RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 USP17L17D6RBQ6 530 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 USP17L19D6RCP7 530 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 USP17L20D6RJB6 530 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 IGHA2P01877 340 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 CHGBP05060 677 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 CYP2D6P10635 497 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 RGS2P41220 211 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 GABPAQ06546 454 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 USP17L24Q0WX57 530 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 MAP2K5Q13163 448 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 PDE3AQ14432 1141 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 SEPT2Q15019 361 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 ABCB5Q2M3G0 1257 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 CERKLQ49MI3 558 aaPredicted RBP7.13□□□□□ -1.27
GYPB-205ENST00000505583 CATSPERGQ6ZRH7 1159 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 AACSQ86V21 672 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 CLEC10AQ8IUN9 316 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 SLC44A5Q8NCS7 719 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 TRPV1Q8NER1 839 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 NPLOC4Q8TAT6 608 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 EDC3Q96F86 508 aaKnown RBP7.13□□□□□ -1.27
GYPB-205ENST00000505583 FEZ1Q99689 392 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 APBA2Q99767 749 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 KIAA1683Q9H0B3 1180 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 EHD4Q9H223 541 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 GINM1Q9NU53 330 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 RABGAP1Q9Y3P9 1069 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 ZNFX1Q9P2E3 1918 aaKnown RBP7.13□□□□□ -1.27
GYPB-205ENST00000505583 ZNF236Q9UL36 1845 aa7.13□□□□□ -1.27
GYPB-205ENST00000505583 TCRBV5S4A2TA0A5A2 114 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 DLL1O00548 723 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 PDE6AP16499 860 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 PTPREP23469 700 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 CYP2C19P33261 490 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 HNRNPUQ00839 825 aaKnown RBP eCLIP7.12□□□□□ -1.27
GYPB-205ENST00000505583 MDM2Q00987 491 aaPredicted RBP7.12□□□□□ -1.27
GYPB-205ENST00000505583 WDR78Q5VTH9 848 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 SIAH1Q8IUQ4 282 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 CCAR1Q8IX12 1150 aaKnown RBP7.12□□□□□ -1.27
GYPB-205ENST00000505583 SIRT2Q8IXJ6 389 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 FTSJ3Q8IY81 847 aaKnown RBP7.12□□□□□ -1.27
GYPB-205ENST00000505583 TDHQ8IZJ6 230 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 LCORLQ8N3X6 602 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 DEFB123Q8N688 67 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 SLC17A8Q8NDX2 589 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 SDR42E1Q8WUS8 393 aa7.12□□□□□ -1.27
GYPB-205ENST00000505583 RPAP3Q9H6T3 665 aaPredicted RBP7.12□□□□□ -1.27
GYPB-205ENST00000505583 MYH7P12883 1935 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 ZNF532Q9HCE3 1301 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 CYP2D7A0A087X1C5 515 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 MAGEB6P1A0A0J9YX57 407 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 SLC15A5A6NIM6 579 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 APBB1O00213 710 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 PRKAB2O43741 272 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 IGSF3O75054 1194 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 COBLO75128 1261 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 HOXC6P09630 235 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 ATN1P54259 1190 aaPredicted RBP7.11□□□□□ -1.27
GYPB-205ENST00000505583 MAP3K12Q12852 859 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 GRB14Q14449 540 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 LRIT3Q3SXY7 679 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 SLC9C2Q5TAH2 1124 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 ANO1Q5XXA6 986 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 LBX2Q6XYB7 198 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 TTC6Q86TZ1 520 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 TRMT44Q8IYL2 757 aaKnown RBP7.11□□□□□ -1.27
GYPB-205ENST00000505583 RHPN1Q8TCX5 695 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 GTF3C2Q8WUA4 911 aaPredicted RBP7.11□□□□□ -1.27
GYPB-205ENST00000505583 DYNLL2Q96FJ2 89 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 PHF12Q96QT6 1004 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 MOV10L1Q9BXT6 1211 aaKnown RBP7.11□□□□□ -1.27
GYPB-205ENST00000505583 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
GYPB-205ENST00000505583 SENP6Q9GZR1 1112 aaPredicted RBP7.11□□□□□ -1.27
GYPB-205ENST00000505583 BCL11AQ9H165 835 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 DCP1AQ9NPI6 582 aaPredicted RBP7.11□□□□□ -1.27
GYPB-205ENST00000505583 MTMR10Q9NXD2 777 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 MCM9Q9NXL9 1143 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 DDX20Q9UHI6 824 aaKnown RBP7.11□□□□□ -1.27
GYPB-205ENST00000505583 PLXNA1Q9UIW2 1896 aa7.11□□□□□ -1.27
GYPB-205ENST00000505583 SMCHD1A6NHR9 2005 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 GOLIM4O00461 696 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 MPHOSPH10O00566 681 aaKnown RBP7.1□□□□□ -1.27
GYPB-205ENST00000505583 POLR3DP05423 398 aaPredicted RBP7.1□□□□□ -1.27
GYPB-205ENST00000505583 CYBAP13498 195 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 AKR1B1P15121 316 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 CNGA1P29973 690 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 USP14P54578 494 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 CCNA1P78396 465 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 ATP2B2Q01814 1243 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 PRAMEF19Q5SWL8 479 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 GJC2Q5T442 439 aaPredicted RBP7.1□□□□□ -1.27
GYPB-205ENST00000505583 DNAJC2Q99543 621 aaKnown RBP7.1□□□□□ -1.27
GYPB-205ENST00000505583 ARMT1Q9H993 441 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 CWC22Q9HCG8 908 aaKnown RBP7.1□□□□□ -1.27
GYPB-205ENST00000505583 CABP5Q9NP86 173 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 GTF3C3Q9Y5Q9 886 aa7.1□□□□□ -1.27
GYPB-205ENST00000505583 TULP1O00294 542 aaPredicted RBP7.09□□□□□ -1.27
GYPB-205ENST00000505583 GLRX3O76003 335 aaKnown RBP7.09□□□□□ -1.27
GYPB-205ENST00000505583 ERCC3P19447 782 aa7.09□□□□□ -1.27
GYPB-205ENST00000505583 ADORA2AP29274 412 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms