RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 ABRAQ8N0Z2 381 aa11.03□□□□□ -0.64
AC055716.3-201ENST00000547533 CLASRPQ8N2M8 674 aaKnown RBP11.03□□□□□ -0.64
AC055716.3-201ENST00000547533 EAF2Q96CJ1 260 aaPredicted RBP11.03□□□□□ -0.64
AC055716.3-201ENST00000547533 SPATC1LQ9H0A9 340 aa11.03□□□□□ -0.64
AC055716.3-201ENST00000547533 C1orf115Q9H7X2 142 aa11.03□□□□□ -0.64
AC055716.3-201ENST00000547533 COL6A3P12111 3177 aa11.03□□□□□ -0.64
AC055716.3-201ENST00000547533 LTBP2Q14767 1821 aa11.02□□□□□ -0.64
AC055716.3-201ENST00000547533 SEPT4O43236 478 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 FLOT1O75955 427 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 SLC25A27O95847 323 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 IFIT2P09913 472 aaKnown RBP11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 FCER1AP12319 257 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 CYBAP13498 195 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 SHMT1P34896 483 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 SEPT2Q15019 361 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 GJC2Q5T442 439 aaPredicted RBP11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 NCAPG2Q86XI2 1143 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 ACER1Q8TDN7 264 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 FLRT1Q9NZU1 646 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 BTBD7Q9P203 1132 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 NRBP1Q9UHY1 535 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 PLXNA1Q9UIW2 1896 aa11.02□□□□□ -0.65
AC055716.3-201ENST00000547533 A0A0G2JMZ2 1700 aa11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 HMMRO75330 724 aa11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 RARBP10826 455 aa11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 ERCC3P19447 782 aa11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 COPB2P35606 906 aa11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 PLCD1P51178 756 aa11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 SLC39A5Q6ZMH5 540 aa11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 NPLOC4Q8TAT6 608 aa11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 MOV10L1Q9BXT6 1211 aaKnown RBP11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 CHMP4BQ9H444 224 aaKnown RBP11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 TLR7Q9NYK1 1049 aaKnown RBP11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 TNNQ9UQP3 1299 aa11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 MYH7P12883 1935 aa11.01□□□□□ -0.65
AC055716.3-201ENST00000547533 COL11A1P12107 1806 aaPredicted RBP11□□□□□ -0.65
AC055716.3-201ENST00000547533 POTEB2H3BUK9 544 aa11□□□□□ -0.65
AC055716.3-201ENST00000547533 ICA1Q05084 483 aa11□□□□□ -0.65
AC055716.3-201ENST00000547533 SAMD1Q6SPF0 538 aaPredicted RBP11□□□□□ -0.65
AC055716.3-201ENST00000547533 RNF180Q86T96 592 aa11□□□□□ -0.65
AC055716.3-201ENST00000547533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11□□□□□ -0.65
AC055716.3-201ENST00000547533 CCDC17Q96LX7 622 aa11□□□□□ -0.65
AC055716.3-201ENST00000547533 DNAJC2Q99543 621 aaKnown RBP11□□□□□ -0.65
AC055716.3-201ENST00000547533 RIOK1Q9BRS2 568 aaKnown RBP11□□□□□ -0.65
AC055716.3-201ENST00000547533 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
AC055716.3-201ENST00000547533 GOPCQ9HD26 462 aa11□□□□□ -0.65
AC055716.3-201ENST00000547533 ATP8A2Q9NTI2 1148 aa11□□□□□ -0.65
AC055716.3-201ENST00000547533 EXOC6BQ9Y2D4 811 aa11□□□□□ -0.65
AC055716.3-201ENST00000547533 BAZ2AQ9UIF9 1905 aaKnown RBP10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 GOLIM4O00461 696 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 WDR46O15213 610 aaKnown RBP10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 PDE6AP16499 860 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 DSG3P32926 999 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 KCTD2Q14681 263 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 C1orf53Q5VUE5 145 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 ZSCAN25Q6NSZ9 544 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 CEP85Q6P2H3 762 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 KIF1BPQ96EK5 621 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 FAM161BQ96MY7 647 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 MMP19Q99542 508 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 VCPKMTQ9H867 229 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 XPNPEP3Q9NQH7 507 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 CNPY2Q9Y2B0 182 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 CTDP1Q9Y5B0 961 aaPredicted RBP10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 TACC3Q9Y6A5 838 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 PARP14Q460N5 1801 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 ZNF532Q9HCE3 1301 aa10.99□□□□□ -0.65
AC055716.3-201ENST00000547533 A0A0C4DFX4 3053 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 DNAH12Q6ZR08 3092 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 SMCHD1A6NHR9 2005 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 RAD21O60216 631 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 ADCYAP1R1P41586 468 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 SMAD3P84022 425 aaKnown RBP10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 GABPAQ06546 454 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 TRIM60Q495X7 471 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 CCDC174Q6PII3 467 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 POTEEQ6S8J3 1075 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 SPICE1Q8N0Z3 855 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 TRPV1Q8NER1 839 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 RHPN1Q8TCX5 695 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 NUP133Q8WUM0 1156 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 SYMPKQ92797 1274 aaKnown RBP10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 BADQ92934 168 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 MAML3Q96JK9 1138 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 GUCD1Q96NT3 240 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 BCL11AQ9H165 835 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 IL1RAPL2Q9NP60 686 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 DCP1AQ9NPI6 582 aaPredicted RBP10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 TMX2Q9Y320 296 aa10.98□□□□□ -0.65
AC055716.3-201ENST00000547533 TMEM265A0A087WTH1 108 aa10.97□□□□□ -0.65
AC055716.3-201ENST00000547533 A0A1W2PRG0 241 aa10.97□□□□□ -0.65
AC055716.3-201ENST00000547533 APBB1O00213 710 aa10.97□□□□□ -0.65
AC055716.3-201ENST00000547533 CLTBP09497 229 aa10.97□□□□□ -0.65
AC055716.3-201ENST00000547533 RAG1P15918 1043 aa10.97□□□□□ -0.65
AC055716.3-201ENST00000547533 GUCY1A2P33402 732 aa10.97□□□□□ -0.65
AC055716.3-201ENST00000547533 SNX17Q15036 470 aa10.97□□□□□ -0.65
AC055716.3-201ENST00000547533 LRRC41Q15345 812 aa10.97□□□□□ -0.65
AC055716.3-201ENST00000547533 SHHQ15465 462 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms