RNA–Protein interactions for RNA: ENST00000542296.6

CERS1-202, Transcript of ceramide synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CERS1, Length 1,947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERS1-202ENST00000542296 ILDR2Q71H61 639 aa24.03■■□□□ 1.44
CERS1-202ENST00000542296 SYT17Q9BSW7 474 aa24.03■■□□□ 1.44
CERS1-202ENST00000542296 HERC5Q9UII4 1024 aaKnown RBP24.03■■□□□ 1.44
CERS1-202ENST00000542296 TTLL1O95922 423 aa24.02■■□□□ 1.44
CERS1-202ENST00000542296 CSRNP1Q96S65 589 aa24.02■■□□□ 1.44
CERS1-202ENST00000542296 CFAP45Q9UL16 551 aa24.02■■□□□ 1.44
CERS1-202ENST00000542296 MYH4Q9Y623 1939 aa24.02■■□□□ 1.44
CERS1-202ENST00000542296 TCP10L2B9ZVM9 353 aa24.02■■□□□ 1.44
CERS1-202ENST00000542296 LETM1O95202 739 aaPredicted RBP24.02■■□□□ 1.44
CERS1-202ENST00000542296 LMNB1P20700 586 aa24.02■■□□□ 1.44
CERS1-202ENST00000542296 AKAP17AQ02040 695 aaKnown RBP24.02■■□□□ 1.44
CERS1-202ENST00000542296 TRIM29Q14134 588 aa24.02■■□□□ 1.44
CERS1-202ENST00000542296 LZTS2Q9BRK4 669 aa24.02■■□□□ 1.44
CERS1-202ENST00000542296 SLURP2P0DP57 97 aa24.01■■□□□ 1.43
CERS1-202ENST00000542296 U2AF2P26368 475 aaKnown RBP eCLIP24.01■■□□□ 1.43
CERS1-202ENST00000542296 GMPSP49915 693 aaPredicted RBP24.01■■□□□ 1.43
CERS1-202ENST00000542296 NBPF9Q3BBW0 867 aa24.01■■□□□ 1.43
CERS1-202ENST00000542296 CERKLQ49MI3 558 aaPredicted RBP24.01■■□□□ 1.43
CERS1-202ENST00000542296 CCDC183Q5T5S1 534 aa24.01■■□□□ 1.43
CERS1-202ENST00000542296 V9GY48 417 aaPredicted RBP24.01■■□□□ 1.43
CERS1-202ENST00000542296 SHTN1A0MZ66 631 aa24■■□□□ 1.43
CERS1-202ENST00000542296 SMARCA1P28370 1054 aa24■■□□□ 1.43
CERS1-202ENST00000542296 STAG2Q8N3U4 1231 aa24■■□□□ 1.43
CERS1-202ENST00000542296 SPATA32Q96LK8 384 aa24■■□□□ 1.43
CERS1-202ENST00000542296 PGAP2Q9UHJ9 254 aa24■■□□□ 1.43
CERS1-202ENST00000542296 BAZ2BQ9UIF8 2168 aaKnown RBP24■■□□□ 1.43
CERS1-202ENST00000542296 MMP1P03956 469 aa24■■□□□ 1.43
CERS1-202ENST00000542296 SNHG28P0DPA3 235 aa24■■□□□ 1.43
CERS1-202ENST00000542296 ARHGAP27Q6ZUM4 889 aa24■■□□□ 1.43
CERS1-202ENST00000542296 LEO1Q8WVC0 666 aaPredicted RBP24■■□□□ 1.43
CERS1-202ENST00000542296 TRIM34Q9BYJ4 488 aa24■■□□□ 1.43
CERS1-202ENST00000542296 SYCE3A1L190 88 aa23.99■■□□□ 1.43
CERS1-202ENST00000542296 KIF28PB7ZC32 967 aa23.99■■□□□ 1.43
CERS1-202ENST00000542296 MKL1Q969V6 931 aa23.99■■□□□ 1.43
CERS1-202ENST00000542296 ZNF396Q96N95 335 aaPredicted RBP23.99■■□□□ 1.43
CERS1-202ENST00000542296 TFIP11Q9UBB9 837 aaKnown RBP23.99■■□□□ 1.43
CERS1-202ENST00000542296 ZNF541Q9H0D2 1346 aa23.99■■□□□ 1.43
CERS1-202ENST00000542296 SRCAPQ6ZRS2 3230 aa23.99■■□□□ 1.43
CERS1-202ENST00000542296 FAM196BA6NMK8 535 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 TBC1D12O60347 775 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 MICALL2Q8IY33 904 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 KANSL2Q9H9L4 492 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 CNOT7Q9UIV1 285 aaKnown RBP23.98■■□□□ 1.43
CERS1-202ENST00000542296 XBP1P17861 261 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 MAP3K10Q02779 954 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 TMEM179Q6ZVK1 233 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 SPZ1Q9BXG8 430 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 VEZTQ9HBM0 779 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 NYAP2Q9P242 653 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 RCOR1Q9UKL0 485 aa23.98■■□□□ 1.43
CERS1-202ENST00000542296 PARP1P09874 1014 aaKnown RBP23.97■■□□□ 1.43
CERS1-202ENST00000542296 PDHBP11177 359 aa23.97■■□□□ 1.43
CERS1-202ENST00000542296 PFKFB3Q16875 520 aaPredicted RBP23.97■■□□□ 1.43
CERS1-202ENST00000542296 MYSM1Q5VVJ2 828 aa23.97■■□□□ 1.43
CERS1-202ENST00000542296 SHISA4Q96DD7 197 aa23.97■■□□□ 1.43
CERS1-202ENST00000542296 CLIP2Q9UDT6 1046 aa23.97■■□□□ 1.43
CERS1-202ENST00000542296 GJA3Q9Y6H8 435 aa23.97■■□□□ 1.43
CERS1-202ENST00000542296 MPHOSPH10O00566 681 aaKnown RBP23.96■■□□□ 1.43
CERS1-202ENST00000542296 EGFRP00533 1210 aa23.96■■□□□ 1.43
CERS1-202ENST00000542296 FOXP1Q9H334 677 aaPredicted RBP23.96■■□□□ 1.43
CERS1-202ENST00000542296 CYTH3O43739 400 aa23.96■■□□□ 1.43
CERS1-202ENST00000542296 SCG2P13521 617 aa23.96■■□□□ 1.43
CERS1-202ENST00000542296 SLC35G1Q2M3R5 365 aa23.96■■□□□ 1.43
CERS1-202ENST00000542296 GPC2Q8N158 579 aa23.96■■□□□ 1.43
CERS1-202ENST00000542296 USP28Q96RU2 1077 aa23.96■■□□□ 1.43
CERS1-202ENST00000542296 PHF20Q9BVI0 1012 aa23.96■■□□□ 1.43
CERS1-202ENST00000542296 KLRF2D3W0D1 207 aa23.95■■□□□ 1.42
CERS1-202ENST00000542296 SAFBQ15424 915 aaKnown RBP eCLIP23.95■■□□□ 1.42
CERS1-202ENST00000542296 ABCB5Q2M3G0 1257 aa23.95■■□□□ 1.42
CERS1-202ENST00000542296 CLEC10AQ8IUN9 316 aa23.95■■□□□ 1.42
CERS1-202ENST00000542296 TMEM39BQ9GZU3 492 aa23.95■■□□□ 1.42
CERS1-202ENST00000542296 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.95■■□□□ 1.42
CERS1-202ENST00000542296 RTEL1Q9NZ71 1219 aa23.95■■□□□ 1.42
CERS1-202ENST00000542296 GOLGA6L4A6NEF3 574 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 TNNI2P48788 182 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 TNFAIP1Q13829 316 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 ASPRV1Q53RT3 343 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 PANK2Q9BZ23 570 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 POLR3EQ9NVU0 708 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 KCNJ14Q9UNX9 436 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 USP17L5A8MUK1 530 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 USP17L2Q6R6M4 530 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 SIAH1Q8IUQ4 282 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 DIS3L2Q8IYB7 885 aaKnown RBP23.94■■□□□ 1.42
CERS1-202ENST00000542296 FAM177A1Q8N128 213 aaPredicted RBP23.94■■□□□ 1.42
CERS1-202ENST00000542296 SH3GLB2Q9NR46 395 aa23.94■■□□□ 1.42
CERS1-202ENST00000542296 hCG_1642624A0A1W2PR95 340 aa23.93■■□□□ 1.42
CERS1-202ENST00000542296 NASPP49321 788 aaPredicted RBP23.93■■□□□ 1.42
CERS1-202ENST00000542296 RRP1BQ14684 758 aaKnown RBP23.93■■□□□ 1.42
CERS1-202ENST00000542296 SAMD7Q7Z3H4 446 aa23.93■■□□□ 1.42
CERS1-202ENST00000542296 NOSTRINQ8IVI9 506 aa23.93■■□□□ 1.42
CERS1-202ENST00000542296 LRRC47Q8N1G4 583 aaKnown RBP23.93■■□□□ 1.42
CERS1-202ENST00000542296 VPS54Q9P1Q0 977 aa23.93■■□□□ 1.42
CERS1-202ENST00000542296 SYNPO2Q9UMS6 1093 aa23.93■■□□□ 1.42
CERS1-202ENST00000542296 BTBD18B2RXH4 712 aa23.92■■□□□ 1.42
CERS1-202ENST00000542296 EEF2P13639 858 aaKnown RBP23.92■■□□□ 1.42
CERS1-202ENST00000542296 SHROOM1Q2M3G4 852 aaPredicted RBP23.92■■□□□ 1.42
CERS1-202ENST00000542296 RBM26Q5T8P6 1007 aaKnown RBP23.92■■□□□ 1.42
CERS1-202ENST00000542296 RASGRP2Q7LDG7 609 aa23.92■■□□□ 1.42
CERS1-202ENST00000542296 TSPY26PQ9H489 355 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms