RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 KANSL2Q9H9L4 492 aa22.48■■□□□ 1.19
PCNX3-203ENST00000530174 MKNK2Q9HBH9 465 aa22.48■■□□□ 1.19
PCNX3-203ENST00000530174 GJD2Q9UKL4 321 aa22.48■■□□□ 1.19
PCNX3-203ENST00000530174 RABGAP1Q9Y3P9 1069 aa22.48■■□□□ 1.19
PCNX3-203ENST00000530174 GREB1LQ9C091 1923 aaPredicted RBP22.48■■□□□ 1.19
PCNX3-203ENST00000530174 SPDYE16A6NNV3 312 aaPredicted RBP22.47■■□□□ 1.19
PCNX3-203ENST00000530174 EEF2P13639 858 aaKnown RBP22.47■■□□□ 1.19
PCNX3-203ENST00000530174 ATP2B2Q01814 1243 aa22.47■■□□□ 1.19
PCNX3-203ENST00000530174 LBX2Q6XYB7 198 aa22.47■■□□□ 1.19
PCNX3-203ENST00000530174 PLEKHM2Q8IWE5 1019 aa22.47■■□□□ 1.19
PCNX3-203ENST00000530174 LPAR1Q92633 364 aa22.47■■□□□ 1.19
PCNX3-203ENST00000530174 TANGO6Q9C0B7 1094 aa22.47■■□□□ 1.19
PCNX3-203ENST00000530174 NAPBQ9H115 298 aa22.47■■□□□ 1.19
PCNX3-203ENST00000530174 VCPKMTQ9H867 229 aa22.47■■□□□ 1.19
PCNX3-203ENST00000530174 PLXNB2O15031 1838 aa22.47■■□□□ 1.19
PCNX3-203ENST00000530174 FOXP2O15409 715 aa22.46■■□□□ 1.19
PCNX3-203ENST00000530174 CCL5P13501 91 aa22.46■■□□□ 1.19
PCNX3-203ENST00000530174 MAPK4P31152 587 aa22.46■■□□□ 1.19
PCNX3-203ENST00000530174 SPICE1Q8N0Z3 855 aa22.46■■□□□ 1.19
PCNX3-203ENST00000530174 TRIM6-TRIM34B2RNG4 842 aa22.45■■□□□ 1.18
PCNX3-203ENST00000530174 PRDM1O75626 825 aa22.45■■□□□ 1.18
PCNX3-203ENST00000530174 INHAP05111 366 aa22.45■■□□□ 1.18
PCNX3-203ENST00000530174 CCAR1Q8IX12 1150 aaKnown RBP22.45■■□□□ 1.18
PCNX3-203ENST00000530174 OSBPL3Q9H4L5 887 aa22.45■■□□□ 1.18
PCNX3-203ENST00000530174 HELLSQ9NRZ9 838 aa22.45■■□□□ 1.18
PCNX3-203ENST00000530174 BTBD7Q9P203 1132 aa22.45■■□□□ 1.18
PCNX3-203ENST00000530174 A0A0D9SFI3 127 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 PPARAQ07869 468 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 RLFQ13129 1914 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 COG2Q14746 738 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 VPS53Q5VIR6 699 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 GPR142Q7Z601 462 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 SOCS4Q8WXH5 440 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 RILPL2Q969X0 211 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 FAM227BQ96M60 508 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 RNF208Q9H0X6 261 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 UNC93B1Q9H1C4 597 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 ZNF287Q9HBT7 754 aa22.44■■□□□ 1.18
PCNX3-203ENST00000530174 WDR46O15213 610 aaKnown RBP22.43■■□□□ 1.18
PCNX3-203ENST00000530174 CCNA1P78396 465 aa22.43■■□□□ 1.18
PCNX3-203ENST00000530174 TICAM2Q86XR7 235 aa22.43■■□□□ 1.18
PCNX3-203ENST00000530174 ZNF444Q8N0Y2 327 aaPredicted RBP22.43■■□□□ 1.18
PCNX3-203ENST00000530174 NUDT12Q9BQG2 462 aa22.43■■□□□ 1.18
PCNX3-203ENST00000530174 HOXC10Q9NYD6 342 aa22.43■■□□□ 1.18
PCNX3-203ENST00000530174 GJB1P08034 283 aa22.42■■□□□ 1.18
PCNX3-203ENST00000530174 PLEKHH3Q7Z736 793 aa22.42■■□□□ 1.18
PCNX3-203ENST00000530174 SHISA4Q96DD7 197 aa22.42■■□□□ 1.18
PCNX3-203ENST00000530174 CWC22Q9HCG8 908 aaKnown RBP22.42■■□□□ 1.18
PCNX3-203ENST00000530174 GOPCQ9HD26 462 aa22.42■■□□□ 1.18
PCNX3-203ENST00000530174 A0A0G2JMZ2 1700 aa22.42■■□□□ 1.18
PCNX3-203ENST00000530174 IGKV6D-41A0A0C4DH26 115 aa22.41■■□□□ 1.18
PCNX3-203ENST00000530174 FLOT1O75955 427 aa22.41■■□□□ 1.18
PCNX3-203ENST00000530174 SLC3A2P08195 630 aaKnown RBP22.41■■□□□ 1.18
PCNX3-203ENST00000530174 CYP2B6P20813 491 aa22.41■■□□□ 1.18
PCNX3-203ENST00000530174 DSG3P32926 999 aa22.41■■□□□ 1.18
PCNX3-203ENST00000530174 PDE4BQ07343 736 aa22.41■■□□□ 1.18
PCNX3-203ENST00000530174 NMIQ13287 307 aaPredicted RBP22.41■■□□□ 1.18
PCNX3-203ENST00000530174 MCMDC2Q4G0Z9 681 aa22.41■■□□□ 1.18
PCNX3-203ENST00000530174 NYAP2Q9P242 653 aa22.41■■□□□ 1.18
PCNX3-203ENST00000530174 PARP14Q460N5 1801 aa22.41■■□□□ 1.18
PCNX3-203ENST00000530174 RAD21O60216 631 aa22.4■■□□□ 1.18
PCNX3-203ENST00000530174 HMGCRP04035 888 aa22.4■■□□□ 1.18
PCNX3-203ENST00000530174 GJA8P48165 433 aa22.4■■□□□ 1.18
PCNX3-203ENST00000530174 MORN1Q5T089 497 aa22.4■■□□□ 1.18
PCNX3-203ENST00000530174 WDR78Q5VTH9 848 aa22.4■■□□□ 1.18
PCNX3-203ENST00000530174 NKX2-3Q8TAU0 364 aa22.4■■□□□ 1.18
PCNX3-203ENST00000530174 TRIB2Q92519 343 aa22.4■■□□□ 1.18
PCNX3-203ENST00000530174 USP6NLQ92738 828 aa22.4■■□□□ 1.18
PCNX3-203ENST00000530174 MKI67P46013 3256 aaKnown RBP22.4■■□□□ 1.18
PCNX3-203ENST00000530174 XRCC5P13010 732 aaKnown RBP22.39■■□□□ 1.17
PCNX3-203ENST00000530174 SAMD1Q6SPF0 538 aaPredicted RBP22.39■■□□□ 1.17
PCNX3-203ENST00000530174 ZNF589Q86UQ0 364 aaPredicted RBP22.39■■□□□ 1.17
PCNX3-203ENST00000530174 MB21D1Q8N884 522 aa22.39■■□□□ 1.17
PCNX3-203ENST00000530174 ATG4CQ96DT6 458 aa22.39■■□□□ 1.17
PCNX3-203ENST00000530174 CEP95Q96GE4 821 aa22.39■■□□□ 1.17
PCNX3-203ENST00000530174 PLIN4Q96Q06 1357 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 TSPY3P0CV98 308 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 TSPY8P0CW00 308 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 SDSP20132 328 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 RGS2P41220 211 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 CTDSPL2Q05D32 466 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 TRIM32Q13049 653 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 ALX1Q15699 326 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 FAM47AQ5JRC9 791 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 FAM83BQ5T0W9 1011 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 U2AF1L4Q8WU68 220 aaKnown RBP22.38■■□□□ 1.17
PCNX3-203ENST00000530174 MOV10L1Q9BXT6 1211 aaKnown RBP22.38■■□□□ 1.17
PCNX3-203ENST00000530174 SPATC1LQ9H0A9 340 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 FBXO28Q9NVF7 368 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 CLIP2Q9UDT6 1046 aa22.38■■□□□ 1.17
PCNX3-203ENST00000530174 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.38■■□□□ 1.17
PCNX3-203ENST00000530174 MYH4Q9Y623 1939 aa22.37■■□□□ 1.17
PCNX3-203ENST00000530174 CCDC171Q6TFL3 1326 aa22.37■■□□□ 1.17
PCNX3-203ENST00000530174 NEDD1Q8NHV4 660 aa22.37■■□□□ 1.17
PCNX3-203ENST00000530174 APBA2Q99767 749 aa22.37■■□□□ 1.17
PCNX3-203ENST00000530174 PAK6Q9NQU5 681 aaPredicted RBP22.37■■□□□ 1.17
PCNX3-203ENST00000530174 MTMR4Q9NYA4 1195 aa22.37■■□□□ 1.17
PCNX3-203ENST00000530174 SLC15A5A6NIM6 579 aa22.36■■□□□ 1.17
PCNX3-203ENST00000530174 F5H6K3 240 aa22.36■■□□□ 1.17
PCNX3-203ENST00000530174 NDUFB10O96000 172 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms