RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 ROBO3Q96MS0 1386 aa13.89□□□□□ -0.19
CCNK-202ENST00000553636 GNAT2P19087 354 aa13.89□□□□□ -0.19
CCNK-202ENST00000553636 SMC5Q8IY18 1101 aa13.89□□□□□ -0.19
CCNK-202ENST00000553636 PORCNQ9H237 461 aa13.89□□□□□ -0.19
CCNK-202ENST00000553636 SH2D4AQ9H788 454 aa13.89□□□□□ -0.19
CCNK-202ENST00000553636 STAP2Q9UGK3 403 aa13.89□□□□□ -0.19
CCNK-202ENST00000553636 PARP14Q460N5 1801 aa13.89□□□□□ -0.19
CCNK-202ENST00000553636 A0A0G2JMZ2 1700 aa13.89□□□□□ -0.19
CCNK-202ENST00000553636 RLFQ13129 1914 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 SPDYE16A6NNV3 312 aaPredicted RBP13.88□□□□□ -0.19
CCNK-202ENST00000553636 IGHDP01880 384 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 EEF2P13639 858 aaKnown RBP13.88□□□□□ -0.19
CCNK-202ENST00000553636 RASA1P20936 1047 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 Q3C1V9 767 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 KIAA1755Q5JYT7 1200 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 CCDC129Q6ZRS4 1044 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 SIAH1Q8IUQ4 282 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 IFNL3Q8IZI9 196 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 SPICE1Q8N0Z3 855 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 PXYLP1Q8TE99 480 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 RNF208Q9H0X6 261 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 UNC93B1Q9H1C4 597 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 MKNK2Q9HBH9 465 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 CWC22Q9HCG8 908 aaKnown RBP13.88□□□□□ -0.19
CCNK-202ENST00000553636 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 RABGAP1Q9Y3P9 1069 aa13.88□□□□□ -0.19
CCNK-202ENST00000553636 PATL2C9JE40 543 aaKnown RBP13.87□□□□□ -0.19
CCNK-202ENST00000553636 CNMDO75829 334 aa13.87□□□□□ -0.19
CCNK-202ENST00000553636 CYP2B6P20813 491 aa13.87□□□□□ -0.19
CCNK-202ENST00000553636 MAPK4P31152 587 aa13.87□□□□□ -0.19
CCNK-202ENST00000553636 IRX6P78412 446 aaPredicted RBP13.87□□□□□ -0.19
CCNK-202ENST00000553636 WDR78Q5VTH9 848 aa13.87□□□□□ -0.19
CCNK-202ENST00000553636 SHISA4Q96DD7 197 aa13.87□□□□□ -0.19
CCNK-202ENST00000553636 NACAP1Q9BZK3 213 aa13.87□□□□□ -0.19
CCNK-202ENST00000553636 NAPBQ9H115 298 aa13.87□□□□□ -0.19
CCNK-202ENST00000553636 VCPKMTQ9H867 229 aa13.87□□□□□ -0.19
CCNK-202ENST00000553636 BTBD7Q9P203 1132 aa13.87□□□□□ -0.19
CCNK-202ENST00000553636 GJD2Q9UKL4 321 aa13.87□□□□□ -0.19
CCNK-202ENST00000553636 MYH4Q9Y623 1939 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 TRIM6-TRIM34B2RNG4 842 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 RAD21O60216 631 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 PRDM1O75626 825 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 GJB1P08034 283 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 CCNA1P78396 465 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 GPR142Q7Z601 462 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 CHD1LQ86WJ1 897 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 SOCS4Q8WXH5 440 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 LPAR1Q92633 364 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 NUDT12Q9BQG2 462 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCNK-202ENST00000553636 KANSL2Q9H9L4 492 aa13.86□□□□□ -0.19
CCNK-202ENST00000553636 COL11A1P12107 1806 aaPredicted RBP13.85□□□□□ -0.19
CCNK-202ENST00000553636 WDR46O15213 610 aaKnown RBP13.85□□□□□ -0.19
CCNK-202ENST00000553636 FLOT1O75955 427 aa13.85□□□□□ -0.19
CCNK-202ENST00000553636 HMGCRP04035 888 aa13.85□□□□□ -0.19
CCNK-202ENST00000553636 NUCB1Q02818 461 aa13.85□□□□□ -0.19
CCNK-202ENST00000553636 COG2Q14746 738 aa13.85□□□□□ -0.19
CCNK-202ENST00000553636 LBX2Q6XYB7 198 aa13.85□□□□□ -0.19
CCNK-202ENST00000553636 PLEKHH3Q7Z736 793 aa13.85□□□□□ -0.19
CCNK-202ENST00000553636 TRIB2Q92519 343 aa13.85□□□□□ -0.19
CCNK-202ENST00000553636 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 FOXP2O15409 715 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 GJA8P48165 433 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 PPARAQ07869 468 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 TRIM32Q13049 653 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 PRPF38BQ5VTL8 546 aaKnown RBP13.84□□□□□ -0.19
CCNK-202ENST00000553636 ZNF444Q8N0Y2 327 aaPredicted RBP13.84□□□□□ -0.19
CCNK-202ENST00000553636 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 U2AF1L4Q8WU68 220 aaKnown RBP13.84□□□□□ -0.19
CCNK-202ENST00000553636 RILPL2Q969X0 211 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 FAM227BQ96M60 508 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 DEFB118Q96PH6 123 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 ZNF287Q9HBT7 754 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 GOPCQ9HD26 462 aa13.84□□□□□ -0.19
CCNK-202ENST00000553636 SLC3A2P08195 630 aaKnown RBP13.83□□□□□ -0.2
CCNK-202ENST00000553636 ZKSCAN1P17029 563 aaPredicted RBP13.83□□□□□ -0.2
CCNK-202ENST00000553636 RGS2P41220 211 aa13.83□□□□□ -0.2
CCNK-202ENST00000553636 PDE4BQ07343 736 aa13.83□□□□□ -0.2
CCNK-202ENST00000553636 MORN1Q5T089 497 aa13.83□□□□□ -0.2
CCNK-202ENST00000553636 PLEKHM2Q8IWE5 1019 aa13.83□□□□□ -0.2
CCNK-202ENST00000553636 ATG4CQ96DT6 458 aa13.83□□□□□ -0.2
CCNK-202ENST00000553636 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCNK-202ENST00000553636 FBXO28Q9NVF7 368 aa13.83□□□□□ -0.2
CCNK-202ENST00000553636 HOXC10Q9NYD6 342 aa13.83□□□□□ -0.2
CCNK-202ENST00000553636 IVNS1ABPQ9Y6Y0 642 aa13.83□□□□□ -0.2
CCNK-202ENST00000553636 BRCA2P51587 3418 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 SGPL1O95470 568 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 PTPREP23469 700 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 NMIQ13287 307 aaPredicted RBP13.82□□□□□ -0.2
CCNK-202ENST00000553636 PLS1Q14651 629 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 CCL14Q16627 93 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 FAM47AQ5JRC9 791 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 FAM83BQ5T0W9 1011 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 USP6NLQ92738 828 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 CEP95Q96GE4 821 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 NUP88Q99567 741 aaPredicted RBP13.82□□□□□ -0.2
CCNK-202ENST00000553636 APBA2Q99767 749 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 MOV10L1Q9BXT6 1211 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms