RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 ZNF236Q9UL36 1845 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 TNPO2O14787 897 aaKnown RBP10.54□□□□□ -0.72
PABPC1-213ENST00000519848 MAP4K4O95819 1239 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-213ENST00000519848 GNRH1P01148 92 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 GJB1P08034 283 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 PRMT2P55345 433 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 HERVK_113P62684 666 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 IRF5Q13568 498 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 USP6NLQ92738 828 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 DNAJC2Q99543 621 aaKnown RBP10.54□□□□□ -0.72
PABPC1-213ENST00000519848 RNF208Q9H0X6 261 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 ARMT1Q9H993 441 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 FLRT1Q9NZU1 646 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 RCAN3Q9UKA8 241 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
PABPC1-213ENST00000519848 VCAM1P19320 739 aa10.53□□□□□ -0.72
PABPC1-213ENST00000519848 HOXA7P31268 230 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-213ENST00000519848 SEPT2Q15019 361 aa10.53□□□□□ -0.72
PABPC1-213ENST00000519848 OTUD7AQ8TE49 926 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-213ENST00000519848 C12orf42Q96LP6 360 aa10.53□□□□□ -0.72
PABPC1-213ENST00000519848 DEFB118Q96PH6 123 aa10.53□□□□□ -0.72
PABPC1-213ENST00000519848 ZBED2Q9BTP6 218 aa10.53□□□□□ -0.72
PABPC1-213ENST00000519848 CRISPLD2Q9H0B8 497 aa10.53□□□□□ -0.72
PABPC1-213ENST00000519848 EHD4Q9H223 541 aa10.53□□□□□ -0.72
PABPC1-213ENST00000519848 DHX36Q9H2U1 1008 aaKnown RBP10.53□□□□□ -0.72
PABPC1-213ENST00000519848 BOLA2Q9H3K6 86 aa10.53□□□□□ -0.72
PABPC1-213ENST00000519848 DCP1AQ9NPI6 582 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-213ENST00000519848 BTBD7Q9P203 1132 aa10.53□□□□□ -0.72
PABPC1-213ENST00000519848 SZT2Q5T011 3432 aa10.52□□□□□ -0.72
PABPC1-213ENST00000519848 GOLGA8CPA6NN73 597 aa10.52□□□□□ -0.73
PABPC1-213ENST00000519848 BAG3O95817 575 aa10.52□□□□□ -0.73
PABPC1-213ENST00000519848 ASNSP08243 561 aa10.52□□□□□ -0.73
PABPC1-213ENST00000519848 ADD2P35612 726 aa10.52□□□□□ -0.73
PABPC1-213ENST00000519848 MAP3K21Q5TCX8 1036 aa10.52□□□□□ -0.73
PABPC1-213ENST00000519848 NBPF11Q86T75 865 aa10.52□□□□□ -0.73
PABPC1-213ENST00000519848 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
PABPC1-213ENST00000519848 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.52□□□□□ -0.73
PABPC1-213ENST00000519848 PFASO15067 1338 aa10.52□□□□□ -0.73
PABPC1-213ENST00000519848 LTBP2Q14767 1821 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 MAGEB6P1A0A0J9YX57 407 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 SPDYE16A6NNV3 312 aaPredicted RBP10.51□□□□□ -0.73
PABPC1-213ENST00000519848 USP17L10C9JJH3 530 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 SOX1O00570 391 aaPredicted RBP10.51□□□□□ -0.73
PABPC1-213ENST00000519848 FARP2O94887 1054 aaPredicted RBP10.51□□□□□ -0.73
PABPC1-213ENST00000519848 MBD4O95243 580 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 SGPL1O95470 568 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 IGHA2P01877 340 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 AKR1B1P15121 316 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 USP5P45974 858 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 MORN1Q5T089 497 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 SLC9C2Q5TAH2 1124 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 FOXP4Q8IVH2 680 aaPredicted RBP10.51□□□□□ -0.73
PABPC1-213ENST00000519848 CRACR2BQ8N4Y2 399 aaPredicted RBP10.51□□□□□ -0.73
PABPC1-213ENST00000519848 KIF1BPQ96EK5 621 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.51□□□□□ -0.73
PABPC1-213ENST00000519848 PUS7LQ9H0K6 701 aaKnown RBP10.51□□□□□ -0.73
PABPC1-213ENST00000519848 RBM27Q9P2N5 1060 aaKnown RBP10.51□□□□□ -0.73
PABPC1-213ENST00000519848 SERPINB13Q9UIV8 391 aa10.51□□□□□ -0.73
PABPC1-213ENST00000519848 TRIOBPQ9H2D6 2365 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 FOXP2O15409 715 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 CYP2B6P20813 491 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 CCND3P30281 292 aaPredicted RBP10.5□□□□□ -0.73
PABPC1-213ENST00000519848 ERVK-9P63128 1117 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 ERVK-24P63145 666 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 DSG2Q14126 1118 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 ERC1Q8IUD2 1116 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 RPAP2Q8IXW5 612 aaPredicted RBP10.5□□□□□ -0.73
PABPC1-213ENST00000519848 TRPV1Q8NER1 839 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 NPLOC4Q8TAT6 608 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.5□□□□□ -0.73
PABPC1-213ENST00000519848 HAUS7Q99871 368 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 NOL10Q9BSC4 688 aaKnown RBP10.5□□□□□ -0.73
PABPC1-213ENST00000519848 KIAA1683Q9H0B3 1180 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 EPB41L4AQ9HCS5 686 aaPredicted RBP10.5□□□□□ -0.73
PABPC1-213ENST00000519848 PAG1Q9NWQ8 432 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 BIN2Q9UBW5 565 aaPredicted RBP10.5□□□□□ -0.73
PABPC1-213ENST00000519848 DDX19BQ9UMR2 479 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 PCDHB15Q9Y5E8 787 aa10.5□□□□□ -0.73
PABPC1-213ENST00000519848 HLA-DOAP06340 250 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 ATP5JP18859 108 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 GCLCP48506 637 aaPredicted RBP10.49□□□□□ -0.73
PABPC1-213ENST00000519848 IRX3P78415 501 aaPredicted RBP10.49□□□□□ -0.73
PABPC1-213ENST00000519848 MAP3K12Q12852 859 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 RAB3GAP1Q15042 981 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 ARHGEF6Q15052 776 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 ABCB5Q2M3G0 1257 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 GPR142Q7Z601 462 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 ZNF454Q8N9F8 522 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 PAWRQ96IZ0 340 aaKnown RBP10.49□□□□□ -0.73
PABPC1-213ENST00000519848 AS3MTQ9HBK9 375 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 GPHNQ9NQX3 736 aaPredicted RBP10.49□□□□□ -0.73
PABPC1-213ENST00000519848 MCM9Q9NXL9 1143 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 PNMA3Q9UL41 463 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 TACC3Q9Y6A5 838 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 CEP290O15078 2479 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 LAMA3Q16787 3333 aa10.49□□□□□ -0.73
PABPC1-213ENST00000519848 LRRC37A2A6NM11 1700 aa10.48□□□□□ -0.73
PABPC1-213ENST00000519848 M0R2C6 588 aa10.48□□□□□ -0.73
PABPC1-213ENST00000519848 HMGCRP04035 888 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms