RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 RIN3Q8TB24 985 aa6.61□□□□□ -1.35
LINC00534-201ENST00000517400 GATA6Q92908 595 aa6.61□□□□□ -1.35
LINC00534-201ENST00000517400 MIPEPQ99797 713 aa6.61□□□□□ -1.35
LINC00534-201ENST00000517400 DUSP23Q9BVJ7 150 aa6.61□□□□□ -1.35
LINC00534-201ENST00000517400 C7orf69Q9H7B7 122 aa6.61□□□□□ -1.35
LINC00534-201ENST00000517400 ZNF214Q9UL59 606 aaPredicted RBP6.61□□□□□ -1.35
LINC00534-201ENST00000517400 MSRB2Q9Y3D2 182 aa6.61□□□□□ -1.35
LINC00534-201ENST00000517400 CLASP1Q7Z460 1538 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 MAGI1Q96QZ7 1491 aaPredicted RBP6.6□□□□□ -1.35
LINC00534-201ENST00000517400 COL17A1Q9UMD9 1497 aaPredicted RBP6.6□□□□□ -1.35
LINC00534-201ENST00000517400 ETV3P41162 512 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 NFE2L2Q16236 605 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 BBS9Q3SYG4 887 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 ZNF746Q6NUN9 644 aaPredicted RBP6.6□□□□□ -1.35
LINC00534-201ENST00000517400 OGFOD3Q6PK18 319 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 ZAR1Q86SH2 424 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 VWCEQ96DN2 955 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 SLC6A18Q96N87 628 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 CCDC113Q9H0I3 377 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 ZSWIM4Q9H7M6 989 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 SUCOQ9UBS9 1254 aaKnown RBP6.6□□□□□ -1.35
LINC00534-201ENST00000517400 CUX1P39880 1505 aa6.6□□□□□ -1.35
LINC00534-201ENST00000517400 K7ELQ4 463 aaPredicted RBP6.59□□□□□ -1.35
LINC00534-201ENST00000517400 CLEC3AO75596 197 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 EOMESO95936 686 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 H2AFB1P0C5Y9 115 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 H2AFB2P0C5Z0 115 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 PMS1P54277 932 aaKnown RBP6.59□□□□□ -1.35
LINC00534-201ENST00000517400 NCAPHQ15003 741 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 NOP9Q86U38 636 aaKnown RBP6.59□□□□□ -1.35
LINC00534-201ENST00000517400 CDH24Q86UP0 819 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 FAM178BQ8IXR5 827 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 TOP6BLQ8N6T0 577 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 MICAL1Q8TDZ2 1067 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 COX4I2Q96KJ9 171 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 TBC1D32Q96NH3 1257 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 ST7Q9NRC1 585 aa6.59□□□□□ -1.35
LINC00534-201ENST00000517400 CDK11AQ9UQ88 783 aaPredicted RBP6.59□□□□□ -1.35
LINC00534-201ENST00000517400 FAM86C2PA6NEL3 165 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 DDAH1O94760 285 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 GJB6O95452 261 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 FAM87AP0C7U9 286 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 ADMP35318 185 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 SLC7A5Q01650 507 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 RNF43Q68DV7 783 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 VHLLQ6RSH7 139 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 C6orf15Q6UXA7 325 aaPredicted RBP6.58□□□□□ -1.36
LINC00534-201ENST00000517400 FAM214BQ7L5A3 538 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 KLHL6Q8WZ60 621 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 SMARCC1Q92922 1105 aaPredicted RBP6.58□□□□□ -1.36
LINC00534-201ENST00000517400 FBXL18Q96ME1 805 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 KREMEN1Q96MU8 473 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 MAPK8IP1Q9UQF2 711 aa6.58□□□□□ -1.36
LINC00534-201ENST00000517400 LEFTY1O75610 366 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 CYP7A1P22680 504 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 CHMP4BP1P59074 171 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 CYP27A1Q02318 531 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 NFIAQ12857 509 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 RASA3Q14644 834 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 GNPTABQ3T906 1256 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 NBPF12Q5TAG4 269 aaPredicted RBP6.57□□□□□ -1.36
LINC00534-201ENST00000517400 RNF141Q8WVD5 230 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 ASPNQ9BXN1 380 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 PIF1Q9H611 641 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 PCDHB10Q9UN67 800 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 PBRM1Q86U86 1689 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 ERCC6L2Q5T890 1561 aa6.57□□□□□ -1.36
LINC00534-201ENST00000517400 LOC105371045A0A1W2PR82 267 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 C9IYK1 514 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 GSC2O15499 205 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 PDPK1O15530 556 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 RNF4P78317 190 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 RASGRF1Q13972 1273 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 DOC2BQ14184 412 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 BMS1Q14692 1282 aaKnown RBP6.56□□□□□ -1.36
LINC00534-201ENST00000517400 CYP27C1Q4G0S4 372 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 ANKRD39Q53RE8 183 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 NKAPLQ5M9Q1 402 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 KIAA1211LQ6NV74 962 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 SLC51AQ86UW1 340 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 PPFIBP1Q86W92 1011 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 DEPDC7Q96QD5 511 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 SRPK1Q96SB4 655 aaKnown RBP6.56□□□□□ -1.36
LINC00534-201ENST00000517400 DBNDD2Q9BQY9 259 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 SNTG2Q9NY99 539 aa6.56□□□□□ -1.36
LINC00534-201ENST00000517400 TPX2Q9ULW0 747 aaKnown RBP6.56□□□□□ -1.36
LINC00534-201ENST00000517400 CNTNAP4Q9C0A0 1308 aa6.55□□□□□ -1.36
LINC00534-201ENST00000517400 FAM221BA6H8Z2 402 aa6.55□□□□□ -1.36
LINC00534-201ENST00000517400 B2RBV5 119 aa6.55□□□□□ -1.36
LINC00534-201ENST00000517400 IGF2BP3O00425 579 aaKnown RBP eCLIP6.55□□□□□ -1.36
LINC00534-201ENST00000517400 ZNF143P52747 638 aaPredicted RBP6.55□□□□□ -1.36
LINC00534-201ENST00000517400 MRM1Q6IN84 353 aaKnown RBP6.55□□□□□ -1.36
LINC00534-201ENST00000517400 SHISA5Q8N114 240 aa6.55□□□□□ -1.36
LINC00534-201ENST00000517400 MRFAP1L1Q96HT8 127 aa6.55□□□□□ -1.36
LINC00534-201ENST00000517400 MFSD14AQ96MC6 490 aa6.55□□□□□ -1.36
LINC00534-201ENST00000517400 HEXIM2Q96MH2 286 aaKnown RBP6.55□□□□□ -1.36
LINC00534-201ENST00000517400 PRDM5Q9NQX1 630 aaPredicted RBP6.55□□□□□ -1.36
LINC00534-201ENST00000517400 GTF2IRD1Q9UHL9 959 aa6.55□□□□□ -1.36
LINC00534-201ENST00000517400 FAM170BA6NMN3 283 aa6.54□□□□□ -1.36
LINC00534-201ENST00000517400 IGLV1-40P01703 118 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms