RNA–Protein interactions for RNA: ENST00000527691.5

GPATCH4-213, Transcript of G-patch domain containing 4, humanhuman

TSL 4

Gene GPATCH4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-213ENST00000527691 NYAP2Q9P242 653 aa13.88□□□□□ -0.19
GPATCH4-213ENST00000527691 SYNPO2Q9UMS6 1093 aa13.88□□□□□ -0.19
GPATCH4-213ENST00000527691 V9GY48 417 aaPredicted RBP13.88□□□□□ -0.19
GPATCH4-213ENST00000527691 WNT10BO00744 389 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 GADD45BO75293 160 aaPredicted RBP13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 PARP1P09874 1014 aaKnown RBP13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 TNNI2P48788 182 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 FOSBP53539 338 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 MAP3K10Q02779 954 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 TNFAIP1Q13829 316 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 PFKFB3Q16875 520 aaPredicted RBP13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 ASPRV1Q53RT3 343 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 MYSM1Q5VVJ2 828 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 TMEM179Q6ZVK1 233 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 CMTR1Q8N1G2 835 aaKnown RBP13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 SYAP1Q96A49 352 aaPredicted RBP13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 CSRNP1Q96S65 589 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 FHDC1Q9C0D6 1143 aaPredicted RBP13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 KANSL2Q9H9L4 492 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 POLR3EQ9NVU0 708 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 RTEL1Q9NZ71 1219 aa13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 ISY1Q9ULR0 285 aaKnown RBP13.87□□□□□ -0.19
GPATCH4-213ENST00000527691 KIF28PB7ZC32 967 aa13.86□□□□□ -0.19
GPATCH4-213ENST00000527691 TCP10L2B9ZVM9 353 aa13.86□□□□□ -0.19
GPATCH4-213ENST00000527691 YEATS4O95619 227 aa13.86□□□□□ -0.19
GPATCH4-213ENST00000527691 SCG2P13521 617 aa13.86□□□□□ -0.19
GPATCH4-213ENST00000527691 NASPP49321 788 aaPredicted RBP13.86□□□□□ -0.19
GPATCH4-213ENST00000527691 CCDC82Q8N4S0 544 aa13.86□□□□□ -0.19
GPATCH4-213ENST00000527691 PHF20Q9BVI0 1012 aa13.86□□□□□ -0.19
GPATCH4-213ENST00000527691 GJB4Q9NTQ9 266 aa13.86□□□□□ -0.19
GPATCH4-213ENST00000527691 TFIP11Q9UBB9 837 aaKnown RBP13.86□□□□□ -0.19
GPATCH4-213ENST00000527691 PGAP2Q9UHJ9 254 aa13.86□□□□□ -0.19
GPATCH4-213ENST00000527691 SBF1O95248 1867 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 CLRN2A0PK11 232 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 UBE2Q2LH0YL09 131 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 PDHBP11177 359 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 GMPSP49915 693 aaPredicted RBP13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 GNL2Q13823 731 aaKnown RBP13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 NOSTRINQ8IVI9 506 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 DIS3L2Q8IYB7 885 aaKnown RBP13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 STAG2Q8N3U4 1231 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 USP28Q96RU2 1077 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 SYT17Q9BSW7 474 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 BRMS1Q9HCU9 246 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 CLIP2Q9UDT6 1046 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 CNOT7Q9UIV1 285 aaKnown RBP13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 MORC2Q9Y6X9 1032 aaPredicted RBP13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 MYH4Q9Y623 1939 aa13.85□□□□□ -0.19
GPATCH4-213ENST00000527691 KLRF2D3W0D1 207 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 hCG_1984214I3L0E3 225 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 MPHOSPH10O00566 681 aaKnown RBP13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 CALML3P27482 149 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 ZNF445P59923 1031 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 ABCB5Q2M3G0 1257 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 NBPF9Q3BBW0 867 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 RBM26Q5T8P6 1007 aaKnown RBP13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 GALNT17Q6IS24 598 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 ARHGAP27Q6ZUM4 889 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 ZNF713Q8N859 430 aaPredicted RBP13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 KCNG4Q8TDN1 519 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 RIOX1Q9H6W3 641 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 VEZTQ9HBM0 779 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 CABP5Q9NP86 173 aa13.84□□□□□ -0.19
GPATCH4-213ENST00000527691 GOLGA6L4A6NEF3 574 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 BTBD18B2RXH4 712 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 CYTH3O43739 400 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 KRT2P35908 639 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 RILPL1Q5EBL4 403 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 ANO1Q5XXA6 986 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 CAVIN1Q6NZI2 390 aaKnown RBP13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 MICALL2Q8IY33 904 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 GPC2Q8N158 579 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 LINC00301Q8NCQ3 95 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 CCDC148Q8NFR7 591 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 DCAF4Q8WV16 495 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 GINM1Q9NU53 330 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 VPS54Q9P1Q0 977 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 KCNJ14Q9UNX9 436 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 ZNF541Q9H0D2 1346 aa13.83□□□□□ -0.2
GPATCH4-213ENST00000527691 USP17L5A8MUK1 530 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 H7C1D1 291 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 LETM1O95202 739 aaPredicted RBP13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 ICA1Q05084 483 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 ZNF543Q08ER8 600 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 SLC39A14Q15043 492 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 SLC35G1Q2M3R5 365 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 USP17L2Q6R6M4 530 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 LRRC47Q8N1G4 583 aaKnown RBP13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 DAGLBQ8NCG7 672 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 GMCL1P1Q8NEA9 526 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 CCDC12Q8WUD4 166 aaPredicted RBP13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 SHISA4Q96DD7 197 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 PGBD1Q96JS3 809 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 TMEM63CQ9P1W3 806 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 GJA3Q9Y6H8 435 aa13.82□□□□□ -0.2
GPATCH4-213ENST00000527691 A0A1W2PQ27 194 aa13.81□□□□□ -0.2
GPATCH4-213ENST00000527691 A0A1W2PQ64 194 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms