RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 FAM110CQ1W6H9 321 aa21.55■■□□□ 1.04
VEGFA-222ENST00000520948 SHROOM1Q2M3G4 852 aaPredicted RBP21.55■■□□□ 1.04
VEGFA-222ENST00000520948 LSG1Q9H089 658 aaKnown RBP21.55■■□□□ 1.04
VEGFA-222ENST00000520948 MYH8P13535 1937 aa21.55■■□□□ 1.04
VEGFA-222ENST00000520948 GDF11O95390 407 aa21.54■■□□□ 1.04
VEGFA-222ENST00000520948 TFRCP02786 760 aaKnown RBP21.54■■□□□ 1.04
VEGFA-222ENST00000520948 CTDSPL2Q05D32 466 aa21.54■■□□□ 1.04
VEGFA-222ENST00000520948 CASC1Q6TDU7 716 aa21.54■■□□□ 1.04
VEGFA-222ENST00000520948 CCDC17Q96LX7 622 aa21.54■■□□□ 1.04
VEGFA-222ENST00000520948 NBPF3Q9H094 633 aa21.54■■□□□ 1.04
VEGFA-222ENST00000520948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.54■■□□□ 1.042e-6■□□□□ 9
VEGFA-222ENST00000520948 USP17L5A8MUK1 530 aa21.53■■□□□ 1.04
VEGFA-222ENST00000520948 ASNSP08243 561 aa21.53■■□□□ 1.04
VEGFA-222ENST00000520948 RASA1P20936 1047 aa21.53■■□□□ 1.04
VEGFA-222ENST00000520948 GUCY1A2P33402 732 aa21.53■■□□□ 1.04
VEGFA-222ENST00000520948 ASCC2Q9H1I8 757 aaPredicted RBP21.53■■□□□ 1.04
VEGFA-222ENST00000520948 CTNNA3Q9UI47 895 aa21.53■■□□□ 1.04
VEGFA-222ENST00000520948 ZBTB21Q9ULJ3 1066 aa21.53■■□□□ 1.04
VEGFA-222ENST00000520948 ALPK3Q96L96 1907 aa21.53■■□□□ 1.04
VEGFA-222ENST00000520948 LAMA4Q16363 1823 aa21.52■■□□□ 1.04
VEGFA-222ENST00000520948 GCLCP48506 637 aaPredicted RBP21.52■■□□□ 1.04
VEGFA-222ENST00000520948 PABPC4Q13310 644 aaKnown RBP eCLIP21.52■■□□□ 1.046e-13■■■■■ 112.3
VEGFA-222ENST00000520948 MTMR2Q13614 643 aa21.52■■□□□ 1.04
VEGFA-222ENST00000520948 ABCB5Q2M3G0 1257 aa21.52■■□□□ 1.04
VEGFA-222ENST00000520948 AS3MTQ9HBK9 375 aa21.52■■□□□ 1.04
VEGFA-222ENST00000520948 INCENPQ9NQS7 918 aa21.52■■□□□ 1.04
VEGFA-222ENST00000520948 PAK6Q9NQU5 681 aaPredicted RBP21.52■■□□□ 1.04
VEGFA-222ENST00000520948 NR2E3Q9Y5X4 410 aa21.52■■□□□ 1.04
VEGFA-222ENST00000520948 PLXNB2O15031 1838 aa21.52■■□□□ 1.04
VEGFA-222ENST00000520948 GREB1LQ9C091 1923 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-222ENST00000520948 ZNF213O14771 459 aa21.51■■□□□ 1.03
VEGFA-222ENST00000520948 GH2P01242 217 aa21.51■■□□□ 1.03
VEGFA-222ENST00000520948 SLC3A2P08195 630 aaKnown RBP21.51■■□□□ 1.03
VEGFA-222ENST00000520948 AKR1B1P15121 316 aa21.51■■□□□ 1.03
VEGFA-222ENST00000520948 PDE4BQ07343 736 aa21.51■■□□□ 1.03
VEGFA-222ENST00000520948 STK11IPQ8N1F8 1099 aa21.51■■□□□ 1.03
VEGFA-222ENST00000520948 TBC1D2Q9BYX2 928 aa21.51■■□□□ 1.03
VEGFA-222ENST00000520948 ZNF287Q9HBT7 754 aa21.51■■□□□ 1.03
VEGFA-222ENST00000520948 U3KPZ7 1027 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-222ENST00000520948 ORC4O43929 436 aa21.5■■□□□ 1.03
VEGFA-222ENST00000520948 PEX10O60683 326 aa21.5■■□□□ 1.03
VEGFA-222ENST00000520948 HAND2P61296 217 aa21.5■■□□□ 1.03
VEGFA-222ENST00000520948 SH3D19Q5HYK7 790 aa21.5■■□□□ 1.03
VEGFA-222ENST00000520948 KIAA1211Q6ZU35 1233 aa21.5■■□□□ 1.03
VEGFA-222ENST00000520948 WDR18Q9BV38 432 aa21.5■■□□□ 1.03
VEGFA-222ENST00000520948 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.5■■□□□ 1.03
VEGFA-222ENST00000520948 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.5■■□□□ 1.033e-7■■■■□ 25.9
VEGFA-222ENST00000520948 MKNK2Q9HBH9 465 aa21.5■■□□□ 1.03
VEGFA-222ENST00000520948 CABP5Q9NP86 173 aa21.5■■□□□ 1.03
VEGFA-222ENST00000520948 EVI5O60447 810 aa21.49■■□□□ 1.03
VEGFA-222ENST00000520948 PRDM1O75626 825 aa21.49■■□□□ 1.03
VEGFA-222ENST00000520948 TRIM32Q13049 653 aa21.49■■□□□ 1.03
VEGFA-222ENST00000520948 IMMTQ16891 758 aaKnown RBP21.49■■□□□ 1.03
VEGFA-222ENST00000520948 AKNAD1Q5T1N1 836 aa21.49■■□□□ 1.03
VEGFA-222ENST00000520948 TBC1D10CQ8IV04 446 aa21.49■■□□□ 1.03
VEGFA-222ENST00000520948 DIS3LQ8TF46 1054 aaKnown RBP21.49■■□□□ 1.03
VEGFA-222ENST00000520948 STAG1Q8WVM7 1258 aa21.49■■□□□ 1.03
VEGFA-222ENST00000520948 PAWRQ96IZ0 340 aaKnown RBP21.49■■□□□ 1.03
VEGFA-222ENST00000520948 RBM8AQ9Y5S9 174 aaKnown RBP21.49■■□□□ 1.03
VEGFA-222ENST00000520948 SZT2Q5T011 3432 aa21.48■■□□□ 1.03
VEGFA-222ENST00000520948 CYP21A2P08686 494 aa21.48■■□□□ 1.03
VEGFA-222ENST00000520948 PCP11498 1178 aaKnown RBP21.48■■□□□ 1.03
VEGFA-222ENST00000520948 IRX3P78415 501 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-222ENST00000520948 SEPT2Q15019 361 aa21.48■■□□□ 1.03
VEGFA-222ENST00000520948 NECTIN1Q15223 517 aa21.48■■□□□ 1.03
VEGFA-222ENST00000520948 TMEM179Q6ZVK1 233 aa21.48■■□□□ 1.03
VEGFA-222ENST00000520948 SIAH1Q8IUQ4 282 aa21.48■■□□□ 1.03
VEGFA-222ENST00000520948 ZNF444Q8N0Y2 327 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-222ENST00000520948 CRISPLD2Q9H0B8 497 aa21.48■■□□□ 1.03
VEGFA-222ENST00000520948 PRO3102Q9H379 93 aa21.48■■□□□ 1.03
VEGFA-222ENST00000520948 ANO2Q9NQ90 1003 aa21.48■■□□□ 1.03
VEGFA-222ENST00000520948 IGKV6D-41A0A0C4DH26 115 aa21.47■■□□□ 1.03
VEGFA-222ENST00000520948 HMGCRP04035 888 aa21.47■■□□□ 1.03
VEGFA-222ENST00000520948 BACE1P56817 501 aa21.47■■□□□ 1.03
VEGFA-222ENST00000520948 TMOD4Q9NZQ9 345 aa21.47■■□□□ 1.03
VEGFA-222ENST00000520948 GJD2Q9UKL4 321 aa21.47■■□□□ 1.03
VEGFA-222ENST00000520948 RANBP2P49792 3224 aaKnown RBP21.47■■□□□ 1.03
VEGFA-222ENST00000520948 MPHOSPH10O00566 681 aaKnown RBP21.46■■□□□ 1.03
VEGFA-222ENST00000520948 MFSD6Q6ZSS7 791 aa21.46■■□□□ 1.03
VEGFA-222ENST00000520948 NEDD1Q8NHV4 660 aa21.46■■□□□ 1.03
VEGFA-222ENST00000520948 MORF4L1Q9UBU8 362 aa21.46■■□□□ 1.03
VEGFA-222ENST00000520948 RAB3GAP1Q15042 981 aa21.45■■□□□ 1.02
VEGFA-222ENST00000520948 P2RX7Q99572 595 aaKnown RBP21.45■■□□□ 1.02
VEGFA-222ENST00000520948 RNF41Q9H4P4 317 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-222ENST00000520948 TXNRD2Q9NNW7 524 aa21.45■■□□□ 1.02
VEGFA-222ENST00000520948 PLIN4Q96Q06 1357 aa21.45■■□□□ 1.02
VEGFA-222ENST00000520948 EPB41L2O43491 1005 aaKnown RBP21.44■■□□□ 1.02
VEGFA-222ENST00000520948 CYP2B6P20813 491 aa21.44■■□□□ 1.02
VEGFA-222ENST00000520948 HERVK_113P62684 666 aa21.44■■□□□ 1.02
VEGFA-222ENST00000520948 TFAP4Q01664 338 aa21.44■■□□□ 1.02
VEGFA-222ENST00000520948 FAM47AQ5JRC9 791 aa21.44■■□□□ 1.02
VEGFA-222ENST00000520948 NECAB2Q7Z6G3 386 aa21.44■■□□□ 1.02
VEGFA-222ENST00000520948 TRIB2Q92519 343 aa21.44■■□□□ 1.02
VEGFA-222ENST00000520948 KANSL2Q9H9L4 492 aa21.44■■□□□ 1.02
VEGFA-222ENST00000520948 HMX1Q9NP08 348 aaPredicted RBP21.44■■□□□ 1.02
VEGFA-222ENST00000520948 TAF6LQ9Y6J9 622 aa21.44■■□□□ 1.02
VEGFA-222ENST00000520948 A0A1W2PRG0 241 aa21.43■■□□□ 1.02
VEGFA-222ENST00000520948 C19orf81C9J6K1 198 aa21.43■■□□□ 1.02
VEGFA-222ENST00000520948 USP17L10C9JJH3 530 aa21.43■■□□□ 1.02
VEGFA-222ENST00000520948 NT5C2P49902 561 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms