RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 A0A0G2JMZ2 1700 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 FOXP2O15409 715 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 ADCY3O60266 1144 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 PLEKHM2Q8IWE5 1019 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 PAGR1Q9BTK6 254 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 ARHGEF10LQ9HCE6 1279 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 GJD2Q9UKL4 321 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 TMX2Q9Y320 296 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 CNMDO75829 334 aa21.33■■□□□ 1
TNFRSF1A-209ENST00000536717 ELNP15502 786 aa21.33■■□□□ 1
TNFRSF1A-209ENST00000536717 LBX2Q6XYB7 198 aa21.33■■□□□ 1
TNFRSF1A-209ENST00000536717 PXYLP1Q8TE99 480 aa21.33■■□□□ 1
TNFRSF1A-209ENST00000536717 PORCNQ9H237 461 aa21.33■■□□□ 1
TNFRSF1A-209ENST00000536717 RABGAP1Q9Y3P9 1069 aa21.33■■□□□ 1
TNFRSF1A-209ENST00000536717 SPDYE16A6NNV3 312 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-209ENST00000536717 EEF2P13639 858 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-209ENST00000536717 NACAP1Q9BZK3 213 aa21.32■■□□□ 1
TNFRSF1A-209ENST00000536717 OSBPL3Q9H4L5 887 aa21.32■■□□□ 1
TNFRSF1A-209ENST00000536717 VCPKMTQ9H867 229 aa21.32■■□□□ 1
TNFRSF1A-209ENST00000536717 KANSL2Q9H9L4 492 aa21.32■■□□□ 1
TNFRSF1A-209ENST00000536717 LPAR1Q92633 364 aa21.31■■□□□ 1
TNFRSF1A-209ENST00000536717 NAPBQ9H115 298 aa21.31■■□□□ 1
TNFRSF1A-209ENST00000536717 MKNK2Q9HBH9 465 aa21.31■■□□□ 1
TNFRSF1A-209ENST00000536717 ZNFX1Q9P2E3 1918 aaKnown RBP21.3■■□□□ 1
TNFRSF1A-209ENST00000536717 SPICE1Q8N0Z3 855 aa21.3■■□□□ 1
TNFRSF1A-209ENST00000536717 FAM227BQ96M60 508 aa21.3■■□□□ 1
TNFRSF1A-209ENST00000536717 SH2D4AQ9H788 454 aa21.3■■□□□ 1
TNFRSF1A-209ENST00000536717 HELLSQ9NRZ9 838 aa21.3■■□□□ 1
TNFRSF1A-209ENST00000536717 BTBD7Q9P203 1132 aa21.3■■□□□ 1
TNFRSF1A-209ENST00000536717 BIN2Q9UBW5 565 aaPredicted RBP21.3■■□□□ 1
TNFRSF1A-209ENST00000536717 A0A0D9SFI3 127 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 TRIM6-TRIM34B2RNG4 842 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 PRDM1O75626 825 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 UBXN2AP68543 259 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 VPS53Q5VIR6 699 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 TICAM2Q86XR7 235 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 TANGO6Q9C0B7 1094 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 INHAP05111 366 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 CCL5P13501 91 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 MAPK4P31152 587 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 ATP2B2Q01814 1243 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 PPARAQ07869 468 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 COG2Q14746 738 aa21.29■■□□□ 1
TNFRSF1A-209ENST00000536717 WDR46O15213 610 aaKnown RBP21.28■■□□□ 1
TNFRSF1A-209ENST00000536717 GPR142Q7Z601 462 aa21.28■■□□□ 1
TNFRSF1A-209ENST00000536717 RILPL2Q969X0 211 aa21.28■■□□□ 1
TNFRSF1A-209ENST00000536717 IGKV6D-41A0A0C4DH26 115 aa21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 NMIQ13287 307 aaPredicted RBP21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 MCMDC2Q4G0Z9 681 aa21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 ZNF444Q8N0Y2 327 aaPredicted RBP21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 SHISA4Q96DD7 197 aa21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 NUDT12Q9BQG2 462 aa21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 RNF208Q9H0X6 261 aa21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 UNC93B1Q9H1C4 597 aa21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 ZNF287Q9HBT7 754 aa21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 HOXC10Q9NYD6 342 aa21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
TNFRSF1A-209ENST00000536717 CCNA1P78396 465 aa21.26■□□□□ 0.99
TNFRSF1A-209ENST00000536717 ZNF589Q86UQ0 364 aaPredicted RBP21.26■□□□□ 0.99
TNFRSF1A-209ENST00000536717 CCAR1Q8IX12 1150 aaKnown RBP21.26■□□□□ 0.99
TNFRSF1A-209ENST00000536717 SOCS4Q8WXH5 440 aa21.26■□□□□ 0.99
TNFRSF1A-209ENST00000536717 USP6NLQ92738 828 aa21.26■□□□□ 0.99
TNFRSF1A-209ENST00000536717 NYAP2Q9P242 653 aa21.26■□□□□ 0.99
TNFRSF1A-209ENST00000536717 FLOT1O75955 427 aa21.25■□□□□ 0.99
TNFRSF1A-209ENST00000536717 GJB1P08034 283 aa21.25■□□□□ 0.99
TNFRSF1A-209ENST00000536717 CYP2B6P20813 491 aa21.25■□□□□ 0.99
TNFRSF1A-209ENST00000536717 DSG3P32926 999 aa21.25■□□□□ 0.99
TNFRSF1A-209ENST00000536717 PDE4BQ07343 736 aa21.25■□□□□ 0.99
TNFRSF1A-209ENST00000536717 MORN1Q5T089 497 aa21.25■□□□□ 0.99
TNFRSF1A-209ENST00000536717 PLEKHH3Q7Z736 793 aa21.25■□□□□ 0.99
TNFRSF1A-209ENST00000536717 GOPCQ9HD26 462 aa21.25■□□□□ 0.99
TNFRSF1A-209ENST00000536717 PLIN4Q96Q06 1357 aa21.25■□□□□ 0.99
TNFRSF1A-209ENST00000536717 GJA8P48165 433 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 ALX1Q15699 326 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 TRIB2Q92519 343 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 CEP95Q96GE4 821 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 HMGCRP04035 888 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 SLC3A2P08195 630 aaKnown RBP21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 SDSP20132 328 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 PDE4AP27815 886 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 CTDSPL2Q05D32 466 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 NEDD1Q8NHV4 660 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 ATG4CQ96DT6 458 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 FBXO28Q9NVF7 368 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 TACC3Q9Y6A5 838 aa21.24■□□□□ 0.99
TNFRSF1A-209ENST00000536717 ZNF236Q9UL36 1845 aa21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 HSPD1P10809 573 aaKnown RBP21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 XRCC5P13010 732 aaKnown RBP21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 TRIM32Q13049 653 aa21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 FAM47AQ5JRC9 791 aa21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 MOV10L1Q9BXT6 1211 aaKnown RBP21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 INCENPQ9NQS7 918 aa21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 PAK6Q9NQU5 681 aaPredicted RBP21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 MTMR4Q9NYA4 1195 aa21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 CLIP2Q9UDT6 1046 aa21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 ANAPC4Q9UJX5 808 aa21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 LAMA4Q16363 1823 aa21.23■□□□□ 0.99
TNFRSF1A-209ENST00000536717 CCDC171Q6TFL3 1326 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms