RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	TRIM6-TRIM34	B2RNG4	842 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	PRDM1	O75626	825 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	ELN	P15502	786 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	MTFR1	Q15390	333 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	SPICE1	Q8N0Z3	855 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	RILPL2	Q969X0	211 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	PORCN	Q9H237	461 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	SH2D4A	Q9H788	454 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	GJD2	Q9UKL4	321 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	RABGAP1	Q9Y3P9	1069 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	MYH7	P12883	1935 aa		14.03	□□□□□ -0.16
PSMC3-205	ENST00000528362	IGKV6D-41	A0A0C4DH26	115 aa		14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	ADCY3	O60266	1144 aa		14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	EN2	P19622	333 aa	Predicted RBP	14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	PDE4A	P27815	886 aa		14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	ATP2B2	Q01814	1243 aa		14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	PPARA	Q07869	468 aa		14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	NMI	Q13287	307 aa	Predicted RBP	14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	MCMDC2	Q4G0Z9	681 aa		14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	ZNF589	Q86UQ0	364 aa	Predicted RBP	14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	PXYLP1	Q8TE99	480 aa		14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	TMEM106C	Q9BVX2	250 aa		14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	TANGO6	Q9C0B7	1094 aa		14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	BTBD7	Q9P203	1132 aa		14.02	□□□□□ -0.17
PSMC3-205	ENST00000528362	PDE4DIP	Q5VU43	2346 aa		14.01	□□□□□ -0.17
PSMC3-205	ENST00000528362	INHA	P05111	366 aa		14.01	□□□□□ -0.17
PSMC3-205	ENST00000528362	SDS	P20132	328 aa		14.01	□□□□□ -0.17
PSMC3-205	ENST00000528362	MAPK4	P31152	587 aa		14.01	□□□□□ -0.17
PSMC3-205	ENST00000528362	ZNF287	Q9HBT7	754 aa		14.01	□□□□□ -0.17
PSMC3-205	ENST00000528362	BIN2	Q9UBW5	565 aa	Predicted RBP	14.01	□□□□□ -0.17
PSMC3-205	ENST00000528362	BAZ2A	Q9UIF9	1905 aa	Known RBP	14.01	□□□□□ -0.17
PSMC3-205	ENST00000528362	PLIN4	Q96Q06	1357 aa		14	□□□□□ -0.17
PSMC3-205	ENST00000528362	WDR46	O15213	610 aa	Known RBP	14	□□□□□ -0.17
PSMC3-205	ENST00000528362	CCL5	P13501	91 aa		14	□□□□□ -0.17
PSMC3-205	ENST00000528362	UBXN2A	P68543	259 aa		14	□□□□□ -0.17
PSMC3-205	ENST00000528362	COG2	Q14746	738 aa		14	□□□□□ -0.17
PSMC3-205	ENST00000528362	ALX1	Q15699	326 aa		14	□□□□□ -0.17
PSMC3-205	ENST00000528362	GPR142	Q7Z601	462 aa		14	□□□□□ -0.17
PSMC3-205	ENST00000528362	SOCS4	Q8WXH5	440 aa		14	□□□□□ -0.17
PSMC3-205	ENST00000528362	HOXC10	Q9NYD6	342 aa		14	□□□□□ -0.17
PSMC3-205	ENST00000528362	NYAP2	Q9P242	653 aa		14	□□□□□ -0.17
PSMC3-205	ENST00000528362	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	14	□□□□□ -0.17
PSMC3-205	ENST00000528362	TACC3	Q9Y6A5	838 aa		14	□□□□□ -0.17
PSMC3-205	ENST00000528362	CCDC171	Q6TFL3	1326 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	FLOT1	O75955	427 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	SLC3A2	P08195	630 aa	Known RBP	13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	DSG3	P32926	999 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	CCNA1	P78396	465 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	CTDSPL2	Q05D32	466 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	PDE4B	Q07343	736 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	FAM47A	Q5JRC9	791 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	MORN1	Q5T089	497 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	PLEKHH3	Q7Z736	793 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	NEDD1	Q8NHV4	660 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	USP6NL	Q92738	828 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	SHISA4	Q96DD7	197 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	ATG4C	Q96DT6	458 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	CEP95	Q96GE4	821 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	UNC93B1	Q9H1C4	597 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	GOPC	Q9HD26	462 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	INCENP	Q9NQS7	918 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	MTMR4	Q9NYA4	1195 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	ANAPC4	Q9UJX5	808 aa		13.99	□□□□□ -0.17
PSMC3-205	ENST00000528362	RAD21	O60216	631 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	NDUFB10	O96000	172 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	FGA	P02671	866 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	HSPD1	P10809	573 aa	Known RBP	13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	GSPT1	P15170	499 aa	Known RBP	13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	CYP2B6	P20813	491 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	TFAP4	Q01664	338 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	FAM83B	Q5T0W9	1011 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	CCAR1	Q8IX12	1150 aa	Known RBP	13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	TRIB2	Q92519	343 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	NUDT12	Q9BQG2	462 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	RNF208	Q9H0X6	261 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	FBXO28	Q9NVF7	368 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	CLIP2	Q9UDT6	1046 aa		13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	KIAA0100	Q14667	2235 aa	Known RBP	13.98	□□□□□ -0.17
PSMC3-205	ENST00000528362	ZMYM6	O95789	1325 aa		13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	HMGCR	P04035	888 aa		13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	GJB1	P08034	283 aa		13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	TSPY3	P0CV98	308 aa		13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	TSPY8	P0CW00	308 aa		13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	XRCC5	P13010	732 aa	Known RBP	13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	TRIM32	Q13049	653 aa		13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	TTC22	Q5TAA0	569 aa		13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	LRRC47	Q8N1G4	583 aa	Known RBP	13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	MB21D1	Q8N884	522 aa		13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	NUP88	Q99567	741 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	SPATC1L	Q9H0A9	340 aa		13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362	DIAPH3	Q9NSV4	1193 aa		13.97	□□□□□ -0.17
PSMC3-205	ENST00000528362		F5H6K3	240 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	ORC4	O43929	436 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	TTLL1	O95922	423 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	FGR	P09769	529 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	PTPRE	P23469	700 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	GJA8	P48165	433 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms