RNA–Protein interactions for RNA: ENST00000510834.1

BRIX1-203, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 1 (best)

Gene BRIX1, Length 2,380 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-203ENST00000510834 BIN1O00499 593 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 TRAPPC10P48553 1259 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 PLCD1P51178 756 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 TERF1P54274 439 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 PNOCQ13519 176 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 COL23A1Q86Y22 540 aaPredicted RBP11.97□□□□□ -0.49
BRIX1-203ENST00000510834 SLC44A5Q8NCS7 719 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 SH3GLB2Q9NR46 395 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 PLIN4Q96Q06 1357 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 IKBKBO14920 756 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 CALML3P27482 149 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 GRIN1Q05586 938 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 LONRF3Q496Y0 759 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 EARS2Q5JPH6 523 aaKnown RBP11.97□□□□□ -0.49
BRIX1-203ENST00000510834 CCDC186Q7Z3E2 898 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 KIAA1524Q8TCG1 905 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 FERMT2Q96AC1 680 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 PCDH10Q9P2E7 1040 aa11.97□□□□□ -0.49
BRIX1-203ENST00000510834 GREB1LQ9C091 1923 aaPredicted RBP11.97□□□□□ -0.49
BRIX1-203ENST00000510834 USP17L3A6NCW0 530 aa11.96□□□□□ -0.49
BRIX1-203ENST00000510834 USP17L4A6NCW7 530 aa11.96□□□□□ -0.49
BRIX1-203ENST00000510834 SMTNL1A8MU46 457 aa11.96□□□□□ -0.49
BRIX1-203ENST00000510834 ATP2B1P20020 1258 aa11.96□□□□□ -0.49
BRIX1-203ENST00000510834 PDE6BP35913 854 aa11.96□□□□□ -0.49
BRIX1-203ENST00000510834 NLRP5P59047 1200 aa11.96□□□□□ -0.49
BRIX1-203ENST00000510834 NOLC1Q14978 699 aaKnown RBP eCLIP11.96□□□□□ -0.49
BRIX1-203ENST00000510834 TTC38Q5R3I4 469 aa11.96□□□□□ -0.49
BRIX1-203ENST00000510834 USP17L1Q7RTZ2 530 aa11.96□□□□□ -0.49
BRIX1-203ENST00000510834 DAGLAQ9Y4D2 1042 aa11.96□□□□□ -0.49
BRIX1-203ENST00000510834 MYH4Q9Y623 1939 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 ALDH1B1P30837 517 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 CDK8P49336 464 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 GTF2IP78347 998 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 SPECC1Q5M775 1068 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 KANK3Q6NY19 840 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 C10orf71Q711Q0 1435 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 FAM177A1Q8N128 213 aaPredicted RBP11.96□□□□□ -0.5
BRIX1-203ENST00000510834 NEDD1Q8NHV4 660 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 EYA3Q99504 573 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 CSRNP2Q9H175 543 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 MAD2L2Q9UI95 211 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 PYCARDQ9ULZ3 195 aa11.96□□□□□ -0.5
BRIX1-203ENST00000510834 APBA3O96018 575 aa11.95□□□□□ -0.5
BRIX1-203ENST00000510834 POSTNQ15063 836 aa11.95□□□□□ -0.5
BRIX1-203ENST00000510834 TMEM47Q9BQJ4 181 aa11.95□□□□□ -0.5
BRIX1-203ENST00000510834 LZTS2Q9BRK4 669 aa11.95□□□□□ -0.5
BRIX1-203ENST00000510834 STX8Q9UNK0 236 aa11.95□□□□□ -0.5
BRIX1-203ENST00000510834 PARP3Q9Y6F1 533 aa11.95□□□□□ -0.5
BRIX1-203ENST00000510834 POLR2DO15514 142 aaKnown RBP11.94□□□□□ -0.5
BRIX1-203ENST00000510834 TPM2P07951 284 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 MMP10P09238 476 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 ATP2C1P98194 919 aaPredicted RBP11.94□□□□□ -0.5
BRIX1-203ENST00000510834 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
BRIX1-203ENST00000510834 NCAPHQ15003 741 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 DPP8Q6V1X1 898 aaPredicted RBP11.94□□□□□ -0.5
BRIX1-203ENST00000510834 CCDC148Q8NFR7 591 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 MASTLQ96GX5 879 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 CCDC34Q96HJ3 373 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 ZC3H12CQ9C0D7 883 aaKnown RBP11.94□□□□□ -0.5
BRIX1-203ENST00000510834 NRBP1Q9UHY1 535 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 PALM3A6NDB9 673 aaPredicted RBP11.94□□□□□ -0.5
BRIX1-203ENST00000510834 RIMBP2O15034 1052 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 ACTN4O43707 911 aaKnown RBP11.94□□□□□ -0.5
BRIX1-203ENST00000510834 NEMFO60524 1076 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 MYL5Q02045 173 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 NT5DC1Q5TFE4 455 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 OLFM4Q6UX06 510 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 STAG2Q8N3U4 1231 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 DAGLBQ8NCG7 672 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 PCDHA5Q9Y5H7 936 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 SCN9AQ15858 1988 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 SLX4Q8IY92 1834 aa11.94□□□□□ -0.5
BRIX1-203ENST00000510834 MYO1BO43795 1136 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 CCDC144BQ3MJ40 725 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 GALNT17Q6IS24 598 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 PIK3AP1Q6ZUJ8 805 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 BLIDQ8IZY5 108 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 TRIML1Q8N9V2 468 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 SPZ1Q9BXG8 430 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 TMX4Q9H1E5 349 aaPredicted RBP11.93□□□□□ -0.5
BRIX1-203ENST00000510834 SERTAD1Q9UHV2 236 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 PCDHA4Q9UN74 947 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 R3HCC1Q9Y3T6 440 aaKnown RBP11.93□□□□□ -0.5
BRIX1-203ENST00000510834 SIPA1L1O43166 1804 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 WNT7AO00755 349 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 NOVP48745 357 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 NOM1Q5C9Z4 860 aaKnown RBP11.93□□□□□ -0.5
BRIX1-203ENST00000510834 C17orf53Q8N3J3 647 aaPredicted RBP11.93□□□□□ -0.5
BRIX1-203ENST00000510834 GPKOWQ92917 476 aaPredicted RBP eCLIP11.93□□□□□ -0.5
BRIX1-203ENST00000510834 PSME4Q14997 1843 aa11.93□□□□□ -0.5
BRIX1-203ENST00000510834 FOXN1O15353 648 aa11.92□□□□□ -0.5
BRIX1-203ENST00000510834 TOP1P11387 765 aaKnown RBP11.92□□□□□ -0.5
BRIX1-203ENST00000510834 ZNF174Q15697 407 aa11.92□□□□□ -0.5
BRIX1-203ENST00000510834 FOXP4Q8IVH2 680 aaPredicted RBP11.92□□□□□ -0.5
BRIX1-203ENST00000510834 CERS5Q8N5B7 392 aa11.92□□□□□ -0.5
BRIX1-203ENST00000510834 SMARCE1Q969G3 411 aa11.92□□□□□ -0.5
BRIX1-203ENST00000510834 DACH1Q9UI36 760 aa11.92□□□□□ -0.5
BRIX1-203ENST00000510834 MAN1B1Q9UKM7 699 aa11.92□□□□□ -0.5
BRIX1-203ENST00000510834 MYO3BQ8WXR4 1341 aa11.92□□□□□ -0.5
BRIX1-203ENST00000510834 CYTH3O43739 400 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms