RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 RAD21O60216 631 aa17.73■□□□□ 0.43
UBE2D3-228ENST00000508974 CYP2B6P20813 491 aa17.73■□□□□ 0.43
UBE2D3-228ENST00000508974 LRRFIP1Q32MZ4 808 aaKnown RBP17.73■□□□□ 0.43
UBE2D3-228ENST00000508974 WDR78Q5VTH9 848 aa17.73■□□□□ 0.43
UBE2D3-228ENST00000508974 SHISA4Q96DD7 197 aa17.73■□□□□ 0.43
UBE2D3-228ENST00000508974 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
UBE2D3-228ENST00000508974 RLFQ13129 1914 aa17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 MYH4Q9Y623 1939 aa17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 CNMDO75829 334 aa17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 CCDC129Q6ZRS4 1044 aa17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 SIAH1Q8IUQ4 282 aa17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 PXYLP1Q8TE99 480 aa17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 GTF3C2Q8WUA4 911 aaPredicted RBP17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 CCDC17Q96LX7 622 aa17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 GJD2Q9UKL4 321 aa17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 A0A0G2JMZ2 1700 aa17.72■□□□□ 0.43
UBE2D3-228ENST00000508974 SPDYE16A6NNV3 312 aaPredicted RBP17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 IGHDP01880 384 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 EEF2P13639 858 aaKnown RBP17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 GNAT2P19087 354 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 MAPK4P31152 587 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 PDE1AP54750 535 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 IRX6P78412 446 aaPredicted RBP17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 TRIM32Q13049 653 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 SBK1Q52WX2 424 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 ZMYM1Q5SVZ6 1142 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 GPR142Q7Z601 462 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 RWDD1Q9H446 243 aaPredicted RBP17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 MKNK2Q9HBH9 465 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 BTBD7Q9P203 1132 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 RABGAP1Q9Y3P9 1069 aa17.71■□□□□ 0.43
UBE2D3-228ENST00000508974 PRDM1O75626 825 aa17.7■□□□□ 0.42
UBE2D3-228ENST00000508974 GJB1P08034 283 aa17.7■□□□□ 0.42
UBE2D3-228ENST00000508974 RASA1P20936 1047 aa17.7■□□□□ 0.42
UBE2D3-228ENST00000508974 PRPF38BQ5VTL8 546 aaKnown RBP17.7■□□□□ 0.42
UBE2D3-228ENST00000508974 GIMAP6Q6P9H5 292 aa17.7■□□□□ 0.42
UBE2D3-228ENST00000508974 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
UBE2D3-228ENST00000508974 NUDT12Q9BQG2 462 aa17.7■□□□□ 0.42
UBE2D3-228ENST00000508974 SH2D4AQ9H788 454 aa17.7■□□□□ 0.42
UBE2D3-228ENST00000508974 VCPKMTQ9H867 229 aa17.7■□□□□ 0.42
UBE2D3-228ENST00000508974 TMX2Q9Y320 296 aa17.7■□□□□ 0.42
UBE2D3-228ENST00000508974 ROBO3Q96MS0 1386 aa17.69■□□□□ 0.42
UBE2D3-228ENST00000508974 PATL2C9JE40 543 aaKnown RBP17.69■□□□□ 0.42
UBE2D3-228ENST00000508974 HMGCRP04035 888 aa17.69■□□□□ 0.42
UBE2D3-228ENST00000508974 GJA8P48165 433 aa17.69■□□□□ 0.42
UBE2D3-228ENST00000508974 PLEKHH3Q7Z736 793 aa17.69■□□□□ 0.42
UBE2D3-228ENST00000508974 U2AF1L4Q8WU68 220 aaKnown RBP17.69■□□□□ 0.42
UBE2D3-228ENST00000508974 TRIB2Q92519 343 aa17.69■□□□□ 0.42
UBE2D3-228ENST00000508974 DEFB118Q96PH6 123 aa17.69■□□□□ 0.42
UBE2D3-228ENST00000508974 STAP2Q9UGK3 403 aa17.69■□□□□ 0.42
UBE2D3-228ENST00000508974 FLOT1O75955 427 aa17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 CCNA1P78396 465 aa17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 AAMPQ13685 434 aa17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 COG2Q14746 738 aa17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 NKX2-3Q8TAU0 364 aa17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 SOCS4Q8WXH5 440 aa17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 EVI5LQ96CN4 794 aa17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 NAPBQ9H115 298 aa17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 KANSL2Q9H9L4 492 aa17.68■□□□□ 0.42
UBE2D3-228ENST00000508974 TRIM6-TRIM34B2RNG4 842 aa17.67■□□□□ 0.42
UBE2D3-228ENST00000508974 TFRCP02786 760 aaKnown RBP17.67■□□□□ 0.42
UBE2D3-228ENST00000508974 PLS1Q14651 629 aa17.67■□□□□ 0.42
UBE2D3-228ENST00000508974 CCL14Q16627 93 aa17.67■□□□□ 0.42
UBE2D3-228ENST00000508974 LBX2Q6XYB7 198 aa17.67■□□□□ 0.42
UBE2D3-228ENST00000508974 SMC5Q8IY18 1101 aa17.67■□□□□ 0.42
UBE2D3-228ENST00000508974 LPAR1Q92633 364 aa17.67■□□□□ 0.42
UBE2D3-228ENST00000508974 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.67■□□□□ 0.422e-17■■□□□ 14.3
UBE2D3-228ENST00000508974 SGPL1O95470 568 aa17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 ZKSCAN1P17029 563 aaPredicted RBP17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 RGS2P41220 211 aa17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 MORN1Q5T089 497 aa17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 CHD1LQ86WJ1 897 aa17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 ZNF444Q8N0Y2 327 aaPredicted RBP17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 RILPL2Q969X0 211 aa17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 ATG4CQ96DT6 458 aa17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 GOPCQ9HD26 462 aa17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 FBXO28Q9NVF7 368 aa17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 HOXC10Q9NYD6 342 aa17.66■□□□□ 0.42
UBE2D3-228ENST00000508974 WDR46O15213 610 aaKnown RBP17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 PRKAR2AP13861 404 aaKnown RBP17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 CTDSPL2Q05D32 466 aa17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 PPARAQ07869 468 aa17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 FAM83BQ5T0W9 1011 aa17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 VPS53Q5VIR6 699 aa17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 FAM227BQ96M60 508 aa17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 NUP88Q99567 741 aaPredicted RBP17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 APBA2Q99767 749 aa17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 MOV10L1Q9BXT6 1211 aaKnown RBP17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 PAK6Q9NQU5 681 aaPredicted RBP17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 IVNS1ABPQ9Y6Y0 642 aa17.65■□□□□ 0.42
UBE2D3-228ENST00000508974 A0A0D9SFI3 127 aa17.64■□□□□ 0.41
UBE2D3-228ENST00000508974 FOXP2O15409 715 aa17.64■□□□□ 0.41
UBE2D3-228ENST00000508974 FARP2O94887 1054 aaPredicted RBP17.64■□□□□ 0.41
UBE2D3-228ENST00000508974 MAP2K5Q13163 448 aa17.64■□□□□ 0.41
UBE2D3-228ENST00000508974 FAM47AQ5JRC9 791 aa17.64■□□□□ 0.41
UBE2D3-228ENST00000508974 USP6NLQ92738 828 aa17.64■□□□□ 0.41
UBE2D3-228ENST00000508974 SPATC1LQ9H0A9 340 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms