RNA–Protein interactions for RNA: ENST00000537315.5

RFC5-208, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-208ENST00000537315 TANGO6Q9C0B7 1094 aa14.41□□□□□ -0.1
RFC5-208ENST00000537315 SPDYE16A6NNV3 312 aaPredicted RBP14.4□□□□□ -0.1
RFC5-208ENST00000537315 APPP05067 770 aa14.4□□□□□ -0.1
RFC5-208ENST00000537315 PDE1AP54750 535 aa14.4□□□□□ -0.1
RFC5-208ENST00000537315 UBXN2AP68543 259 aa14.4□□□□□ -0.1
RFC5-208ENST00000537315 IRX6P78412 446 aaPredicted RBP14.4□□□□□ -0.1
RFC5-208ENST00000537315 RNF208Q9H0X6 261 aa14.4□□□□□ -0.1
RFC5-208ENST00000537315 ARHGEF10LQ9HCE6 1279 aa14.4□□□□□ -0.1
RFC5-208ENST00000537315 IGHDP01880 384 aa14.39□□□□□ -0.11
RFC5-208ENST00000537315 RASA1P20936 1047 aa14.39□□□□□ -0.11
RFC5-208ENST00000537315 TRIM32Q13049 653 aa14.39□□□□□ -0.11
RFC5-208ENST00000537315 SBK1Q52WX2 424 aa14.39□□□□□ -0.11
RFC5-208ENST00000537315 ZMYM1Q5SVZ6 1142 aa14.39□□□□□ -0.11
RFC5-208ENST00000537315 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
RFC5-208ENST00000537315 SIAH1Q8IUQ4 282 aa14.39□□□□□ -0.11
RFC5-208ENST00000537315 GTF3C2Q8WUA4 911 aaPredicted RBP14.39□□□□□ -0.11
RFC5-208ENST00000537315 BTBD7Q9P203 1132 aa14.39□□□□□ -0.11
RFC5-208ENST00000537315 GJD2Q9UKL4 321 aa14.39□□□□□ -0.11
RFC5-208ENST00000537315 SUPT16HQ9Y5B9 1047 aaKnown RBP14.39□□□□□ -0.11
RFC5-208ENST00000537315 PRDM1O75626 825 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 HMGCRP04035 888 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 EEF2P13639 858 aaKnown RBP14.38□□□□□ -0.11
RFC5-208ENST00000537315 GNAT2P19087 354 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 CYP2B6P20813 491 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 LRRFIP1Q32MZ4 808 aaKnown RBP14.38□□□□□ -0.11
RFC5-208ENST00000537315 WDR78Q5VTH9 848 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 PRPF38BQ5VTL8 546 aaKnown RBP14.38□□□□□ -0.11
RFC5-208ENST00000537315 GIMAP6Q6P9H5 292 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 GPR142Q7Z601 462 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 CCAR1Q8IX12 1150 aaKnown RBP14.38□□□□□ -0.11
RFC5-208ENST00000537315 SMC5Q8IY18 1101 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 PXYLP1Q8TE99 480 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 TRIB2Q92519 343 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 CCDC17Q96LX7 622 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.38□□□□□ -0.11
RFC5-208ENST00000537315 VCPKMTQ9H867 229 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 CWC22Q9HCG8 908 aaKnown RBP14.38□□□□□ -0.11
RFC5-208ENST00000537315 STAP2Q9UGK3 403 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 TMX2Q9Y320 296 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 RABGAP1Q9Y3P9 1069 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 MCM3APO60318 1980 aa14.38□□□□□ -0.11
RFC5-208ENST00000537315 FOXP2O15409 715 aa14.37□□□□□ -0.11
RFC5-208ENST00000537315 RAD21O60216 631 aa14.37□□□□□ -0.11
RFC5-208ENST00000537315 MAPK4P31152 587 aa14.37□□□□□ -0.11
RFC5-208ENST00000537315 IFNL3Q8IZI9 196 aa14.37□□□□□ -0.11
RFC5-208ENST00000537315 SOCS4Q8WXH5 440 aa14.37□□□□□ -0.11
RFC5-208ENST00000537315 RWDD1Q9H446 243 aaPredicted RBP14.37□□□□□ -0.11
RFC5-208ENST00000537315 SH2D4AQ9H788 454 aa14.37□□□□□ -0.11
RFC5-208ENST00000537315 A0A0D9SFI3 127 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 PATL2C9JE40 543 aaKnown RBP14.36□□□□□ -0.11
RFC5-208ENST00000537315 FLOT1O75955 427 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 GJB1P08034 283 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 GJA8P48165 433 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 AAMPQ13685 434 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 CCL14Q16627 93 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 LBX2Q6XYB7 198 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 PLEKHH3Q7Z736 793 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 U2AF1L4Q8WU68 220 aaKnown RBP14.36□□□□□ -0.11
RFC5-208ENST00000537315 EVI5LQ96CN4 794 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 ATG4CQ96DT6 458 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 FAM227BQ96M60 508 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 DEFB118Q96PH6 123 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 NUDT12Q9BQG2 462 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.36□□□□□ -0.11
RFC5-208ENST00000537315 NAPBQ9H115 298 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 MKNK2Q9HBH9 465 aa14.36□□□□□ -0.11
RFC5-208ENST00000537315 ZKSCAN1P17029 563 aaPredicted RBP14.35□□□□□ -0.11
RFC5-208ENST00000537315 MORN1Q5T089 497 aa14.35□□□□□ -0.11
RFC5-208ENST00000537315 VPS53Q5VIR6 699 aa14.35□□□□□ -0.11
RFC5-208ENST00000537315 CHD1LQ86WJ1 897 aa14.35□□□□□ -0.11
RFC5-208ENST00000537315 LPAR1Q92633 364 aa14.35□□□□□ -0.11
RFC5-208ENST00000537315 NUP88Q99567 741 aaPredicted RBP14.35□□□□□ -0.11
RFC5-208ENST00000537315 APBA2Q99767 749 aa14.35□□□□□ -0.11
RFC5-208ENST00000537315 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
RFC5-208ENST00000537315 KANSL2Q9H9L4 492 aa14.35□□□□□ -0.11
RFC5-208ENST00000537315 FBXO28Q9NVF7 368 aa14.35□□□□□ -0.11
RFC5-208ENST00000537315 PLIN4Q96Q06 1357 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 SMCHD1A6NHR9 2005 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 TRIM6-TRIM34B2RNG4 842 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 WDR46O15213 610 aaKnown RBP14.34□□□□□ -0.11
RFC5-208ENST00000537315 RGS2P41220 211 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 CCNA1P78396 465 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 CTDSPL2Q05D32 466 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 PPARAQ07869 468 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 PLS1Q14651 629 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 COG2Q14746 738 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 FAM83BQ5T0W9 1011 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 NKX2-3Q8TAU0 364 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 USP6NLQ92738 828 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 RILPL2Q969X0 211 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 MOV10L1Q9BXT6 1211 aaKnown RBP14.34□□□□□ -0.11
RFC5-208ENST00000537315 GOPCQ9HD26 462 aa14.34□□□□□ -0.11
RFC5-208ENST00000537315 PAK6Q9NQU5 681 aaPredicted RBP14.34□□□□□ -0.11
RFC5-208ENST00000537315 IGKV6D-41A0A0C4DH26 115 aa14.33□□□□□ -0.12
RFC5-208ENST00000537315 FARP2O94887 1054 aaPredicted RBP14.33□□□□□ -0.12
RFC5-208ENST00000537315 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
RFC5-208ENST00000537315 DSG3P32926 999 aa14.33□□□□□ -0.12
RFC5-208ENST00000537315 NUCB1Q02818 461 aa14.33□□□□□ -0.12
RFC5-208ENST00000537315 MAP2K5Q13163 448 aa14.33□□□□□ -0.12
RFC5-208ENST00000537315 NMIQ13287 307 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms