RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SLC16A2P36021 539 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 NLRP12P59046 1061 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 GSTO1P78417 241 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 SHROOM1Q2M3G4 852 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-209ENST00000547018 POLRMTO00411 1230 aaKnown RBP14.53□□□□□ -0.08
SCAF11-209ENST00000547018 KIF5BP33176 963 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 RESP18Q5W5W9 173 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 TYW1BQ6NUM6 668 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 SMARCE1Q969G3 411 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 CEP95Q96GE4 821 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 USP40Q9NVE5 1235 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 FBXO2Q9UK22 296 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-209ENST00000547018 PARP3Q9Y6F1 533 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 COL22A1Q8NFW1 1626 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-209ENST00000547018 POSTNQ15063 836 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 PDGFDQ9GZP0 370 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-209ENST00000547018 FOXP1Q9H334 677 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-209ENST00000547018 ANAPC4Q9UJX5 808 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 BTAF1O14981 1849 aa14.52□□□□□ -0.08
SCAF11-209ENST00000547018 A0A087X0B3 334 aa14.52□□□□□ -0.08
SCAF11-209ENST00000547018 ERCC3P19447 782 aa14.52□□□□□ -0.08
SCAF11-209ENST00000547018 ATP2B4P23634 1241 aa14.52□□□□□ -0.08
SCAF11-209ENST00000547018 NAPAP54920 295 aa14.52□□□□□ -0.08
SCAF11-209ENST00000547018 UBASH3AP57075 661 aa14.52□□□□□ -0.08
SCAF11-209ENST00000547018 LETM2Q2VYF4 491 aa14.52□□□□□ -0.08
SCAF11-209ENST00000547018 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.52□□□□□ -0.08
SCAF11-209ENST00000547018 CICQ96RK0 1608 aaPredicted RBP14.52□□□□□ -0.09
SCAF11-209ENST00000547018 TMEM232C9JQI7 657 aa14.52□□□□□ -0.09
SCAF11-209ENST00000547018 PRPF3O43395 683 aaKnown RBP14.52□□□□□ -0.09
SCAF11-209ENST00000547018 PPP6R2O75170 966 aa14.52□□□□□ -0.09
SCAF11-209ENST00000547018 PLA2G4DQ86XP0 818 aa14.52□□□□□ -0.09
SCAF11-209ENST00000547018 KIAA1524Q8TCG1 905 aa14.52□□□□□ -0.09
SCAF11-209ENST00000547018 BIN2Q9UBW5 565 aaPredicted RBP14.52□□□□□ -0.09
SCAF11-209ENST00000547018 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.52□□□□□ -0.09
SCAF11-209ENST00000547018 V9GYY5 206 aaPredicted RBP14.52□□□□□ -0.09
SCAF11-209ENST00000547018 RASA1P20936 1047 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 SNAP25P60880 206 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 FANCCQ00597 558 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 IKQ13123 557 aaPredicted RBP14.51□□□□□ -0.09
SCAF11-209ENST00000547018 CCDC96Q2M329 555 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 RTFDC1Q9BY42 306 aaPredicted RBP14.51□□□□□ -0.09
SCAF11-209ENST00000547018 CNTNAP5Q8WYK1 1306 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 USP17L5A8MUK1 530 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 BBOX1O75936 387 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 PTPREP23469 700 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 FUT2Q10981 343 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 NFIAQ12857 509 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 COA7Q96BR5 231 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 RBM28Q9NW13 759 aaKnown RBP14.51□□□□□ -0.09
SCAF11-209ENST00000547018 DAGLAQ9Y4D2 1042 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 FAM205AQ6ZU69 1335 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 CALM1P0DP23 149 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 CALM2P0DP24 149 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 CALM3P0DP25 149 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 KARSQ15046 597 aaKnown RBP14.51□□□□□ -0.09
SCAF11-209ENST00000547018 GPIHBP1Q8IV16 184 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 CEP131Q9UPN4 1083 aa14.51□□□□□ -0.09
SCAF11-209ENST00000547018 EN1Q05925 392 aaPredicted RBP14.5□□□□□ -0.09
SCAF11-209ENST00000547018 CERS5Q8N5B7 392 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 PIGSQ96S52 555 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 PHF20Q9BVI0 1012 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 SAMSN1Q9NSI8 373 aaKnown RBP14.5□□□□□ -0.09
SCAF11-209ENST00000547018 NFE2L3Q9Y4A8 694 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 FLT1P17948 1338 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 CYTH3O43739 400 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 TNNT1P13805 278 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 BMP6P22004 513 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 ZFPM1Q8IX07 1006 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 GJA10Q969M2 543 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 STK36Q9NRP7 1315 aa14.5□□□□□ -0.09
SCAF11-209ENST00000547018 FMR1Q06787 632 aaKnown RBP eCLIP14.49□□□□□ -0.091e-7■■□□□ 11.8
SCAF11-209ENST00000547018 KCTD1Q719H9 257 aa14.49□□□□□ -0.09
SCAF11-209ENST00000547018 C2CD5Q86YS7 1000 aa14.49□□□□□ -0.09
SCAF11-209ENST00000547018 DDX4Q9NQI0 724 aaKnown RBP14.49□□□□□ -0.09
SCAF11-209ENST00000547018 MAN1B1Q9UKM7 699 aa14.49□□□□□ -0.09
SCAF11-209ENST00000547018 ORC4O43929 436 aa14.49□□□□□ -0.09
SCAF11-209ENST00000547018 BLIDQ8IZY5 108 aa14.49□□□□□ -0.09
SCAF11-209ENST00000547018 HOOK1Q9UJC3 728 aaKnown RBP14.49□□□□□ -0.09
SCAF11-209ENST00000547018 MARCH6O60337 910 aa14.49□□□□□ -0.09
SCAF11-209ENST00000547018 DDAH1O94760 285 aa14.49□□□□□ -0.09
SCAF11-209ENST00000547018 PARP1P09874 1014 aaKnown RBP14.49□□□□□ -0.09
SCAF11-209ENST00000547018 AKR1B1P15121 316 aa14.49□□□□□ -0.09
SCAF11-209ENST00000547018 WWC2Q6AWC2 1192 aa14.49□□□□□ -0.09
SCAF11-209ENST00000547018 LRRC8AQ8IWT6 810 aa14.49□□□□□ -0.09
SCAF11-209ENST00000547018 TAL1P17542 331 aaPredicted RBP14.48□□□□□ -0.09
SCAF11-209ENST00000547018 MYL5Q02045 173 aa14.48□□□□□ -0.09
SCAF11-209ENST00000547018 TMEM260Q9NX78 707 aa14.48□□□□□ -0.09
SCAF11-209ENST00000547018 PCNTO95613 3336 aa14.48□□□□□ -0.09
SCAF11-209ENST00000547018 SFPQP23246 707 aaKnown RBP eCLIP14.48□□□□□ -0.09
SCAF11-209ENST00000547018 HSP90AA2PQ14568 343 aaPredicted RBP14.48□□□□□ -0.09
SCAF11-209ENST00000547018 NAA30Q147X3 362 aaPredicted RBP14.48□□□□□ -0.09
SCAF11-209ENST00000547018 SLC35G1Q2M3R5 365 aa14.48□□□□□ -0.09
SCAF11-209ENST00000547018 TTBK2Q6IQ55 1244 aa14.48□□□□□ -0.09
SCAF11-209ENST00000547018 ZBTB9Q96C00 473 aa14.48□□□□□ -0.09
SCAF11-209ENST00000547018 TRIM34Q9BYJ4 488 aa14.48□□□□□ -0.09
SCAF11-209ENST00000547018 SEC63Q9UGP8 760 aaKnown RBP14.48□□□□□ -0.09
SCAF11-209ENST00000547018 HPSEQ9Y251 543 aa14.48□□□□□ -0.09
SCAF11-209ENST00000547018 SRPRBQ9Y5M8 271 aaKnown RBP14.48□□□□□ -0.09
SCAF11-209ENST00000547018 SMTNL1A8MU46 457 aa14.47□□□□□ -0.09
SCAF11-209ENST00000547018 ADRA2BP18089 450 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms