RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 PLEKHA8P1O95397 391 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 SAFBQ15424 915 aaKnown RBP eCLIP11.05□□□□□ -0.64
RTL1-201ENST00000534062 PRKG1Q13976 671 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 DHX37Q8IY37 1157 aaKnown RBP11.05□□□□□ -0.64
RTL1-201ENST00000534062 DRC7Q8IY82 874 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 VPS33BQ9H267 617 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 CPVLQ9H3G5 476 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 LAMA4Q16363 1823 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 WNT10BO00744 389 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 CALM1P0DP23 149 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 CALM2P0DP24 149 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 CALM3P0DP25 149 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 SEC23AQ15436 765 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 BICD2Q8TD16 824 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 TMEM47Q9BQJ4 181 aa11.05□□□□□ -0.64
RTL1-201ENST00000534062 ZNF541Q9H0D2 1346 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 EGFRP00533 1210 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
RTL1-201ENST00000534062 TNNI2P48788 182 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 IRX3P78415 501 aaPredicted RBP11.04□□□□□ -0.64
RTL1-201ENST00000534062 CCDC178Q5BJE1 867 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 PRAMEF18Q5VWM3 479 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 ZNF771Q7L3S4 317 aaPredicted RBP11.04□□□□□ -0.64
RTL1-201ENST00000534062 RASGRP2Q7LDG7 609 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 IL17RBQ9NRM6 502 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 FRMPD2Q68DX3 1309 aaPredicted RBP11.04□□□□□ -0.64
RTL1-201ENST00000534062 U2AF2P26368 475 aaKnown RBP eCLIP11.04□□□□□ -0.64
RTL1-201ENST00000534062 KRT85P78386 507 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 ZYXQ15942 572 aaKnown RBP11.04□□□□□ -0.64
RTL1-201ENST00000534062 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 SWAP70Q9UH65 585 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 KCNJ14Q9UNX9 436 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 DDNO94850 711 aaPredicted RBP11.04□□□□□ -0.64
RTL1-201ENST00000534062 XBP1P17861 261 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 KLHL40Q2TBA0 621 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 KIF4BQ2VIQ3 1234 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 USP17L2Q6R6M4 530 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 LTBP1Q14766 1721 aa11.04□□□□□ -0.64
RTL1-201ENST00000534062 ZNF445P59923 1031 aa11.03□□□□□ -0.64
RTL1-201ENST00000534062 SMARCC2Q8TAQ2 1214 aa11.03□□□□□ -0.64
RTL1-201ENST00000534062 WASF1Q92558 559 aa11.03□□□□□ -0.64
RTL1-201ENST00000534062 FDPSP14324 419 aaKnown RBP11.03□□□□□ -0.64
RTL1-201ENST00000534062 RASA3Q14644 834 aa11.03□□□□□ -0.64
RTL1-201ENST00000534062 ABCB5Q2M3G0 1257 aa11.03□□□□□ -0.64
RTL1-201ENST00000534062 SHROOM1Q2M3G4 852 aaPredicted RBP11.03□□□□□ -0.64
RTL1-201ENST00000534062 NEDD1Q8NHV4 660 aa11.03□□□□□ -0.64
RTL1-201ENST00000534062 GOLGA6L6A8MZA4 724 aa11.03□□□□□ -0.64
RTL1-201ENST00000534062 PARP1P09874 1014 aaKnown RBP11.03□□□□□ -0.64
RTL1-201ENST00000534062 GTF2F1P35269 517 aaKnown RBP eCLIP11.03□□□□□ -0.64
RTL1-201ENST00000534062 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
RTL1-201ENST00000534062 DGKHQ86XP1 1220 aa11.03□□□□□ -0.64
RTL1-201ENST00000534062 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
RTL1-201ENST00000534062 DDAH1O94760 285 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 GH2P01242 217 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 GUCY1A2P33402 732 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 PRELPP51888 382 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 EVCP57679 992 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 SEPT2Q15019 361 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 STAG2Q8N3U4 1231 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 GMLQ99445 158 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 MRIQ9BWK5 157 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 IDI2Q9BXS1 227 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 UBA5Q9GZZ9 404 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 RBM28Q9NW13 759 aaKnown RBP11.02□□□□□ -0.64
RTL1-201ENST00000534062 VPS54Q9P1Q0 977 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 MAST2Q6P0Q8 1798 aa11.02□□□□□ -0.64
RTL1-201ENST00000534062 ASTN2O75129 1339 aaPredicted RBP11.02□□□□□ -0.64
RTL1-201ENST00000534062 TOP1P11387 765 aaKnown RBP11.02□□□□□ -0.65
RTL1-201ENST00000534062 ICA1Q05084 483 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 KRT40Q6A162 431 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 FOXP4Q8IVH2 680 aaPredicted RBP11.02□□□□□ -0.65
RTL1-201ENST00000534062 FBXL16Q8N461 479 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
RTL1-201ENST00000534062 ENTPD3O75355 529 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 SHMT1P34896 483 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 TNFAIP1Q13829 316 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 ZSCAN23Q3MJ62 389 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 SH3BP5LQ7L8J4 393 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 SPATA32Q96LK8 384 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 COL4A5P29400 1685 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 DEXIO95424 95 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.65
RTL1-201ENST00000534062 IFNAR1P17181 557 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 TROAPQ12815 778 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 RCSD1Q6JBY9 416 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 CAVIN1Q6NZI2 390 aaKnown RBP11.02□□□□□ -0.65
RTL1-201ENST00000534062 HEATR3Q7Z4Q2 680 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 USP48Q86UV5 1035 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 FEZ1Q99689 392 aa11.02□□□□□ -0.65
RTL1-201ENST00000534062 ADAMTSL1Q8N6G6 1762 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 KLRF2D3W0D1 207 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 TTLL1O95922 423 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 FGRP09769 529 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 RPS12P25398 132 aaKnown RBP11.01□□□□□ -0.65
RTL1-201ENST00000534062 EPS15P42566 896 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 ANGEL2Q5VTE6 544 aaKnown RBP11.01□□□□□ -0.65
RTL1-201ENST00000534062 SPICE1Q8N0Z3 855 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 MTA3Q9BTC8 594 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms