RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 ZNF341Q9BYN7 854 aa23.2■■□□□ 1.3
ACTN4-208ENST00000497637 MCM5P33992 734 aa23.19■■□□□ 1.3
ACTN4-208ENST00000497637 MAGEA10P43363 369 aaPredicted RBP23.19■■□□□ 1.3
ACTN4-208ENST00000497637 FGD1P98174 961 aa23.19■■□□□ 1.3
ACTN4-208ENST00000497637 RALYLQ86SE5 291 aaKnown RBP23.19■■□□□ 1.3
ACTN4-208ENST00000497637 UBE2OQ9C0C9 1292 aaKnown RBP23.19■■□□□ 1.3
ACTN4-208ENST00000497637 PFKFB2O60825 505 aa23.18■■□□□ 1.3
ACTN4-208ENST00000497637 ELNP15502 786 aa23.18■■□□□ 1.3
ACTN4-208ENST00000497637 PTMSP20962 102 aa23.18■■□□□ 1.3
ACTN4-208ENST00000497637 EVCP57679 992 aa23.18■■□□□ 1.3
ACTN4-208ENST00000497637 TRDNQ13061 729 aa23.18■■□□□ 1.3
ACTN4-208ENST00000497637 GIMAP6Q6P9H5 292 aa23.18■■□□□ 1.3
ACTN4-208ENST00000497637 TBC1D10CQ8IV04 446 aa23.18■■□□□ 1.3
ACTN4-208ENST00000497637 BRF1Q92994 677 aa23.18■■□□□ 1.3
ACTN4-208ENST00000497637 BAG4O95429 457 aaKnown RBP23.17■■□□□ 1.3
ACTN4-208ENST00000497637 PDIA4P13667 645 aaKnown RBP23.17■■□□□ 1.3
ACTN4-208ENST00000497637 CHMP4CQ96CF2 233 aa23.17■■□□□ 1.3
ACTN4-208ENST00000497637 LRRC2Q9BYS8 371 aa23.17■■□□□ 1.3
ACTN4-208ENST00000497637 TTC28Q96AY4 2481 aa23.17■■□□□ 1.3
ACTN4-208ENST00000497637 CXCL11O14625 94 aa23.16■■□□□ 1.3
ACTN4-208ENST00000497637 PRC1O43663 620 aa23.16■■□□□ 1.3
ACTN4-208ENST00000497637 LDHBP07195 334 aaKnown RBP23.16■■□□□ 1.3
ACTN4-208ENST00000497637 PRDX5P30044 214 aa23.16■■□□□ 1.3
ACTN4-208ENST00000497637 DYNLL1P63167 89 aaKnown RBP23.16■■□□□ 1.3
ACTN4-208ENST00000497637 GSTO1P78417 241 aa23.16■■□□□ 1.3
ACTN4-208ENST00000497637 GTF3C6Q969F1 213 aa23.16■■□□□ 1.3
ACTN4-208ENST00000497637 TEKT1Q969V4 418 aa23.16■■□□□ 1.3
ACTN4-208ENST00000497637 ZNF274Q96GC6 653 aaPredicted RBP23.16■■□□□ 1.3
ACTN4-208ENST00000497637 MRIQ9BWK5 157 aa23.16■■□□□ 1.3
ACTN4-208ENST00000497637 TNPO2O14787 897 aaKnown RBP23.15■■□□□ 1.3
ACTN4-208ENST00000497637 GJB2P29033 226 aa23.15■■□□□ 1.3
ACTN4-208ENST00000497637 TDO2P48775 406 aa23.15■■□□□ 1.3
ACTN4-208ENST00000497637 ANTXR2P58335 489 aa23.15■■□□□ 1.3
ACTN4-208ENST00000497637 MOGSQ13724 837 aa23.15■■□□□ 1.3
ACTN4-208ENST00000497637 DIS3LQ8TF46 1054 aaKnown RBP23.15■■□□□ 1.3
ACTN4-208ENST00000497637 ANAPC4Q9UJX5 808 aa23.15■■□□□ 1.3
ACTN4-208ENST00000497637 POTEB2H3BUK9 544 aa23.14■■□□□ 1.29
ACTN4-208ENST00000497637 LDHCP07864 332 aa23.14■■□□□ 1.29
ACTN4-208ENST00000497637 CYP2C8P10632 490 aa23.14■■□□□ 1.29
ACTN4-208ENST00000497637 APOBRQ0VD83 1088 aa23.14■■□□□ 1.29
ACTN4-208ENST00000497637 AKNAD1Q5T1N1 836 aa23.14■■□□□ 1.29
ACTN4-208ENST00000497637 FASTKD5Q7L8L6 764 aaKnown RBP23.14■■□□□ 1.29
ACTN4-208ENST00000497637 DZIP1Q86YF9 867 aaKnown RBP23.14■■□□□ 1.29
ACTN4-208ENST00000497637 TBC1D22AQ8WUA7 517 aa23.14■■□□□ 1.29
ACTN4-208ENST00000497637 STAG1Q8WVM7 1258 aa23.14■■□□□ 1.29
ACTN4-208ENST00000497637 ZDHHC15Q96MV8 337 aa23.14■■□□□ 1.29
ACTN4-208ENST00000497637 LLPHQ9BRT6 129 aaKnown RBP23.14■■□□□ 1.29
ACTN4-208ENST00000497637 LAMA4Q16363 1823 aa23.13■■□□□ 1.29
ACTN4-208ENST00000497637 INPP5BP32019 993 aa23.13■■□□□ 1.29
ACTN4-208ENST00000497637 CACNB3P54284 484 aa23.13■■□□□ 1.29
ACTN4-208ENST00000497637 CHST3Q7LGC8 479 aa23.13■■□□□ 1.29
ACTN4-208ENST00000497637 COA7Q96BR5 231 aa23.13■■□□□ 1.29
ACTN4-208ENST00000497637 CRNKL1Q9BZJ0 848 aaKnown RBP23.13■■□□□ 1.29
ACTN4-208ENST00000497637 KRT23Q9C075 422 aa23.13■■□□□ 1.29
ACTN4-208ENST00000497637 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.13■■□□□ 1.29
ACTN4-208ENST00000497637 CNNM2Q9H8M5 875 aa23.13■■□□□ 1.29
ACTN4-208ENST00000497637 ZNF112Q9UJU3 913 aa23.13■■□□□ 1.29
ACTN4-208ENST00000497637 GOLGA6L22H0YM25 854 aa23.12■■□□□ 1.29
ACTN4-208ENST00000497637 SYN1P17600 705 aa23.12■■□□□ 1.29
ACTN4-208ENST00000497637 SYT1P21579 422 aa23.12■■□□□ 1.29
ACTN4-208ENST00000497637 PPP4CP60510 307 aa23.12■■□□□ 1.29
ACTN4-208ENST00000497637 GPAT2Q6NUI2 795 aa23.12■■□□□ 1.29
ACTN4-208ENST00000497637 MIGA2Q7L4E1 593 aa23.12■■□□□ 1.29
ACTN4-208ENST00000497637 RNF41Q9H4P4 317 aaPredicted RBP23.12■■□□□ 1.29
ACTN4-208ENST00000497637 SLC45A1Q9Y2W3 748 aa23.12■■□□□ 1.29
ACTN4-208ENST00000497637 STX6O43752 255 aa23.11■■□□□ 1.29
ACTN4-208ENST00000497637 PDIA3P30101 505 aaKnown RBP23.11■■□□□ 1.29
ACTN4-208ENST00000497637 CTDSPL2Q05D32 466 aa23.11■■□□□ 1.29
ACTN4-208ENST00000497637 PPARAQ07869 468 aa23.11■■□□□ 1.29
ACTN4-208ENST00000497637 STK3Q13188 491 aa23.11■■□□□ 1.29
ACTN4-208ENST00000497637 NOL9Q5SY16 702 aaKnown RBP23.11■■□□□ 1.29
ACTN4-208ENST00000497637 SDR42E1Q8WUS8 393 aa23.11■■□□□ 1.29
ACTN4-208ENST00000497637 TMEM87BQ96K49 555 aa23.11■■□□□ 1.29
ACTN4-208ENST00000497637 GUCD1Q96NT3 240 aa23.11■■□□□ 1.29
ACTN4-208ENST00000497637 C11orf49Q9H6J7 331 aa23.11■■□□□ 1.29
ACTN4-208ENST00000497637 TACC3Q9Y6A5 838 aa23.11■■□□□ 1.29
ACTN4-208ENST00000497637 MYH13Q9UKX3 1938 aa23.1■■□□□ 1.29
ACTN4-208ENST00000497637 MAST2Q6P0Q8 1798 aa23.1■■□□□ 1.29
ACTN4-208ENST00000497637 ZSCAN22P10073 491 aaPredicted RBP23.1■■□□□ 1.29
ACTN4-208ENST00000497637 PDCP20941 246 aa23.1■■□□□ 1.29
ACTN4-208ENST00000497637 SCRN1Q12765 414 aa23.1■■□□□ 1.29
ACTN4-208ENST00000497637 MFSD6Q6ZSS7 791 aa23.1■■□□□ 1.29
ACTN4-208ENST00000497637 CYB5R4Q7L1T6 521 aa23.1■■□□□ 1.29
ACTN4-208ENST00000497637 MTA3Q9BTC8 594 aa23.1■■□□□ 1.29
ACTN4-208ENST00000497637 ATP8A2Q9NTI2 1148 aa23.1■■□□□ 1.29
ACTN4-208ENST00000497637 NEDD4P46934 1319 aa23.09■■□□□ 1.29
ACTN4-208ENST00000497637 B4E1Z4 1266 aa23.09■■□□□ 1.29
ACTN4-208ENST00000497637 GRIK5Q16478 980 aa23.09■■□□□ 1.29
ACTN4-208ENST00000497637 CERS3Q8IU89 383 aa23.09■■□□□ 1.29
ACTN4-208ENST00000497637 SMARCC2Q8TAQ2 1214 aa23.09■■□□□ 1.29
ACTN4-208ENST00000497637 SYMPKQ92797 1274 aaKnown RBP23.09■■□□□ 1.29
ACTN4-208ENST00000497637 FAM163AQ96GL9 167 aaPredicted RBP23.09■■□□□ 1.29
ACTN4-208ENST00000497637 GPHNQ9NQX3 736 aaPredicted RBP23.09■■□□□ 1.29
ACTN4-208ENST00000497637 AATFQ9NY61 560 aaKnown RBP eCLIP23.09■■□□□ 1.29
ACTN4-208ENST00000497637 TAOK2Q9UL54 1235 aa23.09■■□□□ 1.29
ACTN4-208ENST00000497637 SH2B2O14492 632 aaPredicted RBP23.08■■□□□ 1.29
ACTN4-208ENST00000497637 PCP11498 1178 aaKnown RBP23.08■■□□□ 1.29
ACTN4-208ENST00000497637 SBK1Q52WX2 424 aa23.08■■□□□ 1.29
ACTN4-208ENST00000497637 APOBEC3HQ6NTF7 200 aaKnown RBP23.08■■□□□ 1.29
ACTN4-208ENST00000497637 SMCR8Q8TEV9 937 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms