RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 DNAI1Q9UI46 699 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 GGA1Q9UJY5 639 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 MYH7P12883 1935 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 TMEM232C9JQI7 657 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 ZNF287Q9HBT7 754 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 CALCOCO1Q9P1Z2 691 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 SHANK3Q9BYB0 1731 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 CNTNAP4Q9C0A0 1308 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 MPHOSPH10O00566 681 aaKnown RBP11.05□□□□□ -0.64
CSF1R-203ENST00000504875 IKBKBO14920 756 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 URI1O94763 535 aaPredicted RBP11.05□□□□□ -0.64
CSF1R-203ENST00000504875 UBA7P41226 1012 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 MFSD14BQ5SR56 506 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 MLKLQ8NB16 471 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 FEZ1Q99689 392 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 SEC63Q9UGP8 760 aaKnown RBP11.05□□□□□ -0.64
CSF1R-203ENST00000504875 HPSEQ9Y251 543 aa11.05□□□□□ -0.64
CSF1R-203ENST00000504875 ABCA3Q99758 1704 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 PAPPAQ13219 1627 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 CALML3P27482 149 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 STAT6P42226 847 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 BTDP43251 543 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 NAPAP54920 295 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 ADKP55263 362 aaKnown RBP11.04□□□□□ -0.64
CSF1R-203ENST00000504875 GRAPQ13588 217 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 EARS2Q5JPH6 523 aaKnown RBP11.04□□□□□ -0.64
CSF1R-203ENST00000504875 NBPF11Q86T75 865 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 GRAPLQ8TC17 118 aaPredicted RBP11.04□□□□□ -0.64
CSF1R-203ENST00000504875 PCMTD1Q96MG8 357 aaPredicted RBP11.04□□□□□ -0.64
CSF1R-203ENST00000504875 TROAPQ12815 778 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 NAA30Q147X3 362 aaPredicted RBP11.04□□□□□ -0.64
CSF1R-203ENST00000504875 IQUBQ8NA54 791 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 SAMSN1Q9NSI8 373 aaKnown RBP11.04□□□□□ -0.64
CSF1R-203ENST00000504875 XDHP47989 1333 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 CCT6AP40227 531 aaKnown RBP11.04□□□□□ -0.64
CSF1R-203ENST00000504875 RBM5P52756 815 aaKnown RBP eCLIP11.04□□□□□ -0.64
CSF1R-203ENST00000504875 FOXP4Q8IVH2 680 aaPredicted RBP11.04□□□□□ -0.64
CSF1R-203ENST00000504875 SECISBP2LQ93073 1101 aaKnown RBP11.04□□□□□ -0.64
CSF1R-203ENST00000504875 ANAPC4Q9UJX5 808 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 CTNND2Q9UQB3 1225 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 NHSL1Q5SYE7 1610 aa11.04□□□□□ -0.64
CSF1R-203ENST00000504875 CCP110O43303 1012 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 PCP11498 1178 aaKnown RBP11.03□□□□□ -0.64
CSF1R-203ENST00000504875 GTF2F1P35269 517 aaKnown RBP eCLIP11.03□□□□□ -0.64
CSF1R-203ENST00000504875 GNAQP50148 359 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 CCZ1BP86790 482 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 CCZ1P86791 482 aaPredicted RBP11.03□□□□□ -0.64
CSF1R-203ENST00000504875 ARMCX5Q6P1M9 558 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 STAG2Q8N3U4 1231 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 MTA3Q9BTC8 594 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 TUBE1Q9UJT0 475 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 NWD2Q9ULI1 1742 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 KIF2AO00139 706 aaPredicted RBP11.03□□□□□ -0.64
CSF1R-203ENST00000504875 GTF2IP78347 998 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 INF2Q27J81 1249 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 SLC10A5Q5PT55 438 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 BLIDQ8IZY5 108 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 BPIFA3Q9BQP9 254 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 SERPINB2P05120 415 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 ZSCAN29Q8IWY8 852 aaPredicted RBP11.03□□□□□ -0.64
CSF1R-203ENST00000504875 ZNF384Q8TF68 577 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 RBM17Q96I25 401 aaKnown RBP11.03□□□□□ -0.64
CSF1R-203ENST00000504875 EYA3Q99504 573 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 LEMD3Q9Y2U8 911 aa11.03□□□□□ -0.64
CSF1R-203ENST00000504875 SYNRGQ9UMZ2 1314 aa11.02□□□□□ -0.64
CSF1R-203ENST00000504875 N4BP3O15049 544 aa11.02□□□□□ -0.64
CSF1R-203ENST00000504875 GABPB1Q06547 395 aaPredicted RBP11.02□□□□□ -0.64
CSF1R-203ENST00000504875 NCAPHQ15003 741 aa11.02□□□□□ -0.64
CSF1R-203ENST00000504875 PKN1Q16512 942 aa11.02□□□□□ -0.64
CSF1R-203ENST00000504875 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.64
CSF1R-203ENST00000504875 SAMD1Q6SPF0 538 aaPredicted RBP11.02□□□□□ -0.64
CSF1R-203ENST00000504875 DTHD1Q6ZMT9 781 aa11.02□□□□□ -0.64
CSF1R-203ENST00000504875 CCDC47Q96A33 483 aaKnown RBP11.02□□□□□ -0.64
CSF1R-203ENST00000504875 MYH14Q7Z406 1995 aaKnown RBP11.02□□□□□ -0.65
CSF1R-203ENST00000504875 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
CSF1R-203ENST00000504875 RCAN1P53805 252 aa11.02□□□□□ -0.65
CSF1R-203ENST00000504875 FMR1Q06787 632 aaKnown RBP eCLIP11.02□□□□□ -0.65
CSF1R-203ENST00000504875 AMIGO3Q86WK7 504 aa11.02□□□□□ -0.65
CSF1R-203ENST00000504875 SEPT12Q8IYM1 358 aa11.02□□□□□ -0.65
CSF1R-203ENST00000504875 CCDC148Q8NFR7 591 aa11.02□□□□□ -0.65
CSF1R-203ENST00000504875 BAG1Q99933 345 aaPredicted RBP11.02□□□□□ -0.65
CSF1R-203ENST00000504875 ZSCAN12O43309 604 aa11.02□□□□□ -0.65
CSF1R-203ENST00000504875 VEGFAP15692 232 aaPredicted RBP11.02□□□□□ -0.65
CSF1R-203ENST00000504875 GPSM2P81274 684 aa11.02□□□□□ -0.65
CSF1R-203ENST00000504875 KARSQ15046 597 aaKnown RBP11.02□□□□□ -0.65
CSF1R-203ENST00000504875 UBA5Q9GZZ9 404 aa11.02□□□□□ -0.65
CSF1R-203ENST00000504875 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.65
CSF1R-203ENST00000504875 KLRF2D3W0D1 207 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 ORC4O43929 436 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 TRIM37O94972 964 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 PARP1P09874 1014 aaKnown RBP11.01□□□□□ -0.65
CSF1R-203ENST00000504875 GNG11P61952 73 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 CCDC96Q2M329 555 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 SLF2Q8IX21 1173 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 KRT222Q8N1A0 295 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 CDK5RAP3Q96JB5 506 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 ZC3H12CQ9C0D7 883 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms