RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 RNF208Q9H0X6 261 aa26.37■■□□□ 1.81
C2CD3-216ENST00000541922 VCPKMTQ9H867 229 aa26.37■■□□□ 1.81
C2CD3-216ENST00000541922 EEF2P13639 858 aaKnown RBP26.36■■□□□ 1.81
C2CD3-216ENST00000541922 CCNA1P78396 465 aa26.36■■□□□ 1.81
C2CD3-216ENST00000541922 COG2Q14746 738 aa26.36■■□□□ 1.81
C2CD3-216ENST00000541922 LBX2Q6XYB7 198 aa26.36■■□□□ 1.81
C2CD3-216ENST00000541922 CHD1LQ86WJ1 897 aa26.36■■□□□ 1.81
C2CD3-216ENST00000541922 NAPBQ9H115 298 aa26.36■■□□□ 1.81
C2CD3-216ENST00000541922 PORCNQ9H237 461 aa26.36■■□□□ 1.81
C2CD3-216ENST00000541922 ZNF287Q9HBT7 754 aa26.36■■□□□ 1.81
C2CD3-216ENST00000541922 PLXNB2O15031 1838 aa26.36■■□□□ 1.81
C2CD3-216ENST00000541922 SPDYE16A6NNV3 312 aaPredicted RBP26.35■■□□□ 1.81
C2CD3-216ENST00000541922 CNMDO75829 334 aa26.35■■□□□ 1.81
C2CD3-216ENST00000541922 GJB1P08034 283 aa26.35■■□□□ 1.81
C2CD3-216ENST00000541922 RASA1P20936 1047 aa26.35■■□□□ 1.81
C2CD3-216ENST00000541922 KIAA1755Q5JYT7 1200 aa26.35■■□□□ 1.81
C2CD3-216ENST00000541922 SPICE1Q8N0Z3 855 aa26.35■■□□□ 1.81
C2CD3-216ENST00000541922 NKX2-3Q8TAU0 364 aa26.35■■□□□ 1.81
C2CD3-216ENST00000541922 SOCS4Q8WXH5 440 aa26.35■■□□□ 1.81
C2CD3-216ENST00000541922 NUDT12Q9BQG2 462 aa26.35■■□□□ 1.81
C2CD3-216ENST00000541922 CWC22Q9HCG8 908 aaKnown RBP26.35■■□□□ 1.81
C2CD3-216ENST00000541922 HOXC10Q9NYD6 342 aa26.35■■□□□ 1.81
C2CD3-216ENST00000541922 TNRC18O15417 2968 aaPredicted RBP26.35■■□□□ 1.81
C2CD3-216ENST00000541922 GREB1LQ9C091 1923 aaPredicted RBP26.34■■□□□ 1.81
C2CD3-216ENST00000541922 NUCB1Q02818 461 aa26.34■■□□□ 1.81
C2CD3-216ENST00000541922 UNC93B1Q9H1C4 597 aa26.34■■□□□ 1.81
C2CD3-216ENST00000541922 CYP2B6P20813 491 aa26.33■■□□□ 1.81
C2CD3-216ENST00000541922 CCDC129Q6ZRS4 1044 aa26.33■■□□□ 1.81
C2CD3-216ENST00000541922 GPR142Q7Z601 462 aa26.33■■□□□ 1.81
C2CD3-216ENST00000541922 PLEKHH3Q7Z736 793 aa26.33■■□□□ 1.81
C2CD3-216ENST00000541922 ZNF444Q8N0Y2 327 aaPredicted RBP26.33■■□□□ 1.81
C2CD3-216ENST00000541922 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.33■■□□□ 1.81
C2CD3-216ENST00000541922 BTBD7Q9P203 1132 aa26.33■■□□□ 1.81
C2CD3-216ENST00000541922 TRIM6-TRIM34B2RNG4 842 aa26.32■■□□□ 1.8
C2CD3-216ENST00000541922 WDR46O15213 610 aaKnown RBP26.32■■□□□ 1.8
C2CD3-216ENST00000541922 HMGCRP04035 888 aa26.32■■□□□ 1.8
C2CD3-216ENST00000541922 SLC3A2P08195 630 aaKnown RBP26.32■■□□□ 1.8
C2CD3-216ENST00000541922 GJA8P48165 433 aa26.32■■□□□ 1.8
C2CD3-216ENST00000541922 GOPCQ9HD26 462 aa26.32■■□□□ 1.8
C2CD3-216ENST00000541922 HELLSQ9NRZ9 838 aa26.32■■□□□ 1.8
C2CD3-216ENST00000541922 RLFQ13129 1914 aa26.31■■□□□ 1.8
C2CD3-216ENST00000541922 PRDM1O75626 825 aa26.31■■□□□ 1.8
C2CD3-216ENST00000541922 FLOT1O75955 427 aa26.31■■□□□ 1.8
C2CD3-216ENST00000541922 WDR78Q5VTH9 848 aa26.31■■□□□ 1.8
C2CD3-216ENST00000541922 TICAM2Q86XR7 235 aa26.31■■□□□ 1.8
C2CD3-216ENST00000541922 RAD21O60216 631 aa26.3■■□□□ 1.8
C2CD3-216ENST00000541922 PDE4BQ07343 736 aa26.3■■□□□ 1.8
C2CD3-216ENST00000541922 PPARAQ07869 468 aa26.3■■□□□ 1.8
C2CD3-216ENST00000541922 PLEKHM2Q8IWE5 1019 aa26.3■■□□□ 1.8
C2CD3-216ENST00000541922 RILPL2Q969X0 211 aa26.3■■□□□ 1.8
C2CD3-216ENST00000541922 SHISA4Q96DD7 197 aa26.3■■□□□ 1.8
C2CD3-216ENST00000541922 XRCC5P13010 732 aaKnown RBP26.29■■□□□ 1.8
C2CD3-216ENST00000541922 DSG3P32926 999 aa26.29■■□□□ 1.8
C2CD3-216ENST00000541922 RGS2P41220 211 aa26.29■■□□□ 1.8
C2CD3-216ENST00000541922 MORN1Q5T089 497 aa26.29■■□□□ 1.8
C2CD3-216ENST00000541922 MB21D1Q8N884 522 aa26.29■■□□□ 1.8
C2CD3-216ENST00000541922 U2AF1L4Q8WU68 220 aaKnown RBP26.29■■□□□ 1.8
C2CD3-216ENST00000541922 OSBPL3Q9H4L5 887 aa26.29■■□□□ 1.8
C2CD3-216ENST00000541922 NYAP2Q9P242 653 aa26.29■■□□□ 1.8
C2CD3-216ENST00000541922 PARP14Q460N5 1801 aa26.28■■□□□ 1.8
C2CD3-216ENST00000541922 MYH4Q9Y623 1939 aa26.28■■□□□ 1.8
C2CD3-216ENST00000541922 IRX6P78412 446 aaPredicted RBP26.28■■□□□ 1.8
C2CD3-216ENST00000541922 MCMDC2Q4G0Z9 681 aa26.28■■□□□ 1.8
C2CD3-216ENST00000541922 PRPF38BQ5VTL8 546 aaKnown RBP26.28■■□□□ 1.8
C2CD3-216ENST00000541922 SAMD1Q6SPF0 538 aaPredicted RBP26.28■■□□□ 1.8
C2CD3-216ENST00000541922 TRIB2Q92519 343 aa26.28■■□□□ 1.8
C2CD3-216ENST00000541922 USP6NLQ92738 828 aa26.28■■□□□ 1.8
C2CD3-216ENST00000541922 FAM227BQ96M60 508 aa26.28■■□□□ 1.8
C2CD3-216ENST00000541922 IVNS1ABPQ9Y6Y0 642 aa26.28■■□□□ 1.8
C2CD3-216ENST00000541922 A0A0G2JMZ2 1700 aa26.28■■□□□ 1.8
C2CD3-216ENST00000541922 FOXP2O15409 715 aa26.27■■□□□ 1.8
C2CD3-216ENST00000541922 SGPL1O95470 568 aa26.27■■□□□ 1.8
C2CD3-216ENST00000541922 TRMT44Q8IYL2 757 aaKnown RBP26.27■■□□□ 1.8
C2CD3-216ENST00000541922 ATG4CQ96DT6 458 aa26.27■■□□□ 1.8
C2CD3-216ENST00000541922 DEFB118Q96PH6 123 aa26.27■■□□□ 1.8
C2CD3-216ENST00000541922 IGKV6D-41A0A0C4DH26 115 aa26.26■■□□□ 1.79
C2CD3-216ENST00000541922 A0A0D9SFI3 127 aa26.26■■□□□ 1.79
C2CD3-216ENST00000541922 MAP2K5Q13163 448 aa26.26■■□□□ 1.79
C2CD3-216ENST00000541922 VPS53Q5VIR6 699 aa26.26■■□□□ 1.79
C2CD3-216ENST00000541922 APBA2Q99767 749 aa26.26■■□□□ 1.79
C2CD3-216ENST00000541922 SPATC1LQ9H0A9 340 aa26.26■■□□□ 1.79
C2CD3-216ENST00000541922 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.26■■□□□ 1.79
C2CD3-216ENST00000541922 PAK6Q9NQU5 681 aaPredicted RBP26.26■■□□□ 1.79
C2CD3-216ENST00000541922 CLIP2Q9UDT6 1046 aa26.26■■□□□ 1.79
C2CD3-216ENST00000541922 RPTORQ8N122 1335 aa26.25■■□□□ 1.79
C2CD3-216ENST00000541922 SLC15A5A6NIM6 579 aa26.25■■□□□ 1.79
C2CD3-216ENST00000541922 TSPY3P0CV98 308 aa26.25■■□□□ 1.79
C2CD3-216ENST00000541922 TSPY8P0CW00 308 aa26.25■■□□□ 1.79
C2CD3-216ENST00000541922 ZKSCAN1P17029 563 aaPredicted RBP26.25■■□□□ 1.79
C2CD3-216ENST00000541922 PTPREP23469 700 aa26.25■■□□□ 1.79
C2CD3-216ENST00000541922 TRIM32Q13049 653 aa26.25■■□□□ 1.79
C2CD3-216ENST00000541922 NMIQ13287 307 aaPredicted RBP26.25■■□□□ 1.79
C2CD3-216ENST00000541922 CEP95Q96GE4 821 aa26.25■■□□□ 1.79
C2CD3-216ENST00000541922 MOV10L1Q9BXT6 1211 aaKnown RBP26.25■■□□□ 1.79
C2CD3-216ENST00000541922 HMX1Q9NP08 348 aaPredicted RBP26.25■■□□□ 1.79
C2CD3-216ENST00000541922 BRCA2P51587 3418 aa26.25■■□□□ 1.79
C2CD3-216ENST00000541922 PLS1Q14651 629 aa26.24■■□□□ 1.79
C2CD3-216ENST00000541922 FAM83BQ5T0W9 1011 aa26.24■■□□□ 1.79
C2CD3-216ENST00000541922 NEDD1Q8NHV4 660 aa26.24■■□□□ 1.79
C2CD3-216ENST00000541922 FBXO28Q9NVF7 368 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms