RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 VPS53Q5VIR6 699 aa16.05■□□□□ 0.16
USH1C-203ENST00000526181 PLEKHM2Q8IWE5 1019 aa16.05■□□□□ 0.16
USH1C-203ENST00000526181 PXYLP1Q8TE99 480 aa16.05■□□□□ 0.16
USH1C-203ENST00000526181 GTF3C2Q8WUA4 911 aaPredicted RBP16.05■□□□□ 0.16
USH1C-203ENST00000526181 FAM227BQ96M60 508 aa16.05■□□□□ 0.16
USH1C-203ENST00000526181 UNC93B1Q9H1C4 597 aa16.05■□□□□ 0.16
USH1C-203ENST00000526181 VCPKMTQ9H867 229 aa16.05■□□□□ 0.16
USH1C-203ENST00000526181 MKNK2Q9HBH9 465 aa16.05■□□□□ 0.16
USH1C-203ENST00000526181 RABGAP1Q9Y3P9 1069 aa16.05■□□□□ 0.16
USH1C-203ENST00000526181 PLXNB2O15031 1838 aa16.05■□□□□ 0.16
USH1C-203ENST00000526181 GREB1LQ9C091 1923 aaPredicted RBP16.04■□□□□ 0.16
USH1C-203ENST00000526181 TNRC18O15417 2968 aaPredicted RBP16.04■□□□□ 0.16
USH1C-203ENST00000526181 A0A0D9SFI3 127 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 TRIM6-TRIM34B2RNG4 842 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 UBXN2AP68543 259 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 GPR142Q7Z601 462 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 RILPL2Q969X0 211 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 SHISA4Q96DD7 197 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 NACAP1Q9BZK3 213 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 RNF208Q9H0X6 261 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 NAPBQ9H115 298 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 SH2D4AQ9H788 454 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 KANSL2Q9H9L4 492 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 CENPFP49454 3210 aa16.04■□□□□ 0.16
USH1C-203ENST00000526181 A0A0G2JMZ2 1700 aa16.03■□□□□ 0.16
USH1C-203ENST00000526181 CYP2B6P20813 491 aa16.03■□□□□ 0.16
USH1C-203ENST00000526181 MAPK4P31152 587 aa16.03■□□□□ 0.16
USH1C-203ENST00000526181 PPARAQ07869 468 aa16.03■□□□□ 0.16
USH1C-203ENST00000526181 TRIM32Q13049 653 aa16.03■□□□□ 0.16
USH1C-203ENST00000526181 LBX2Q6XYB7 198 aa16.03■□□□□ 0.16
USH1C-203ENST00000526181 LPAR1Q92633 364 aa16.03■□□□□ 0.16
USH1C-203ENST00000526181 RAD21O60216 631 aa16.02■□□□□ 0.16
USH1C-203ENST00000526181 NMIQ13287 307 aaPredicted RBP16.02■□□□□ 0.16
USH1C-203ENST00000526181 COG2Q14746 738 aa16.02■□□□□ 0.16
USH1C-203ENST00000526181 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
USH1C-203ENST00000526181 PLEKHH3Q7Z736 793 aa16.02■□□□□ 0.16
USH1C-203ENST00000526181 CCAR1Q8IX12 1150 aaKnown RBP16.02■□□□□ 0.16
USH1C-203ENST00000526181 TRIB2Q92519 343 aa16.02■□□□□ 0.16
USH1C-203ENST00000526181 OSBPL3Q9H4L5 887 aa16.02■□□□□ 0.16
USH1C-203ENST00000526181 HELLSQ9NRZ9 838 aa16.02■□□□□ 0.16
USH1C-203ENST00000526181 IGKV6D-41A0A0C4DH26 115 aa16.01■□□□□ 0.15
USH1C-203ENST00000526181 WDR46O15213 610 aaKnown RBP16.01■□□□□ 0.15
USH1C-203ENST00000526181 FLOT1O75955 427 aa16.01■□□□□ 0.15
USH1C-203ENST00000526181 CTDSPL2Q05D32 466 aa16.01■□□□□ 0.15
USH1C-203ENST00000526181 FAM47AQ5JRC9 791 aa16.01■□□□□ 0.15
USH1C-203ENST00000526181 MORN1Q5T089 497 aa16.01■□□□□ 0.15
USH1C-203ENST00000526181 WDR78Q5VTH9 848 aa16.01■□□□□ 0.15
USH1C-203ENST00000526181 ZNF589Q86UQ0 364 aaPredicted RBP16.01■□□□□ 0.15
USH1C-203ENST00000526181 ATG4CQ96DT6 458 aa16.01■□□□□ 0.15
USH1C-203ENST00000526181 NUDT12Q9BQG2 462 aa16.01■□□□□ 0.15
USH1C-203ENST00000526181 INCENPQ9NQS7 918 aa16.01■□□□□ 0.15
USH1C-203ENST00000526181 TACC3Q9Y6A5 838 aa16.01■□□□□ 0.15
USH1C-203ENST00000526181 HMGCRP04035 888 aa16■□□□□ 0.15
USH1C-203ENST00000526181 GJB1P08034 283 aa16■□□□□ 0.15
USH1C-203ENST00000526181 PDE4AP27815 886 aa16■□□□□ 0.15
USH1C-203ENST00000526181 DSG3P32926 999 aa16■□□□□ 0.15
USH1C-203ENST00000526181 GJA8P48165 433 aa16■□□□□ 0.15
USH1C-203ENST00000526181 CCNA1P78396 465 aa16■□□□□ 0.15
USH1C-203ENST00000526181 CCL14Q16627 93 aa16■□□□□ 0.15
USH1C-203ENST00000526181 MCMDC2Q4G0Z9 681 aa16■□□□□ 0.15
USH1C-203ENST00000526181 FAM83BQ5T0W9 1011 aa16■□□□□ 0.15
USH1C-203ENST00000526181 ZNF444Q8N0Y2 327 aaPredicted RBP16■□□□□ 0.15
USH1C-203ENST00000526181 U2AF1L4Q8WU68 220 aaKnown RBP16■□□□□ 0.15
USH1C-203ENST00000526181 SOCS4Q8WXH5 440 aa16■□□□□ 0.15
USH1C-203ENST00000526181 USP6NLQ92738 828 aa16■□□□□ 0.15
USH1C-203ENST00000526181 CEP95Q96GE4 821 aa16■□□□□ 0.15
USH1C-203ENST00000526181 NUP88Q99567 741 aaPredicted RBP16■□□□□ 0.15
USH1C-203ENST00000526181 CWC22Q9HCG8 908 aaKnown RBP16■□□□□ 0.15
USH1C-203ENST00000526181 GOPCQ9HD26 462 aa16■□□□□ 0.15
USH1C-203ENST00000526181 FBXO28Q9NVF7 368 aa16■□□□□ 0.15
USH1C-203ENST00000526181 HOXC10Q9NYD6 342 aa16■□□□□ 0.15
USH1C-203ENST00000526181 NYAP2Q9P242 653 aa16■□□□□ 0.15
USH1C-203ENST00000526181 CLIP2Q9UDT6 1046 aa16■□□□□ 0.15
USH1C-203ENST00000526181 BRCA2P51587 3418 aa16■□□□□ 0.15
USH1C-203ENST00000526181 RLFQ13129 1914 aa16■□□□□ 0.15
USH1C-203ENST00000526181 SDSP20132 328 aa15.99■□□□□ 0.15
USH1C-203ENST00000526181 PDE4BQ07343 736 aa15.99■□□□□ 0.15
USH1C-203ENST00000526181 MOV10L1Q9BXT6 1211 aaKnown RBP15.99■□□□□ 0.15
USH1C-203ENST00000526181 ZNF287Q9HBT7 754 aa15.99■□□□□ 0.15
USH1C-203ENST00000526181 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.99■□□□□ 0.15
USH1C-203ENST00000526181 PLIN4Q96Q06 1357 aa15.99■□□□□ 0.15
USH1C-203ENST00000526181 NDUFB10O96000 172 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 SLC3A2P08195 630 aaKnown RBP15.98■□□□□ 0.15
USH1C-203ENST00000526181 TSPY3P0CV98 308 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 TSPY8P0CW00 308 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 PTPREP23469 700 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 RGS2P41220 211 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 TFAP4Q01664 338 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 LRRC47Q8N1G4 583 aaKnown RBP15.98■□□□□ 0.15
USH1C-203ENST00000526181 NKX2-3Q8TAU0 364 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 DEFB118Q96PH6 123 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 APBA2Q99767 749 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 SPATC1LQ9H0A9 340 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.98■□□□□ 0.15
USH1C-203ENST00000526181 PAK6Q9NQU5 681 aaPredicted RBP15.98■□□□□ 0.15
USH1C-203ENST00000526181 MTMR4Q9NYA4 1195 aa15.98■□□□□ 0.15
USH1C-203ENST00000526181 CCDC171Q6TFL3 1326 aa15.97■□□□□ 0.15
USH1C-203ENST00000526181 F5H6K3 240 aa15.97■□□□□ 0.15
USH1C-203ENST00000526181 SGPL1O95470 568 aa15.97■□□□□ 0.15
USH1C-203ENST00000526181 HSPD1P10809 573 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms