RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 LHX8Q68G74 356 aa17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 MB21D1Q8N884 522 aa17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 DDRGK1Q96HY6 314 aa17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 TANGO6Q9C0B7 1094 aa17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 ARHGEF10LQ9HCE6 1279 aa17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 HOXC10Q9NYD6 342 aa17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 ZMYND8Q9ULU4 1186 aaPredicted RBP17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 BAZ2AQ9UIF9 1905 aaKnown RBP17.62■□□□□ 0.41
SCARNA20.5-201ENST00000516991 A0A1W2PRG0 241 aa17.61■□□□□ 0.41
SCARNA20.5-201ENST00000516991 ATP2B2Q01814 1243 aa17.61■□□□□ 0.41
SCARNA20.5-201ENST00000516991 SHCBP1Q8NEM2 672 aa17.61■□□□□ 0.41
SCARNA20.5-201ENST00000516991 CCDC17Q96LX7 622 aa17.61■□□□□ 0.41
SCARNA20.5-201ENST00000516991 HAUS7Q99871 368 aa17.61■□□□□ 0.41
SCARNA20.5-201ENST00000516991 BOLA2Q9H3K6 86 aa17.61■□□□□ 0.41
SCARNA20.5-201ENST00000516991 ARMT1Q9H993 441 aa17.61■□□□□ 0.41
SCARNA20.5-201ENST00000516991 RLFQ13129 1914 aa17.6■□□□□ 0.41
SCARNA20.5-201ENST00000516991 STRNO43815 780 aa17.6■□□□□ 0.41
SCARNA20.5-201ENST00000516991 CYP2D6P10635 497 aa17.6■□□□□ 0.41
SCARNA20.5-201ENST00000516991 ICA1Q05084 483 aa17.6■□□□□ 0.41
SCARNA20.5-201ENST00000516991 SLC44A5Q8NCS7 719 aa17.6■□□□□ 0.41
SCARNA20.5-201ENST00000516991 EVX2Q03828 476 aa17.59■□□□□ 0.41
SCARNA20.5-201ENST00000516991 UBE3CQ15386 1083 aa17.59■□□□□ 0.41
SCARNA20.5-201ENST00000516991 ZSCAN25Q6NSZ9 544 aa17.59■□□□□ 0.41
SCARNA20.5-201ENST00000516991 MOV10L1Q9BXT6 1211 aaKnown RBP17.59■□□□□ 0.41
SCARNA20.5-201ENST00000516991 SPATC1LQ9H0A9 340 aa17.59■□□□□ 0.41
SCARNA20.5-201ENST00000516991 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
SCARNA20.5-201ENST00000516991 FLRT1Q9NZU1 646 aa17.59■□□□□ 0.41
SCARNA20.5-201ENST00000516991 DDX20Q9UHI6 824 aaKnown RBP17.59■□□□□ 0.41
SCARNA20.5-201ENST00000516991 RCAN3Q9UKA8 241 aa17.59■□□□□ 0.41
SCARNA20.5-201ENST00000516991 SZT2Q5T011 3432 aa17.59■□□□□ 0.41
SCARNA20.5-201ENST00000516991 SYN1P17600 705 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 MAGEA10P43363 369 aaPredicted RBP17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 C12orf60Q5U649 245 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 OLFML2BQ68BL8 750 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 GPR153Q6NV75 609 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 DPP9Q86TI2 863 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 NPLOC4Q8TAT6 608 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 DYNLL2Q96FJ2 89 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 LRRCC1Q9C099 1032 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 MROH8Q9H579 483 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 VCPKMTQ9H867 229 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 SLC5A4Q9NY91 659 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 TMX2Q9Y320 296 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 PARP14Q460N5 1801 aa17.58■□□□□ 0.4
SCARNA20.5-201ENST00000516991 SOX1O00570 391 aaPredicted RBP17.57■□□□□ 0.4
SCARNA20.5-201ENST00000516991 WDR46O15213 610 aaKnown RBP17.57■□□□□ 0.4
SCARNA20.5-201ENST00000516991 PRKAB2O43741 272 aa17.57■□□□□ 0.4
SCARNA20.5-201ENST00000516991 AKR1B1P15121 316 aa17.57■□□□□ 0.4
SCARNA20.5-201ENST00000516991 ADORA2AP29274 412 aa17.57■□□□□ 0.4
SCARNA20.5-201ENST00000516991 CNGA1P29973 690 aa17.57■□□□□ 0.4
SCARNA20.5-201ENST00000516991 C16orf86Q6ZW13 317 aa17.57■□□□□ 0.4
SCARNA20.5-201ENST00000516991 ABRAQ8N0Z2 381 aa17.57■□□□□ 0.4
SCARNA20.5-201ENST00000516991 DNM1LO00429 736 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 FLOT1O75955 427 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 IGHA2P01877 340 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 CYBAP13498 195 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 ERCC3P19447 782 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 DSG3P32926 999 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 CYP2C19P33261 490 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 CDK8P49336 464 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 LRRC26Q2I0M4 334 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 LRIT3Q3SXY7 679 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 TDHQ8IZJ6 230 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 LRCH3Q96II8 777 aa17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 UBE2OQ9C0C9 1292 aaKnown RBP17.56■□□□□ 0.4
SCARNA20.5-201ENST00000516991 USP17L12C9JPN9 530 aa17.55■□□□□ 0.4
SCARNA20.5-201ENST00000516991 USP17L21D6R901 530 aa17.55■□□□□ 0.4
SCARNA20.5-201ENST00000516991 KIAA1755Q5JYT7 1200 aa17.55■□□□□ 0.4
SCARNA20.5-201ENST00000516991 CLEC10AQ8IUN9 316 aa17.55■□□□□ 0.4
SCARNA20.5-201ENST00000516991 ARPP21Q9UBL0 812 aaPredicted RBP17.55■□□□□ 0.4
SCARNA20.5-201ENST00000516991 SLC4A4Q9Y6R1 1079 aa17.55■□□□□ 0.4
SCARNA20.5-201ENST00000516991 SLC25A27O95847 323 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 PLS1Q14651 629 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 SLFNL1Q499Z3 407 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 NCAPG2Q86XI2 1143 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 SIAH1Q8IUQ4 282 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 SPICE1Q8N0Z3 855 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 ATG4CQ96DT6 458 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 GPATCH3Q96I76 525 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 GOPCQ9HD26 462 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
SCARNA20.5-201ENST00000516991 CYP2D7A0A087X1C5 515 aa17.53■□□□□ 0.4
SCARNA20.5-201ENST00000516991 ARRDC4Q8NCT1 418 aa17.53■□□□□ 0.4
SCARNA20.5-201ENST00000516991 TRPV1Q8NER1 839 aa17.53■□□□□ 0.4
SCARNA20.5-201ENST00000516991 SENP6Q9GZR1 1112 aaPredicted RBP17.53■□□□□ 0.4
SCARNA20.5-201ENST00000516991 ECHDC1Q9NTX5 307 aa17.53■□□□□ 0.4
SCARNA20.5-201ENST00000516991 COL11A1P12107 1806 aaPredicted RBP17.53■□□□□ 0.4
SCARNA20.5-201ENST00000516991 GREB1LQ9C091 1923 aaPredicted RBP17.53■□□□□ 0.4
SCARNA20.5-201ENST00000516991 KBTBD13C9JR72 458 aa17.52■□□□□ 0.4
SCARNA20.5-201ENST00000516991 SEPT4O43236 478 aa17.52■□□□□ 0.4
SCARNA20.5-201ENST00000516991 FCER1AP12319 257 aa17.52■□□□□ 0.4
SCARNA20.5-201ENST00000516991 EEF2P13639 858 aaKnown RBP17.52■□□□□ 0.4
SCARNA20.5-201ENST00000516991 COPB2P35606 906 aa17.52■□□□□ 0.4
SCARNA20.5-201ENST00000516991 GIMAP6Q6P9H5 292 aa17.52■□□□□ 0.4
SCARNA20.5-201ENST00000516991 CTR9Q6PD62 1173 aa17.52■□□□□ 0.4
SCARNA20.5-201ENST00000516991 LBHD1Q9BQE6 289 aaPredicted RBP17.52■□□□□ 0.4
SCARNA20.5-201ENST00000516991 NRBP1Q9UHY1 535 aa17.52■□□□□ 0.4
SCARNA20.5-201ENST00000516991 COBLO75128 1261 aa17.51■□□□□ 0.39
SCARNA20.5-201ENST00000516991 SBK1Q52WX2 424 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms