RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 HOXC10Q9NYD6 342 aa20.46■□□□□ 0.87
CLDND1-221ENST00000510541 CCDC178Q5BJE1 867 aa20.45■□□□□ 0.86
CLDND1-221ENST00000510541 FBXO46Q6PJ61 603 aaPredicted RBP20.45■□□□□ 0.86
CLDND1-221ENST00000510541 MFSD6Q6ZSS7 791 aa20.45■□□□□ 0.86
CLDND1-221ENST00000510541 MB21D1Q8N884 522 aa20.45■□□□□ 0.86
CLDND1-221ENST00000510541 IL25Q9H293 177 aa20.45■□□□□ 0.86
CLDND1-221ENST00000510541 ADAMTS5Q9UNA0 930 aa20.45■□□□□ 0.86
CLDND1-221ENST00000510541 RABGAP1Q9Y3P9 1069 aa20.45■□□□□ 0.86
CLDND1-221ENST00000510541 HOXD10P28358 340 aa20.44■□□□□ 0.86
CLDND1-221ENST00000510541 HERVK_113P62684 666 aa20.44■□□□□ 0.86
CLDND1-221ENST00000510541 TFAP4Q01664 338 aa20.44■□□□□ 0.86
CLDND1-221ENST00000510541 OTOP1Q7RTM1 612 aa20.44■□□□□ 0.86
CLDND1-221ENST00000510541 CEP95Q96GE4 821 aa20.44■□□□□ 0.86
CLDND1-221ENST00000510541 NBPF3Q9H094 633 aa20.44■□□□□ 0.86
CLDND1-221ENST00000510541 CNNM2Q9H8M5 875 aa20.44■□□□□ 0.86
CLDND1-221ENST00000510541 U3KPZ7 1027 aaPredicted RBP20.44■□□□□ 0.86
CLDND1-221ENST00000510541 TSPY2A6NKD2 308 aa20.43■□□□□ 0.86
CLDND1-221ENST00000510541 EPB41L2O43491 1005 aaKnown RBP20.43■□□□□ 0.86
CLDND1-221ENST00000510541 PLA2G6O60733 806 aa20.43■□□□□ 0.86
CLDND1-221ENST00000510541 CTDSPL2Q05D32 466 aa20.43■□□□□ 0.86
CLDND1-221ENST00000510541 COG2Q14746 738 aa20.43■□□□□ 0.86
CLDND1-221ENST00000510541 TNS4Q8IZW8 715 aa20.43■□□□□ 0.86
CLDND1-221ENST00000510541 P2RX7Q99572 595 aaKnown RBP20.43■□□□□ 0.86
CLDND1-221ENST00000510541 ESYT1Q9BSJ8 1104 aa20.43■□□□□ 0.86
CLDND1-221ENST00000510541 EFCC1Q9HA90 598 aa20.43■□□□□ 0.86
CLDND1-221ENST00000510541 TACC3Q9Y6A5 838 aa20.43■□□□□ 0.86
CLDND1-221ENST00000510541 RLFQ13129 1914 aa20.43■□□□□ 0.86
CLDND1-221ENST00000510541 PRDM1O75626 825 aa20.42■□□□□ 0.86
CLDND1-221ENST00000510541 RCSD1Q6JBY9 416 aa20.42■□□□□ 0.86
CLDND1-221ENST00000510541 CASC1Q6TDU7 716 aa20.42■□□□□ 0.86
CLDND1-221ENST00000510541 ANKS1AQ92625 1134 aa20.42■□□□□ 0.86
CLDND1-221ENST00000510541 ESR2Q92731 530 aa20.42■□□□□ 0.86
CLDND1-221ENST00000510541 IL17RBQ9NRM6 502 aa20.42■□□□□ 0.86
CLDND1-221ENST00000510541 CPA4Q9UI42 421 aa20.42■□□□□ 0.86
CLDND1-221ENST00000510541 FDX1P10109 184 aa20.41■□□□□ 0.86
CLDND1-221ENST00000510541 DGKZQ13574 1117 aa20.41■□□□□ 0.86
CLDND1-221ENST00000510541 CD99L2Q8TCZ2 262 aa20.41■□□□□ 0.86
CLDND1-221ENST00000510541 GMCL1Q96IK5 515 aa20.41■□□□□ 0.86
CLDND1-221ENST00000510541 MTA3Q9BTC8 594 aa20.41■□□□□ 0.86
CLDND1-221ENST00000510541 KRT23Q9C075 422 aa20.41■□□□□ 0.86
CLDND1-221ENST00000510541 MCOLN1Q9GZU1 580 aa20.41■□□□□ 0.86
CLDND1-221ENST00000510541 RPAP3Q9H6T3 665 aaPredicted RBP20.41■□□□□ 0.86
CLDND1-221ENST00000510541 RBPJLQ9UBG7 517 aa20.41■□□□□ 0.86
CLDND1-221ENST00000510541 MYH4Q9Y623 1939 aa20.41■□□□□ 0.86
CLDND1-221ENST00000510541 F5H6K3 240 aa20.4■□□□□ 0.86
CLDND1-221ENST00000510541 CDC45O75419 566 aa20.4■□□□□ 0.86
CLDND1-221ENST00000510541 FCGRTP55899 365 aa20.4■□□□□ 0.86
CLDND1-221ENST00000510541 KLRC3Q07444 240 aa20.4■□□□□ 0.86
CLDND1-221ENST00000510541 DGKHQ86XP1 1220 aa20.4■□□□□ 0.86
CLDND1-221ENST00000510541 TBC1D10CQ8IV04 446 aa20.4■□□□□ 0.86
CLDND1-221ENST00000510541 GPRC5AQ8NFJ5 357 aa20.4■□□□□ 0.86
CLDND1-221ENST00000510541 CLIP2Q9UDT6 1046 aa20.4■□□□□ 0.86
CLDND1-221ENST00000510541 PTPN22Q9Y2R2 807 aa20.4■□□□□ 0.86
CLDND1-221ENST00000510541 MGAMO43451 1857 aa20.39■□□□□ 0.86
CLDND1-221ENST00000510541 PARP14Q460N5 1801 aa20.39■□□□□ 0.86
CLDND1-221ENST00000510541 A0A0G2JMZ2 1700 aa20.39■□□□□ 0.86
CLDND1-221ENST00000510541 SPDYE16A6NNV3 312 aaPredicted RBP20.39■□□□□ 0.85
CLDND1-221ENST00000510541 RANBP6O60518 1105 aaKnown RBP20.39■□□□□ 0.85
CLDND1-221ENST00000510541 DSG3P32926 999 aa20.39■□□□□ 0.85
CLDND1-221ENST00000510541 PSMC4P43686 418 aa20.39■□□□□ 0.85
CLDND1-221ENST00000510541 IRF5Q13568 498 aa20.39■□□□□ 0.85
CLDND1-221ENST00000510541 KIAA1755Q5JYT7 1200 aa20.39■□□□□ 0.85
CLDND1-221ENST00000510541 KIAA1211Q6ZU35 1233 aa20.39■□□□□ 0.85
CLDND1-221ENST00000510541 ANKRD13CQ8N6S4 541 aa20.39■□□□□ 0.85
CLDND1-221ENST00000510541 HTTP42858 3142 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 MAPK4P31152 587 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 ERVK-9P63128 1117 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 ERVK-24P63145 666 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 CCNA1P78396 465 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 PTH1RQ03431 593 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 FAM47AQ5JRC9 791 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 POTEEQ6S8J3 1075 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 IQCA1Q86XH1 822 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 CLEC10AQ8IUN9 316 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 SHCBP1Q8NEM2 672 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 TRIM47Q96LD4 638 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 LSG1Q9H089 658 aaKnown RBP20.38■□□□□ 0.85
CLDND1-221ENST00000510541 SRRDQ9UH36 339 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 TRIM17Q9Y577 477 aa20.38■□□□□ 0.85
CLDND1-221ENST00000510541 ATP2A1O14983 1001 aa20.37■□□□□ 0.85
CLDND1-221ENST00000510541 NDUFB10O96000 172 aa20.37■□□□□ 0.85
CLDND1-221ENST00000510541 CYP21A2P08686 494 aa20.37■□□□□ 0.85
CLDND1-221ENST00000510541 TOP1P11387 765 aaKnown RBP20.37■□□□□ 0.85
CLDND1-221ENST00000510541 HAND2P61296 217 aa20.37■□□□□ 0.85
CLDND1-221ENST00000510541 CAP1Q01518 475 aa20.37■□□□□ 0.85
CLDND1-221ENST00000510541 ZYXQ15942 572 aaKnown RBP20.37■□□□□ 0.85
CLDND1-221ENST00000510541 TSGA10IPQ3SY00 556 aa20.37■□□□□ 0.85
CLDND1-221ENST00000510541 CTGFP29279 349 aa20.36■□□□□ 0.85
CLDND1-221ENST00000510541 COPB2P35606 906 aa20.36■□□□□ 0.85
CLDND1-221ENST00000510541 NECTIN1Q15223 517 aa20.36■□□□□ 0.85
CLDND1-221ENST00000510541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.36■□□□□ 0.85
CLDND1-221ENST00000510541 PRPF38AQ8NAV1 312 aaKnown RBP20.36■□□□□ 0.85
CLDND1-221ENST00000510541 ARMC5Q96C12 935 aa20.36■□□□□ 0.85
CLDND1-221ENST00000510541 ABHD8Q96I13 439 aa20.36■□□□□ 0.85
CLDND1-221ENST00000510541 TXNRD2Q9NNW7 524 aa20.36■□□□□ 0.85
CLDND1-221ENST00000510541 INCENPQ9NQS7 918 aa20.36■□□□□ 0.85
CLDND1-221ENST00000510541 FEM1BQ9UK73 627 aa20.36■□□□□ 0.85
CLDND1-221ENST00000510541 PPP1R9AQ9ULJ8 1098 aa20.36■□□□□ 0.85
CLDND1-221ENST00000510541 NEDD4P46934 1319 aa20.35■□□□□ 0.85
CLDND1-221ENST00000510541 CNMDO75829 334 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms