RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 CCDC57Q2TAC2 916 aa12.78□□□□□ -0.36
SPIDR-211ENST00000519401 TSHZ1Q6ZSZ6 1077 aa12.78□□□□□ -0.36
SPIDR-211ENST00000519401 GALNT15Q8N3T1 639 aa12.78□□□□□ -0.36
SPIDR-211ENST00000519401 AENQ8WTP8 325 aaKnown RBP12.78□□□□□ -0.36
SPIDR-211ENST00000519401 NUP133Q8WUM0 1156 aa12.78□□□□□ -0.36
SPIDR-211ENST00000519401 NSMCE1Q8WV22 266 aa12.78□□□□□ -0.36
SPIDR-211ENST00000519401 CUL5Q93034 780 aa12.78□□□□□ -0.36
SPIDR-211ENST00000519401 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
SPIDR-211ENST00000519401 PAPOLBQ9NRJ5 636 aaKnown RBP12.78□□□□□ -0.36
SPIDR-211ENST00000519401 TNS1Q9HBL0 1735 aaKnown RBP12.78□□□□□ -0.36
SPIDR-211ENST00000519401 NCAPD2Q15021 1401 aa12.78□□□□□ -0.36
SPIDR-211ENST00000519401 A0A087WWV3 80 aa12.77□□□□□ -0.36
SPIDR-211ENST00000519401 PPP1R12BO60237 982 aaPredicted RBP12.77□□□□□ -0.36
SPIDR-211ENST00000519401 PYGLP06737 847 aa12.77□□□□□ -0.36
SPIDR-211ENST00000519401 FECHP22830 423 aa12.77□□□□□ -0.36
SPIDR-211ENST00000519401 RPS6KB1P23443 525 aa12.77□□□□□ -0.36
SPIDR-211ENST00000519401 SFSWAPQ12872 951 aaKnown RBP12.77□□□□□ -0.36
SPIDR-211ENST00000519401 E2F5Q15329 346 aa12.77□□□□□ -0.36
SPIDR-211ENST00000519401 THEMIS2Q5TEJ8 643 aa12.77□□□□□ -0.36
SPIDR-211ENST00000519401 CCDC181Q5TID7 509 aa12.77□□□□□ -0.36
SPIDR-211ENST00000519401 ARMC9Q7Z3E5 817 aa12.77□□□□□ -0.36
SPIDR-211ENST00000519401 ATL2Q8NHH9 583 aa12.77□□□□□ -0.36
SPIDR-211ENST00000519401 GOLGA6L10A6NI86 522 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 BUB1BO60566 1050 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-211ENST00000519401 ATP6V1G2O95670 118 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 RPSAP08865 295 aaKnown RBP12.77□□□□□ -0.37
SPIDR-211ENST00000519401 ME1P48163 572 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 MTX1Q13505 466 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 PTGISQ16647 500 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 BLOC1S2Q6QNY1 142 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 PTF1AQ7RTS3 328 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 MIPOL1Q8TD10 442 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 CNKSR1Q969H4 720 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 EYA1Q99502 592 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 FANCLQ9NW38 375 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 RTEL1Q9NZ71 1219 aa12.77□□□□□ -0.37
SPIDR-211ENST00000519401 PPP1R37O75864 691 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 AKAP17AQ02040 695 aaKnown RBP12.76□□□□□ -0.37
SPIDR-211ENST00000519401 ANKRD20A8PQ5CZ79 823 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 CREB3L3Q68CJ9 461 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 NLRP14Q86W24 1093 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 SLC35F6Q8N357 371 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 TEX9Q8N6V9 391 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 MYCBPAPQ8TBZ2 947 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 CCDC51Q96ER9 411 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 BICD1Q96G01 975 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 NOD2Q9HC29 1040 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 INTS13Q9NVM9 706 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 UBN2Q6ZU65 1347 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 SH3TC1Q8TE82 1336 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 B4DLN1 442 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 TOB2Q14106 344 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-211ENST00000519401 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 IQCEQ6IPM2 695 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 TRAPPC11Q7Z392 1133 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 KCNG4Q8TDN1 519 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 TBC1D5Q92609 795 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 FMNL2Q96PY5 1086 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 USP28Q96RU2 1077 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 CCT8L2Q96SF2 557 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 TSPAN18Q96SJ8 248 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 EPAS1Q99814 870 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 HMG20BQ9P0W2 317 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 ZNF232Q9UNY5 417 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 SPG7Q9UQ90 795 aa12.76□□□□□ -0.37
SPIDR-211ENST00000519401 BCL9O00512 1426 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 TMEM232C9JQI7 657 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 AKR1B15C9JRZ8 316 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-211ENST00000519401 PYGBP11216 843 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 IFT88Q13099 833 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 PDCLQ13371 301 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 NNTQ13423 1086 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 KIAA0753Q2KHM9 967 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 SPECC1Q5M775 1068 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 PPP4R3AQ6IN85 833 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 CCDC70Q6NSX1 233 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 KIRREL3Q8IZU9 778 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 EHBP1Q8NDI1 1231 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 MAP4K1Q92918 833 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 TSC22D3Q99576 134 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 DESI2Q9BSY9 194 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 TSGA10Q9BZW7 698 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 LZTFL1Q9NQ48 299 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
SPIDR-211ENST00000519401 HIP1O00291 1037 aa12.74□□□□□ -0.37
SPIDR-211ENST00000519401 YEATS4O95619 227 aa12.74□□□□□ -0.37
SPIDR-211ENST00000519401 NDUFA8P51970 172 aa12.74□□□□□ -0.37
SPIDR-211ENST00000519401 PTH1RQ03431 593 aa12.74□□□□□ -0.37
SPIDR-211ENST00000519401 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-211ENST00000519401 DDX54Q8TDD1 881 aaKnown RBP12.74□□□□□ -0.37
SPIDR-211ENST00000519401 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
SPIDR-211ENST00000519401 GORASP1Q9BQQ3 440 aa12.74□□□□□ -0.37
SPIDR-211ENST00000519401 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
SPIDR-211ENST00000519401 NOP53Q9NZM5 478 aaKnown RBP12.74□□□□□ -0.37
SPIDR-211ENST00000519401 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
SPIDR-211ENST00000519401 RNF8O76064 485 aa12.74□□□□□ -0.37
SPIDR-211ENST00000519401 LINGO3P0C6S8 592 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms