ENST00000553686 USP11P51784 963 aa8.53□□□□□ -1.04
ATXN3-223ENST00000553686 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-223ENST00000553686 ARHGAP27Q6ZUM4 889 aa8.53□□□□□ -1.04
ATXN3-223ENST00000553686 FAM83CQ9BQN1 747 aa8.53□□□□□ -1.04
ATXN3-223ENST00000553686 SRCIN1Q9C0H9 1055 aa8.53□□□□□ -1.04
ATXN3-223ENST00000553686 PARP4Q9UKK3 1724 aaKnown RBP8.53□□□□□ -1.04
ATXN3-223ENST00000553686 TULP4Q9NRJ4 1543 aa8.53□□□□□ -1.04
ATXN3-223ENST00000553686 LOC105371045A0A1W2PR82 267 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 HMX2A2RU54 273 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 GSTT1P30711 240 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 PDE3AQ14432 1141 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 AKAP4Q5JQC9 854 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 BEND4Q6ZU67 534 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 KCNH5Q8NCM2 988 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 C3orf58Q8NDZ4 430 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 CDK19Q9BWU1 502 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 ZC3H12CQ9C0D7 883 aaKnown RBP8.52□□□□□ -1.05
ATXN3-223ENST00000553686 C7orf69Q9H7B7 122 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 HIF3AQ9Y2N7 669 aa8.52□□□□□ -1.05
ATXN3-223ENST00000553686 MAP4P27816 1152 aaKnown RBP8.51□□□□□ -1.05
ATXN3-223ENST00000553686 CTCFP49711 727 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-223ENST00000553686 COL19A1Q14993 1142 aa8.51□□□□□ -1.05
ATXN3-223ENST00000553686 SGO2Q562F6 1265 aa8.51□□□□□ -1.05
ATXN3-223ENST00000553686 EAPPQ56P03 285 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-223ENST00000553686 C2CD4AQ8NCU7 369 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-223ENST00000553686 CCNL1Q9UK58 526 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-223ENST00000553686 KIF1BO60333 1816 aa8.51□□□□□ -1.05
ATXN3-223ENST00000553686 SPATA31E1Q6ZUB1 1445 aa8.51□□□□□ -1.05
ATXN3-223ENST00000553686 AOC2O75106 756 aa8.5□□□□□ -1.05
ATXN3-223ENST00000553686 IGLV1-40P01703 118 aa8.5□□□□□ -1.05
ATXN3-223ENST00000553686 IL2RBP14784 551 aa8.5□□□□□ -1.05
ATXN3-223ENST00000553686 RGS19P49795 217 aa8.5□□□□□ -1.05
ATXN3-223ENST00000553686 DYMQ7RTS9 669 aa8.5□□□□□ -1.05
ATXN3-223ENST00000553686 ARHGEF25Q86VW2 580 aa8.5□□□□□ -1.05
ATXN3-223ENST00000553686 SYTL4Q96C24 671 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-223ENST00000553686 ABHD8Q96I13 439 aa8.5□□□□□ -1.05
ATXN3-223ENST00000553686 FRMD6Q96NE9 622 aa8.5□□□□□ -1.05
ATXN3-223ENST00000553686 C12orf49Q9H741 205 aa8.5□□□□□ -1.05
ATXN3-223ENST00000553686 KNDC1Q76NI1 1749 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 TNS2Q63HR2 1409 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 GSC2O15499 205 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 PRPF40AO75400 957 aaKnown RBP8.49□□□□□ -1.05
ATXN3-223ENST00000553686 ADH5P11766 374 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 LIG1P18858 919 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 ARNTP27540 789 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 C9orf131Q5VYM1 1079 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 RNF43Q68DV7 783 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 TPTE2Q6XPS3 522 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 DNAJC14Q6Y2X3 702 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-223ENST00000553686 FBLIM1Q8WUP2 373 aa8.49□□□□□ -1.05
ATXN3-223ENST00000553686 CCDC86Q9H6F5 360 aaKnown RBP8.49□□□□□ -1.05
ATXN3-223ENST00000553686 PHRF1Q9P1Y6 1649 aaKnown RBP8.49□□□□□ -1.05
ATXN3-223ENST00000553686 LOC100996750A0A140TA64 210 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 FOXN1O15353 648 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 GSTP1P09211 210 aaKnown RBP8.48□□□□□ -1.05
ATXN3-223ENST00000553686 TGFB2P61812 414 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 FGD1P98174 961 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 NFIAQ12857 509 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms