RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-210ENST00000527699 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-210ENST00000527699 C19orf81C9J6K1 198 aa12.07□□□□□ -0.48
CAPN1-210ENST00000527699 CCER2I3L3R5 266 aa12.07□□□□□ -0.48
CAPN1-210ENST00000527699 CNMDO75829 334 aa12.07□□□□□ -0.48
CAPN1-210ENST00000527699 ZKSCAN1P17029 563 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-210ENST00000527699 HOXA7P31268 230 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-210ENST00000527699 CCDC129Q6ZRS4 1044 aa12.07□□□□□ -0.48
CAPN1-210ENST00000527699 PLEKHH3Q7Z736 793 aa12.07□□□□□ -0.48
CAPN1-210ENST00000527699 AACSQ86V21 672 aa12.07□□□□□ -0.48
CAPN1-210ENST00000527699 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
CAPN1-210ENST00000527699 GPR108Q9NPR9 543 aa12.07□□□□□ -0.48
CAPN1-210ENST00000527699 CNGA1P29973 690 aa12.06□□□□□ -0.48
CAPN1-210ENST00000527699 PLCD1P51178 756 aa12.06□□□□□ -0.48
CAPN1-210ENST00000527699 HNRNPUQ00839 825 aaKnown RBP eCLIP12.06□□□□□ -0.48
CAPN1-210ENST00000527699 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
CAPN1-210ENST00000527699 SLFNL1Q499Z3 407 aa12.06□□□□□ -0.48
CAPN1-210ENST00000527699 FLRT1Q9NZU1 646 aa12.06□□□□□ -0.48
CAPN1-210ENST00000527699 CDK5RAP2Q96SN8 1893 aa12.06□□□□□ -0.48
CAPN1-210ENST00000527699 PRR33A8MZF0 331 aa12.05□□□□□ -0.48
CAPN1-210ENST00000527699 MPHOSPH10O00566 681 aaKnown RBP12.05□□□□□ -0.48
CAPN1-210ENST00000527699 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-210ENST00000527699 POLR3DP05423 398 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-210ENST00000527699 CYP2D6P10635 497 aa12.05□□□□□ -0.48
CAPN1-210ENST00000527699 MAPK4P31152 587 aa12.05□□□□□ -0.48
CAPN1-210ENST00000527699 RGS2P41220 211 aa12.05□□□□□ -0.48
CAPN1-210ENST00000527699 ABCB5Q2M3G0 1257 aa12.05□□□□□ -0.48
CAPN1-210ENST00000527699 CERKLQ49MI3 558 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-210ENST00000527699 ANO1Q5XXA6 986 aa12.05□□□□□ -0.48
CAPN1-210ENST00000527699 PANK1Q8TE04 598 aa12.05□□□□□ -0.48
CAPN1-210ENST00000527699 KHSRPQ92945 711 aaKnown RBP eCLIP12.05□□□□□ -0.48
CAPN1-210ENST00000527699 FBXL18Q96ME1 805 aa12.05□□□□□ -0.48
CAPN1-210ENST00000527699 DNAJC2Q99543 621 aaKnown RBP12.05□□□□□ -0.48
CAPN1-210ENST00000527699 BTBD7Q9P203 1132 aa12.05□□□□□ -0.48
CAPN1-210ENST00000527699 USP17L15C9J2P7 530 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 USP17L13C9JLJ4 530 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 USP17L11C9JVI0 530 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 USP17L18D6R9N7 530 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 USP17L22D6RA61 530 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 USP17L17D6RBQ6 530 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 USP17L19D6RCP7 530 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 USP17L20D6RJB6 530 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 ST18O60284 1047 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 USP17L24Q0WX57 530 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 ADGRE1Q14246 886 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 SEPT2Q15019 361 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 MORN1Q5T089 497 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 MAP3K21Q5TCX8 1036 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 CEP85Q6P2H3 762 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 METTL16Q86W50 562 aaKnown RBP12.04□□□□□ -0.48
CAPN1-210ENST00000527699 CLEC10AQ8IUN9 316 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 NPLOC4Q8TAT6 608 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 SOCS4Q8WXH5 440 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 EDC3Q96F86 508 aaKnown RBP12.04□□□□□ -0.48
CAPN1-210ENST00000527699 RPAP3Q9H6T3 665 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-210ENST00000527699 SERPINB13Q9UIV8 391 aa12.04□□□□□ -0.48
CAPN1-210ENST00000527699 NOP58Q9Y2X3 529 aaKnown RBP12.04□□□□□ -0.48
CAPN1-210ENST00000527699 MAGEB6P1A0A0J9YX57 407 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 VCAM1P19320 739 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 CYP2C19P33261 490 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 GUCY1A2P33402 732 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 MAP2K5Q13163 448 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 LHX8Q68G74 356 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 TATDN1Q6P1N9 297 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 CATSPERGQ6ZRH7 1159 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 SLC44A5Q8NCS7 719 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 SDR42E1Q8WUS8 393 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 USP6NLQ92738 828 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 DYNLL2Q96FJ2 89 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 ZNF512BQ96KM6 892 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-210ENST00000527699 APBA2Q99767 749 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 CABP5Q9NP86 173 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 PLXNA1Q9UIW2 1896 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 CACNA1BQ00975 2339 aa12.03□□□□□ -0.48
CAPN1-210ENST00000527699 MYH1P12882 1939 aa12.02□□□□□ -0.49
CAPN1-210ENST00000527699 SHMT1P34896 483 aa12.02□□□□□ -0.49
CAPN1-210ENST00000527699 ATP2B2Q01814 1243 aa12.02□□□□□ -0.49
CAPN1-210ENST00000527699 MFSD14CQ5VZR4 134 aa12.02□□□□□ -0.49
CAPN1-210ENST00000527699 TTC6Q86TZ1 520 aa12.02□□□□□ -0.49
CAPN1-210ENST00000527699 RABGAP1Q9Y3P9 1069 aa12.02□□□□□ -0.49
CAPN1-210ENST00000527699 FRMPD3Q5JV73 1810 aa12.02□□□□□ -0.49
CAPN1-210ENST00000527699 FOCADQ5VW36 1801 aa12.02□□□□□ -0.49
CAPN1-210ENST00000527699 CYP2D7A0A087X1C5 515 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 A0A1W2PRG0 241 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 SPDYE16A6NNV3 312 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-210ENST00000527699 GOLIM4O00461 696 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 PRKAB2O43741 272 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 CHGBP05060 677 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 XRCC5P13010 732 aaKnown RBP12.01□□□□□ -0.49
CAPN1-210ENST00000527699 PTPREP23469 700 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 PLS1Q14651 629 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 KIAA1755Q5JYT7 1200 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 PRAMEF19Q5SWL8 479 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 GJC2Q5T442 439 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-210ENST00000527699 SLC9C2Q5TAH2 1124 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 SH3RF1Q7Z6J0 888 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 MIER1Q8N108 512 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 LCORLQ8N3X6 602 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 TRPV1Q8NER1 839 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 RIOK1Q9BRS2 568 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms