RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 HELLSQ9NRZ9 838 aa10.04□□□□□ -0.8
VPS13B-210ENST00000521932 MAST2Q6P0Q8 1798 aa10.03□□□□□ -0.8
VPS13B-210ENST00000521932 CLRN2A0PK11 232 aa10.03□□□□□ -0.8
VPS13B-210ENST00000521932 WDHD1O75717 1129 aaPredicted RBP10.03□□□□□ -0.8
VPS13B-210ENST00000521932 DYNLL1P63167 89 aaKnown RBP10.03□□□□□ -0.8
VPS13B-210ENST00000521932 TNFAIP1Q13829 316 aa10.03□□□□□ -0.8
VPS13B-210ENST00000521932 APOBEC3FQ8IUX4 373 aaKnown RBP10.03□□□□□ -0.8
VPS13B-210ENST00000521932 SH3RF3Q8TEJ3 882 aaPredicted RBP10.03□□□□□ -0.8
VPS13B-210ENST00000521932 STRBPQ96SI9 672 aaKnown RBP10.03□□□□□ -0.8
VPS13B-210ENST00000521932 GGA3Q9NZ52 723 aa10.03□□□□□ -0.8
VPS13B-210ENST00000521932 ENTPD3O75355 529 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 CHMLP26374 656 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 TNNI2P48788 182 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 NFIAQ12857 509 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 MCMDC2Q4G0Z9 681 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 MAP1SQ66K74 1059 aaPredicted RBP10.02□□□□□ -0.81
VPS13B-210ENST00000521932 KRT26Q7Z3Y9 468 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 SH3RF1Q7Z6J0 888 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 SMC1BQ8NDV3 1235 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 FAM151AQ8WW52 585 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 AIDAQ96BJ3 306 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 FAM227BQ96M60 508 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 SEC62Q99442 399 aaKnown RBP10.02□□□□□ -0.81
VPS13B-210ENST00000521932 DEFB129Q9H1M3 183 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 TMOD2Q9NZR1 351 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 MKRN1Q9UHC7 482 aaKnown RBP10.02□□□□□ -0.81
VPS13B-210ENST00000521932 PPP2R3BQ9Y5P8 575 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 WASF2Q9Y6W5 498 aa10.02□□□□□ -0.81
VPS13B-210ENST00000521932 CNTNAP1P78357 1384 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 ECM29Q5VYK3 1845 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 A0A0D9SFI3 127 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 TCP10L2B9ZVM9 353 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 MBD4O95243 580 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 GNAT2P19087 354 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 CACNB3P54284 484 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 FSTL1Q12841 308 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 NMIQ13287 307 aaPredicted RBP10.01□□□□□ -0.81
VPS13B-210ENST00000521932 RASA3Q14644 834 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 CWC27Q6UX04 472 aaKnown RBP10.01□□□□□ -0.81
VPS13B-210ENST00000521932 SH3BP5LQ7L8J4 393 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 USP48Q86UV5 1035 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 TEX11Q8IYF3 940 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 LCORLQ8N3X6 602 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 TGFBRAP1Q8WUH2 860 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 ARMT1Q9H993 441 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 VEZTQ9HBM0 779 aa10.01□□□□□ -0.81
VPS13B-210ENST00000521932 DDX4Q9NQI0 724 aaKnown RBP10.01□□□□□ -0.81
VPS13B-210ENST00000521932 MYH7P12883 1935 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 PATL2C9JE40 543 aaKnown RBP10□□□□□ -0.81
VPS13B-210ENST00000521932 M0R2C6 588 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 GPAA1O43292 621 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 GIMAP6Q6P9H5 292 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 ZFPM1Q8IX07 1006 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 TEPSINQ96N21 525 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 CDK15Q96Q40 435 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 C1QTNF2Q9BXJ5 285 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 GLIS2Q9BZE0 524 aaPredicted RBP10□□□□□ -0.81
VPS13B-210ENST00000521932 CRNKL1Q9BZJ0 848 aaKnown RBP10□□□□□ -0.81
VPS13B-210ENST00000521932 TMEM39BQ9GZU3 492 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 OSBPL5Q9H0X9 879 aaPredicted RBP10□□□□□ -0.81
VPS13B-210ENST00000521932 DHX36Q9H2U1 1008 aaKnown RBP10□□□□□ -0.81
VPS13B-210ENST00000521932 DCP1AQ9NPI6 582 aaPredicted RBP10□□□□□ -0.81
VPS13B-210ENST00000521932 DIAPH3Q9NSV4 1193 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 ATP8A2Q9NTI2 1148 aa10□□□□□ -0.81
VPS13B-210ENST00000521932 SCAF8Q9UPN6 1271 aaKnown RBP10□□□□□ -0.81
VPS13B-210ENST00000521932 RPAP1Q9BWH6 1393 aaPredicted RBP10□□□□□ -0.81
VPS13B-210ENST00000521932 GSG1L2A8MUP6 293 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 PRKAB2O43741 272 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 BMP1P13497 986 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 SNRPBP14678 240 aaKnown RBP9.99□□□□□ -0.81
VPS13B-210ENST00000521932 MFAP1P55081 439 aaKnown RBP9.99□□□□□ -0.81
VPS13B-210ENST00000521932 MAP3K10Q02779 954 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 NNTQ13423 1086 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 ZNF589Q86UQ0 364 aaPredicted RBP9.99□□□□□ -0.81
VPS13B-210ENST00000521932 FAM174AQ8TBP5 190 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 EPS8L1Q8TE68 723 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 SDR42E1Q8WUS8 393 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 RUFY2Q8WXA3 655 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 HMX1Q9NP08 348 aaPredicted RBP9.99□□□□□ -0.81
VPS13B-210ENST00000521932 SLC4A4Q9Y6R1 1079 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 FLT1P17948 1338 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 RAD50Q92878 1312 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 PASKQ96RG2 1323 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 ATRNL1Q5VV63 1379 aa9.99□□□□□ -0.81
VPS13B-210ENST00000521932 COL2A1P02458 1487 aaPredicted RBP9.98□□□□□ -0.81
VPS13B-210ENST00000521932 POLR2AP24928 1970 aaKnown RBP9.98□□□□□ -0.81
VPS13B-210ENST00000521932 DDTLA6NHG4 134 aaPredicted RBP9.98□□□□□ -0.81
VPS13B-210ENST00000521932 ADM5C9JUS6 153 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 TRAF5O00463 557 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 FOXP2O15409 715 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 SGSM2O43147 1006 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 AP1G2O75843 785 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 USP5P45974 858 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 TCP10Q12799 353 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 PICALMQ13492 652 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 NR6A1Q15406 480 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 SUPT20HL1Q3ZLR7 823 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 NBPF12Q5TAG4 269 aaPredicted RBP9.98□□□□□ -0.81
VPS13B-210ENST00000521932 DLK2Q6UY11 383 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 TRIM46Q7Z4K8 759 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms